RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NCR1YPL006W SGS1P35187 1447 aa6.81□□□□□ -1.32
NCR1YPL006W SPA2P23201 1466 aaKnown RBP6.66□□□□□ -1.34
NCR1YPL006W INO80P53115 1489 aa6.62□□□□□ -1.35
NCR1YPL006W SSN2P38931 1420 aa6.6□□□□□ -1.35
NCR1YPL006W TCB3Q03640 1545 aaKnown RBP6.45□□□□□ -1.38
NCR1YPL006W TY1B-DR4Q07793 1604 aa6.39□□□□□ -1.39
NCR1YPL006W DRS1P32892 752 aaKnown RBP6.34□□□□□ -1.39
NCR1YPL006W HSL1P34244 1518 aa6.29□□□□□ -1.4
NCR1YPL006W SPT6P23615 1451 aaKnown RBP6.25□□□□□ -1.41
NCR1YPL006W HIR3P47171 1648 aa6.19□□□□□ -1.42
NCR1YPL006W MON2P48563 1636 aaPredicted RBP6.17□□□□□ -1.42
NCR1YPL006W XRN1P22147 1528 aaKnown RBP6.16□□□□□ -1.42
NCR1YPL006W SWR1Q05471 1514 aa6.14□□□□□ -1.43
NCR1YPL006W REV3P14284 1504 aa6.09□□□□□ -1.43
NCR1YPL006W SIN3P22579 1536 aa6.08□□□□□ -1.44
NCR1YPL006W SKI3P17883 1432 aaKnown RBP6.08□□□□□ -1.44
NCR1YPL006W THO2P53552 1597 aaKnown RBP6.06□□□□□ -1.44
NCR1YPL006W SSK2P53599 1579 aa6.05□□□□□ -1.44
NCR1YPL006W CHD1P32657 1468 aa6.04□□□□□ -1.44
NCR1YPL006W MMS22Q06164 1454 aa6□□□□□ -1.45
NCR1YPL006W ESP1Q03018 1630 aa5.98□□□□□ -1.45
NCR1YPL006W TAF2P23255 1407 aa5.97□□□□□ -1.45
NCR1YPL006W MYO2P19524 1574 aaKnown RBP5.94□□□□□ -1.46
NCR1YPL006W POL1P13382 1468 aa5.93□□□□□ -1.46
NCR1YPL006W STU1P38198 1513 aa5.91□□□□□ -1.46
NCR1YPL006W ATG2P53855 1592 aa5.9□□□□□ -1.46
NCR1YPL006W YPK9Q12697 1472 aa5.89□□□□□ -1.47
NCR1YPL006W BUD4P47136 1447 aa5.88□□□□□ -1.47
NCR1YPL006W DNA2P38859 1522 aa5.86□□□□□ -1.47
NCR1YPL006W ECM5Q03214 1411 aa5.86□□□□□ -1.47
NCR1YPL006W YTA7P40340 1379 aa5.86□□□□□ -1.47
NCR1YPL006W BPT1P14772 1559 aa5.85□□□□□ -1.47
NCR1YPL006W KOG1P38873 1557 aa5.84□□□□□ -1.47
NCR1YPL006W PEP1P32319 1579 aa5.83□□□□□ -1.48
NCR1YPL006W UFD4P33202 1483 aa5.82□□□□□ -1.48
NCR1YPL006W YOR1P53049 1477 aa5.82□□□□□ -1.48
NCR1YPL006W SCC2Q04002 1493 aa5.82□□□□□ -1.48
NCR1YPL006W RKR1Q04781 1562 aa5.81□□□□□ -1.48
NCR1YPL006W TRM732Q03496 1420 aa5.8□□□□□ -1.48
NCR1YPL006W RPO31P04051 1460 aa5.79□□□□□ -1.48
NCR1YPL006W MYO4P32492 1471 aa5.79□□□□□ -1.48
NCR1YPL006W RSE1Q04693 1361 aaKnown RBP5.78□□□□□ -1.48
NCR1YPL006W SAS10Q12136 610 aaPredicted RBP5.77□□□□□ -1.49
NCR1YPL006W TOP2P06786 1428 aaKnown RBP5.76□□□□□ -1.49
NCR1YPL006W MDS3P53094 1487 aa5.76□□□□□ -1.49
NCR1YPL006W SMC4Q12267 1418 aa5.76□□□□□ -1.49
NCR1YPL006W YCF1P39109 1515 aaKnown RBP5.75□□□□□ -1.49
NCR1YPL006W IKI3Q06706 1349 aaKnown RBP5.74□□□□□ -1.49
NCR1YPL006W NUP170P38181 1502 aa5.74□□□□□ -1.49
NCR1YPL006W TY2B-LR1P0C2J3 1770 aa5.73□□□□□ -1.49
NCR1YPL006W TY2B-FP0CX63 1770 aa5.73□□□□□ -1.49
NCR1YPL006W TY2B-GR2P0CX64 1770 aa5.73□□□□□ -1.49
NCR1YPL006W TY2B-CP25384 1770 aa5.73□□□□□ -1.49
NCR1YPL006W TY2B-DR2Q03494 1770 aa5.73□□□□□ -1.49
NCR1YPL006W TY1B-DR1Q03855 1755 aa5.73□□□□□ -1.49
NCR1YPL006W TY2B-DR3Q07791 1770 aaKnown RBP5.73□□□□□ -1.49
NCR1YPL006W TY2B-OR1Q12113 1770 aa5.73□□□□□ -1.49
NCR1YPL006W TY2B-DR1Q12472 1770 aa5.73□□□□□ -1.49
NCR1YPL006W TY2B-OR2Q12501 1770 aa5.73□□□□□ -1.49
NCR1YPL006W TY1B-DR3Q99231 1755 aa5.73□□□□□ -1.49
NCR1YPL006W SNQ2P32568 1501 aaKnown RBP5.72□□□□□ -1.49
NCR1YPL006W TY2B-BQ12491 1770 aa5.68□□□□□ -1.5
NCR1YPL006W STH1P32597 1359 aa5.68□□□□□ -1.5
NCR1YPL006W SSM4P40318 1319 aa5.67□□□□□ -1.5
NCR1YPL006W TAF7Q05021 590 aa5.66□□□□□ -1.5
NCR1YPL006W SPP41P38904 1435 aa5.66□□□□□ -1.5
NCR1YPL006W MLP2P40457 1679 aa5.66□□□□□ -1.5
NCR1YPL006W PDR15Q04182 1529 aaKnown RBP5.65□□□□□ -1.5
NCR1YPL006W ULS1Q08562 1619 aa5.65□□□□□ -1.51
NCR1YPL006W GEA1P47102 1408 aaPredicted RBP5.64□□□□□ -1.51
NCR1YPL006W TY1B-HO13535 1793 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-DR5P0C2I2 1755 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-DR6P0C2I3 1755 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-LR2P0C2I5 1755 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-LR3P0C2I6 1755 aaKnown RBP5.63□□□□□ -1.51
NCR1YPL006W TY1B-PR1P0C2I9 1755 aaKnown RBP5.63□□□□□ -1.51
NCR1YPL006W TY1B-PR2P0C2J0 1756 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-PR3P0C2J1 1755 aaKnown RBP5.63□□□□□ -1.51
NCR1YPL006W TY1B-JR1P47098 1755 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-ML2Q03434 1755 aaKnown RBP5.63□□□□□ -1.51
NCR1YPL006W TY1B-ER1Q03612 1755 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-ML1Q04711 1755 aaKnown RBP5.63□□□□□ -1.51
NCR1YPL006W TY1B-GR2Q12269 1755 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-OLQ12273 1755 aa5.63□□□□□ -1.51
NCR1YPL006W TY1B-PLQ12414 1755 aaKnown RBP5.63□□□□□ -1.51
NCR1YPL006W TY1B-BRQ12193 1756 aa5.62□□□□□ -1.51
NCR1YPL006W TY1B-GR3Q12316 1755 aa5.62□□□□□ -1.51
NCR1YPL006W TY1B-ORQ92393 1755 aa5.62□□□□□ -1.51
NCR1YPL006W NSR1P27476 414 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
NCR1YPL006W TY3B-GQ99315 1547 aa5.61□□□□□ -1.51
NCR1YPL006W TSC11P40061 1430 aa5.6□□□□□ -1.51
NCR1YPL006W SNT2P53127 1403 aa5.58□□□□□ -1.52
NCR1YPL006W IFH1P39520 1085 aa5.57□□□□□ -1.52
NCR1YPL006W VTH1P40438 1549 aa5.57□□□□□ -1.52
NCR1YPL006W VTH2P40890 1549 aa5.57□□□□□ -1.52
NCR1YPL006W PAN1P32521 1480 aa5.56□□□□□ -1.52
NCR1YPL006W TY1B-JR2P47100 1755 aaKnown RBP5.55□□□□□ -1.52
NCR1YPL006W TY1B-ER2Q03619 1755 aa5.55□□□□□ -1.52
NCR1YPL006W TY1B-MR1Q04214 1755 aa5.55□□□□□ -1.52
NCR1YPL006W TY1B-MR2Q04670 1755 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms