Protein–RNA interactions for Protein: P40438
VTH1, VPS10 homolog 1, yeast
Protein |
RNA |
Prediction (catRAPID) |
Interaction (RIP-Chip) |
Gene |
UniProt Accession |
Gene |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
Detected Interaction |
VTH1 | P40438 | YML009W-B | YML009W-B | 477 nt | | 32,44 | ■■■□□ 2,78 | |
VTH1 | P40438 | NOP1 | YDL014W | 984 nt | | 31,34 | ■■■□□ 2,61 | |
VTH1 | P40438 | NSR1 | YGR159C | 1245 nt | | 31,11 | ■■■□□ 2,57 | |
VTH1 | P40438 | YKL036C | YKL036C | 393 nt | | 29,83 | ■■■□□ 2,37 | |
VTH1 | P40438 | YJL027C | YJL027C | 417 nt | | 28,01 | ■■■□□ 2,07 | |
VTH1 | P40438 | Q0297 | Q0297 | 156 nt | | 27,79 | ■■■□□ 2,04 | |
VTH1 | P40438 | SCS3 | YGL126W | 1143 nt | | 27,72 | ■■■□□ 2,03 | |
VTH1 | P40438 | SRX1 | YKL086W | 384 nt | | 27,6 | ■■■□□ 2,01 | |
VTH1 | P40438 | MDJ1 | YFL016C | 1536 nt | | 27,48 | ■■□□□ 1,99 | |
VTH1 | P40438 | YCR051W | YCR051W | 669 nt | | 26,35 | ■■□□□ 1,81 | |
VTH1 | P40438 | YOL085C | YOL085C | 342 nt | | 25,74 | ■■□□□ 1,71 | |
VTH1 | P40438 | PKP1 | YIL042C | 1185 nt | | 25,56 | ■■□□□ 1,68 | |
VTH1 | P40438 | SCJ1 | YMR214W | 1134 nt | | 25,05 | ■■□□□ 1,6 | |
VTH1 | P40438 | RPP1B | YDL130W | 321 nt | | 24,96 | ■■□□□ 1,59 | |
VTH1 | P40438 | ATS1 | YAL020C | 1002 nt | | 24,76 | ■■□□□ 1,55 | |
VTH1 | P40438 | TRN1 | tP(UGG)A | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | SUF9 | tP(UGG)F | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | SUF8 | tP(UGG)H | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | tP(UGG)L | tP(UGG)L | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | SUF7 | tP(UGG)M | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | tP(UGG)N1 | tP(UGG)N1 | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | tP(UGG)N2 | tP(UGG)N2 | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | tP(UGG)O1 | tP(UGG)O1 | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | SUF11 | tP(UGG)O2 | 72 nt | | 24,66 | ■■□□□ 1,54 | |
VTH1 | P40438 | DBP2 | YNL112W | 1641 nt | | 24,44 | ■■□□□ 1,5 | |
VTH1 | P40438 | CCC1 | YLR220W | 969 nt | | 24,4 | ■■□□□ 1,5 | |
VTH1 | P40438 | PET122 | YER153C | 765 nt | | 24 | ■■□□□ 1,43 | |
VTH1 | P40438 | SCR1 | SCR1 | 522 nt | | 23,71 | ■■□□□ 1,39 | |
VTH1 | P40438 | tP(UGG)O3 | tP(UGG)O3 | 72 nt | | 23,47 | ■■□□□ 1,35 | |
VTH1 | P40438 | RRN5 | YLR141W | 1092 nt | | 23,18 | ■■□□□ 1,3 | |
VTH1 | P40438 | RTC3 | YHR087W | 336 nt | | 23,1 | ■■□□□ 1,29 | |
VTH1 | P40438 | RSB1 | YOR049C | 1065 nt | | 23,09 | ■■□□□ 1,29 | |
VTH1 | P40438 | RVS167 | YDR388W | 1449 nt | | 23 | ■■□□□ 1,27 | |
VTH1 | P40438 | YBR190W | YBR190W | 312 nt | | 22,83 | ■■□□□ 1,25 | |
VTH1 | P40438 | YER088W-B | YER088W-B | 147 nt | | 22,77 | ■■□□□ 1,24 | |
VTH1 | P40438 | PST2 | YDR032C | 597 nt | | 22,74 | ■■□□□ 1,23 | |
VTH1 | P40438 | YDJ1 | YNL064C | 1230 nt | | 22,53 | ■■□□□ 1,2 | |
VTH1 | P40438 | SHR5 | YOL110W | 714 nt | | 22,42 | ■■□□□ 1,18 | |
VTH1 | P40438 | YKL097C | YKL097C | 411 nt | | 22,41 | ■■□□□ 1,18 | |
VTH1 | P40438 | GAR1 | YHR089C | 618 nt | | 22,13 | ■■□□□ 1,13 | |
VTH1 | P40438 | SHU1 | YHL006C | 453 nt | | 21,87 | ■■□□□ 1,09 | |
VTH1 | P40438 | DEP1 | YAL013W | 1218 nt | | 21,77 | ■■□□□ 1,08 | |
VTH1 | P40438 | URN1 | YPR152C | 1398 nt | | 21,46 | ■■□□□ 1,03 | |
VTH1 | P40438 | YOR139C | YOR139C | 393 nt | | 21,45 | ■■□□□ 1,02 | |
VTH1 | P40438 | YAL037C-B | YAL037C-B | 975 nt | | 21,41 | ■■□□□ 1,02 | |
VTH1 | P40438 | TIR1 | YER011W | 765 nt | | 21,29 | ■■□□□ 1 | |
VTH1 | P40438 | YNL208W | YNL208W | 600 nt | | 21,2 | ■□□□□ 0,98 | |
VTH1 | P40438 | RPN10 | YHR200W | 807 nt | | 21,11 | ■□□□□ 0,97 | |
VTH1 | P40438 | NPL3 | YDR432W | 1245 nt | | 21,05 | ■□□□□ 0,96 | |
VTH1 | P40438 | SRB2 | YHR041C | 633 nt | | 20,99 | ■□□□□ 0,95 | |
VTH1 | P40438 | SSA1 | YAL005C | 1929 nt | | 20,96 | ■□□□□ 0,95 | |
VTH1 | P40438 | MNP1 | YGL068W | 585 nt | | 20,94 | ■□□□□ 0,94 | |
VTH1 | P40438 | OPI9 | YLR338W | 858 nt | | 20,83 | ■□□□□ 0,92 | |
VTH1 | P40438 | SAH1 | YER043C | 1350 nt | | 20,67 | ■□□□□ 0,9 | |
VTH1 | P40438 | WWM1 | YFL010C | 636 nt | | 20,62 | ■□□□□ 0,89 | |
VTH1 | P40438 | HOM6 | YJR139C | 1080 nt | | 20,62 | ■□□□□ 0,89 | |
VTH1 | P40438 | YOL037C | YOL037C | 354 nt | | 20,57 | ■□□□□ 0,88 | |
VTH1 | P40438 | YGR021W | YGR021W | 873 nt | | 20,54 | ■□□□□ 0,88 | |
VTH1 | P40438 | YJR120W | YJR120W | 351 nt | | 20,5 | ■□□□□ 0,87 | |
VTH1 | P40438 | YJR018W | YJR018W | 363 nt | | 20,39 | ■□□□□ 0,85 | |
VTH1 | P40438 | tM(CAU)C | tM(CAU)C | 72 nt | | 20,34 | ■□□□□ 0,85 | |
VTH1 | P40438 | IMT4 | tM(CAU)E | 72 nt | | 20,34 | ■□□□□ 0,85 | |
VTH1 | P40438 | IMT3 | tM(CAU)J3 | 72 nt | | 20,34 | ■□□□□ 0,85 | |
VTH1 | P40438 | IMT1 | tM(CAU)O1 | 72 nt | | 20,34 | ■□□□□ 0,85 | |
VTH1 | P40438 | IMT2 | tM(CAU)P | 72 nt | | 20,34 | ■□□□□ 0,85 | |
VTH1 | P40438 | RKM5 | YLR137W | 1104 nt | | 20,31 | ■□□□□ 0,84 | |
VTH1 | P40438 | PUT4 | YOR348C | 1884 nt | | 20,3 | ■□□□□ 0,84 | |
VTH1 | P40438 | ARE1 | YCR048W | 1833 nt | | 20,24 | ■□□□□ 0,83 | |
VTH1 | P40438 | PUN1 | YLR414C | 792 nt | | 20,21 | ■□□□□ 0,83 | |
VTH1 | P40438 | YHR049C-A | YHR049C-A | 297 nt | | 20,17 | ■□□□□ 0,82 | |
VTH1 | P40438 | RPP2B | YDR382W | 333 nt | | 20,12 | ■□□□□ 0,81 | |
VTH1 | P40438 | YFL021C-A | YFL021C-A | 855 nt | | 20,11 | ■□□□□ 0,81 | |
VTH1 | P40438 | SSA3 | YBL075C | 1950 nt | | 20,06 | ■□□□□ 0,8 | |
VTH1 | P40438 | PUS2 | YGL063W | 1113 nt | | 20,05 | ■□□□□ 0,8 | |
VTH1 | P40438 | MOT3 | YMR070W | 1473 nt | | 20,03 | ■□□□□ 0,8 | |
VTH1 | P40438 | YLR281C | YLR281C | 468 nt | | 19,92 | ■□□□□ 0,78 | |
VTH1 | P40438 | BDH2 | YAL061W | 1254 nt | | 19,91 | ■□□□□ 0,78 | |
VTH1 | P40438 | PTC2 | YER089C | 1395 nt | | 19,89 | ■□□□□ 0,78 | |
VTH1 | P40438 | WHI5 | YOR083W | 888 nt | | 19,81 | ■□□□□ 0,76 | |
VTH1 | P40438 | POA1 | YBR022W | 534 nt | | 19,76 | ■□□□□ 0,75 | |
VTH1 | P40438 | BSC6 | YOL137W | 1494 nt | | 19,72 | ■□□□□ 0,75 | |
VTH1 | P40438 | YLR236C | YLR236C | 324 nt | | 19,71 | ■□□□□ 0,75 | |
VTH1 | P40438 | FMP45 | YDL222C | 930 nt | | 19,69 | ■□□□□ 0,74 | |
VTH1 | P40438 | BUD23 | YCR047C | 828 nt | | 19,68 | ■□□□□ 0,74 | |
VTH1 | P40438 | YBL100C | YBL100C | 315 nt | | 19,61 | ■□□□□ 0,73 | |
VTH1 | P40438 | FIS1 | YIL065C | 468 nt | | 19,61 | ■□□□□ 0,73 | |
VTH1 | P40438 | YPR011C | YPR011C | 981 nt | | 19,57 | ■□□□□ 0,72 | |
VTH1 | P40438 | LSM3 | YLR438C-A | 270 nt | | 19,53 | ■□□□□ 0,72 | |
VTH1 | P40438 | DSK2 | YMR276W | 1122 nt | | 19,53 | ■□□□□ 0,72 | |
VTH1 | P40438 | FPR4 | YLR449W | 1179 nt | | 19,51 | ■□□□□ 0,71 | |
VTH1 | P40438 | NAB2 | YGL122C | 1578 nt | | 19,46 | ■□□□□ 0,71 | |
VTH1 | P40438 | PHO4 | YFR034C | 939 nt | | 19,41 | ■□□□□ 0,7 | |
VTH1 | P40438 | DAL1 | YIR027C | 1383 nt | | 19,39 | ■□□□□ 0,69 | |
VTH1 | P40438 | INM2 | YDR287W | 879 nt | | 19,33 | ■□□□□ 0,68 | |
VTH1 | P40438 | YCH1 | YGR203W | 447 nt | | 19,33 | ■□□□□ 0,68 | |
VTH1 | P40438 | YLR154C-G | YLR154C-G | 150 nt | | 19,33 | ■□□□□ 0,68 | |
VTH1 | P40438 | FUN26 | YAL022C | 1554 nt | | 19,29 | ■□□□□ 0,68 | |
VTH1 | P40438 | LPX1 | YOR084W | 1164 nt | | 19,27 | ■□□□□ 0,68 | |
VTH1 | P40438 | TRM9 | YML014W | 840 nt | | 19,25 | ■□□□□ 0,67 | |
VTH1 | P40438 | MRPL8 | YJL063C | 717 nt | | 19,24 | ■□□□□ 0,67 | |
Retrieved 100 of 7,029 protein–RNA pairs in 9,9 ms