RNA–Protein interactions for RNA: YNR026C

SEC12, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene SEC12, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC12YNR026C MTC1P47018 478 aaKnown RBP16.51■□□□□ 0.23
SEC12YNR026C FAP1P53971 965 aa16.02■□□□□ 0.15
SEC12YNR026C PRY3P47033 881 aa15.09■□□□□ 0.01
SEC12YNR026C AAD16Q02895 342 aa14.53□□□□□ -0.08
SEC12YNR026C PRI1P10363 409 aa14.5□□□□□ -0.09
SEC12YNR026C DRS1P32892 752 aaKnown RBP14.41□□□□□ -0.1
SEC12YNR026C YCK3P39962 524 aa14.26□□□□□ -0.13
SEC12YNR026C HAA1Q12753 694 aaKnown RBP14.07□□□□□ -0.16
SEC12YNR026C ISW2Q08773 1120 aa13.88□□□□□ -0.19
SEC12YNR026C RPG1P38249 964 aaKnown RBP13.81□□□□□ -0.2
SEC12YNR026C TSR3Q12094 313 aaKnown RBP13.67□□□□□ -0.22
SEC12YNR026C MRPL32P25348 183 aa13.11□□□□□ -0.31
SEC12YNR026C DIP2Q12220 943 aaPredicted RBP13.01□□□□□ -0.33
SEC12YNR026C YGL015CP33199 130 aa12.86□□□□□ -0.35
SEC12YNR026C RSE1Q04693 1361 aaKnown RBP12.83□□□□□ -0.35
SEC12YNR026C REB1P21538 810 aa12.54□□□□□ -0.4
SEC12YNR026C RPL17AP05740 184 aaKnown RBP12.51□□□□□ -0.41
SEC12YNR026C RPL17BP46990 184 aaKnown RBP12.51□□□□□ -0.41
SEC12YNR026C CDC27P38042 758 aa12.3□□□□□ -0.44
SEC12YNR026C AVT3P36062 692 aa12.26□□□□□ -0.45
SEC12YNR026C BUD31P25337 157 aaPredicted RBP12.22□□□□□ -0.45
SEC12YNR026C YKR023WP36119 530 aaKnown RBP12.03□□□□□ -0.48
SEC12YNR026C MAP2P38174 421 aaKnown RBP12.03□□□□□ -0.48
SEC12YNR026C UBP10P53874 792 aaPredicted RBP12.03□□□□□ -0.48
SEC12YNR026C SPT21P35209 758 aa11.9□□□□□ -0.5
SEC12YNR026C HOP09932 586 aa11.78□□□□□ -0.52
SEC12YNR026C DCD1P06773 312 aa11.77□□□□□ -0.52
SEC12YNR026C TFC8Q12308 588 aa11.77□□□□□ -0.53
SEC12YNR026C SCY1P53009 804 aa11.6□□□□□ -0.55
SEC12YNR026C SIS1P25294 352 aaKnown RBP11.54□□□□□ -0.56
SEC12YNR026C TIF4632P39936 914 aaKnown RBP11.54□□□□□ -0.56
SEC12YNR026C TGL3P40308 642 aa11.53□□□□□ -0.56
SEC12YNR026C SLX5P32828 619 aaKnown RBP11.49□□□□□ -0.57
SEC12YNR026C BFR2Q06631 534 aaKnown RBP11.48□□□□□ -0.57
SEC12YNR026C UBP9P39967 754 aa11.46□□□□□ -0.57
SEC12YNR026C BCH2P36122 765 aa11.35□□□□□ -0.59
SEC12YNR026C RIM101P33400 625 aa11.27□□□□□ -0.6
SEC12YNR026C BDF1P35817 686 aa10.98□□□□□ -0.65
SEC12YNR026C EPS1P40557 701 aa10.98□□□□□ -0.65
SEC12YNR026C MST1P07236 462 aa10.94□□□□□ -0.66
SEC12YNR026C YBL029C-AQ3E756 94 aa10.92□□□□□ -0.66
SEC12YNR026C OXP1P28273 1286 aa10.88□□□□□ -0.67
SEC12YNR026C YOR238WQ08634 303 aa10.84□□□□□ -0.67
SEC12YNR026C VNX1P42839 908 aa10.76□□□□□ -0.69
SEC12YNR026C PTP3P40048 928 aa10.71□□□□□ -0.69
SEC12YNR026C YIL055CP40523 627 aaKnown RBP10.69□□□□□ -0.7
SEC12YNR026C NSR1P27476 414 aaKnown RBP RIP-Chip data10.68□□□□□ -0.7not detected
SEC12YNR026C SPP1Q03012 353 aa10.66□□□□□ -0.7
SEC12YNR026C YAP5P40574 245 aa10.61□□□□□ -0.71
SEC12YNR026C WSC3Q12215 556 aa10.6□□□□□ -0.71
SEC12YNR026C BBC1P47068 1157 aa10.58□□□□□ -0.72
SEC12YNR026C RSM7P47150 247 aa10.55□□□□□ -0.72
SEC12YNR026C AIR2Q12476 344 aaKnown RBP10.54□□□□□ -0.72
SEC12YNR026C AI2P03876 854 aa10.53□□□□□ -0.72
SEC12YNR026C TIF11P38912 153 aaKnown RBP10.48□□□□□ -0.73
SEC12YNR026C YJL171CP46992 396 aa10.47□□□□□ -0.73
SEC12YNR026C FKH1P40466 484 aa10.46□□□□□ -0.74
SEC12YNR026C YAH1Q12184 172 aaKnown RBP10.41□□□□□ -0.74
SEC12YNR026C GTT3P39996 337 aa10.4□□□□□ -0.75
SEC12YNR026C LDB19Q12502 818 aa10.33□□□□□ -0.76
SEC12YNR026C ULI1P43604 169 aa10.3□□□□□ -0.76
SEC12YNR026C IOC2Q12072 812 aa10.3□□□□□ -0.76
SEC12YNR026C PIB1Q06651 286 aa10.28□□□□□ -0.76
SEC12YNR026C BMT6Q12291 365 aa10.24□□□□□ -0.77
SEC12YNR026C YLR271WQ06152 274 aa10.2□□□□□ -0.78
SEC12YNR026C PSD2P53037 1138 aaKnown RBP10.15□□□□□ -0.79
SEC12YNR026C MRM1P25270 412 aa10.1□□□□□ -0.79
SEC12YNR026C MSB4Q12317 492 aa10.1□□□□□ -0.79
SEC12YNR026C EAP1P36041 632 aaKnown RBP10.07□□□□□ -0.8
SEC12YNR026C RTG1P32607 177 aa10.07□□□□□ -0.8
SEC12YNR026C SET4P42948 560 aa10.05□□□□□ -0.8
SEC12YNR026C TRP5P00931 707 aaKnown RBP10.03□□□□□ -0.8
SEC12YNR026C YOL036WQ08206 761 aa10.03□□□□□ -0.8
SEC12YNR026C NCR1Q12200 1170 aa10.03□□□□□ -0.8
SEC12YNR026C TFA1P36100 482 aa10□□□□□ -0.81
SEC12YNR026C YNL035CP53962 389 aaKnown RBP9.94□□□□□ -0.82
SEC12YNR026C DBP1P24784 617 aaKnown RBP9.93□□□□□ -0.82
SEC12YNR026C SEC61P32915 480 aa9.92□□□□□ -0.82
SEC12YNR026C VPS29P38759 282 aa9.91□□□□□ -0.82
SEC12YNR026C YMR1P47147 688 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
SEC12YNR026C YFR006WP43590 535 aa9.9□□□□□ -0.83
SEC12YNR026C VMA1P17255 1071 aaKnown RBP9.87□□□□□ -0.83
SEC12YNR026C STS1P38637 319 aa9.82□□□□□ -0.84
SEC12YNR026C SAM3Q08986 587 aa9.82□□□□□ -0.84
SEC12YNR026C RTG3P38165 486 aa9.8□□□□□ -0.84
SEC12YNR026C SSP1P38871 571 aa9.79□□□□□ -0.84
SEC12YNR026C TFG1P41895 735 aaPredicted RBP9.79□□□□□ -0.84
SEC12YNR026C CST9Q06032 482 aa9.79□□□□□ -0.84
SEC12YNR026C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.79□□□□□ -0.84not detected
SEC12YNR026C SAP30P38429 201 aa9.77□□□□□ -0.85
SEC12YNR026C DAN4P47179 1161 aa9.77□□□□□ -0.85
SEC12YNR026C BCK2P33306 851 aa9.73□□□□□ -0.85
SEC12YNR026C JIP4Q03361 876 aa9.71□□□□□ -0.86
SEC12YNR026C YDL129WQ07555 291 aa9.69□□□□□ -0.86
SEC12YNR026C CHL1P22516 861 aaPredicted RBP9.68□□□□□ -0.86
SEC12YNR026C RCR1P38212 213 aa9.67□□□□□ -0.86
SEC12YNR026C MGA2P40578 1113 aa9.65□□□□□ -0.86
SEC12YNR026C GYP5Q12344 894 aa9.65□□□□□ -0.86
SEC12YNR026C PRE3P38624 215 aa9.63□□□□□ -0.87
SEC12YNR026C ABP1P15891 592 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms