RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeastyeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRF5YNL299W DRS1P32892 752 aaKnown RBP9.86□□□□□ -0.83
TRF5YNL299W MTC1P47018 478 aaKnown RBP9.73□□□□□ -0.85
TRF5YNL299W BFR2Q06631 534 aaKnown RBP8.74□□□□□ -1.01
TRF5YNL299W TFA1P36100 482 aa8.63□□□□□ -1.03
TRF5YNL299W DIP2Q12220 943 aaPredicted RBP8.33□□□□□ -1.08
TRF5YNL299W AVT3P36062 692 aa8.31□□□□□ -1.08
TRF5YNL299W ISW2Q08773 1120 aa7.9□□□□□ -1.14
TRF5YNL299W FAP1P53971 965 aa7.9□□□□□ -1.15
TRF5YNL299W RSE1Q04693 1361 aaKnown RBP7.85□□□□□ -1.15
TRF5YNL299W PRI1P10363 409 aa7.78□□□□□ -1.16
TRF5YNL299W RPG1P38249 964 aaKnown RBP7.77□□□□□ -1.17
TRF5YNL299W RQC2Q12532 1038 aaKnown RBP7.73□□□□□ -1.17
TRF5YNL299W AAD16Q02895 342 aa7.62□□□□□ -1.19
TRF5YNL299W RPL17AP05740 184 aaKnown RBP7.54□□□□□ -1.2
TRF5YNL299W RPL17BP46990 184 aaKnown RBP7.54□□□□□ -1.2
TRF5YNL299W REB1P21538 810 aa7.45□□□□□ -1.22
TRF5YNL299W PRY3P47033 881 aa7.38□□□□□ -1.23
TRF5YNL299W TSR3Q12094 313 aaKnown RBP7.36□□□□□ -1.23
TRF5YNL299W SGS1P35187 1447 aa7.31□□□□□ -1.24
TRF5YNL299W SPT21P35209 758 aa7.3□□□□□ -1.24
TRF5YNL299W DMA1P38823 416 aa7.29□□□□□ -1.24
TRF5YNL299W MON2P48563 1636 aaPredicted RBP7.27□□□□□ -1.25
TRF5YNL299W INO80P53115 1489 aa7.24□□□□□ -1.25
TRF5YNL299W TCB3Q03640 1545 aaKnown RBP7.21□□□□□ -1.26
TRF5YNL299W RIM101P33400 625 aa7.2□□□□□ -1.26
TRF5YNL299W PTP3P40048 928 aa7.17□□□□□ -1.26
TRF5YNL299W TY1B-DR4Q07793 1604 aa7.16□□□□□ -1.26
TRF5YNL299W MRPL32P25348 183 aa7.09□□□□□ -1.27
TRF5YNL299W TAF7Q05021 590 aa7.06□□□□□ -1.28
TRF5YNL299W SWR1Q05471 1514 aa7.05□□□□□ -1.28
TRF5YNL299W YKR023WP36119 530 aaKnown RBP7.03□□□□□ -1.28
TRF5YNL299W SSP1P38871 571 aa7.01□□□□□ -1.29
TRF5YNL299W YCK3P39962 524 aa6.99□□□□□ -1.29
TRF5YNL299W HAA1Q12753 694 aaKnown RBP6.99□□□□□ -1.29
TRF5YNL299W HSL1P34244 1518 aa6.98□□□□□ -1.29
TRF5YNL299W OXP1P28273 1286 aa6.96□□□□□ -1.3
TRF5YNL299W SPT6P23615 1451 aaKnown RBP6.94□□□□□ -1.3
TRF5YNL299W SPA2P23201 1466 aaKnown RBP6.92□□□□□ -1.3
TRF5YNL299W SSN2P38931 1420 aa6.92□□□□□ -1.3
TRF5YNL299W LEO1P38439 464 aa6.89□□□□□ -1.31
TRF5YNL299W TFC8Q12308 588 aa6.89□□□□□ -1.31
TRF5YNL299W DNA2P38859 1522 aa6.89□□□□□ -1.31
TRF5YNL299W HOP09932 586 aa6.87□□□□□ -1.31
TRF5YNL299W YIL055CP40523 627 aaKnown RBP6.87□□□□□ -1.31
TRF5YNL299W CDC27P38042 758 aa6.86□□□□□ -1.31
TRF5YNL299W YAH1Q12184 172 aaKnown RBP6.86□□□□□ -1.31
TRF5YNL299W KOG1P38873 1557 aa6.85□□□□□ -1.31
TRF5YNL299W HIR3P47171 1648 aa6.84□□□□□ -1.31
TRF5YNL299W YLR271WQ06152 274 aa6.83□□□□□ -1.32
TRF5YNL299W DCD1P06773 312 aa6.82□□□□□ -1.32
TRF5YNL299W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
TRF5YNL299W SAS10Q12136 610 aaPredicted RBP6.77□□□□□ -1.33
TRF5YNL299W RSM7P47150 247 aa6.76□□□□□ -1.33
TRF5YNL299W XRN1P22147 1528 aaKnown RBP6.74□□□□□ -1.33
TRF5YNL299W LEU3P08638 886 aa6.71□□□□□ -1.34
TRF5YNL299W MGA2P40578 1113 aa6.71□□□□□ -1.34
TRF5YNL299W BCH2P36122 765 aa6.69□□□□□ -1.34
TRF5YNL299W THO2P53552 1597 aaKnown RBP6.67□□□□□ -1.34
TRF5YNL299W REV3P14284 1504 aa6.66□□□□□ -1.34
TRF5YNL299W CST9Q06032 482 aa6.65□□□□□ -1.34
TRF5YNL299W AI2P03876 854 aa6.64□□□□□ -1.35
TRF5YNL299W BUD4P47136 1447 aa6.64□□□□□ -1.35
TRF5YNL299W ECM5Q03214 1411 aa6.63□□□□□ -1.35
TRF5YNL299W SIN3P22579 1536 aa6.63□□□□□ -1.35
TRF5YNL299W PSD2P53037 1138 aaKnown RBP6.62□□□□□ -1.35
TRF5YNL299W UBP10P53874 792 aaPredicted RBP6.62□□□□□ -1.35
TRF5YNL299W BBC1P47068 1157 aa6.61□□□□□ -1.35
TRF5YNL299W YGL015CP33199 130 aa6.6□□□□□ -1.35
TRF5YNL299W EPS1P40557 701 aa6.58□□□□□ -1.36
TRF5YNL299W SSK2P53599 1579 aa6.57□□□□□ -1.36
TRF5YNL299W ATG2P53855 1592 aa6.57□□□□□ -1.36
TRF5YNL299W MAP2P38174 421 aaKnown RBP6.57□□□□□ -1.36
TRF5YNL299W SCY1P53009 804 aa6.57□□□□□ -1.36
TRF5YNL299W PEP1P32319 1579 aa6.55□□□□□ -1.36
TRF5YNL299W MDS3P53094 1487 aa6.55□□□□□ -1.36
TRF5YNL299W BDF1P35817 686 aa6.54□□□□□ -1.36
TRF5YNL299W ESP1Q03018 1630 aa6.52□□□□□ -1.37
TRF5YNL299W TAF2P23255 1407 aa6.52□□□□□ -1.37
TRF5YNL299W RAM2P29703 316 aa6.48□□□□□ -1.37
TRF5YNL299W RPN1P38764 993 aaKnown RBP6.47□□□□□ -1.37
TRF5YNL299W MYO2P19524 1574 aaKnown RBP6.47□□□□□ -1.37
TRF5YNL299W SLX5P32828 619 aaKnown RBP6.46□□□□□ -1.38
TRF5YNL299W SKI3P17883 1432 aaKnown RBP6.45□□□□□ -1.38
TRF5YNL299W MRM1P25270 412 aa6.44□□□□□ -1.38
TRF5YNL299W DMA2P53924 522 aa6.43□□□□□ -1.38
TRF5YNL299W YPK9Q12697 1472 aa6.43□□□□□ -1.38
TRF5YNL299W SET1P38827 1080 aaKnown RBP6.42□□□□□ -1.38
TRF5YNL299W YPR148CQ06523 435 aa6.41□□□□□ -1.38
TRF5YNL299W RCR1P38212 213 aa6.39□□□□□ -1.39
TRF5YNL299W SCC2Q04002 1493 aa6.38□□□□□ -1.39
TRF5YNL299W CKB1P43639 278 aa6.37□□□□□ -1.39
TRF5YNL299W VPS70P47161 811 aa6.37□□□□□ -1.39
TRF5YNL299W SPB4P25808 606 aaPredicted RBP6.37□□□□□ -1.39
TRF5YNL299W RTG3P38165 486 aa6.37□□□□□ -1.39
TRF5YNL299W RPO31P04051 1460 aa6.36□□□□□ -1.39
TRF5YNL299W ABP1P15891 592 aaKnown RBP6.35□□□□□ -1.39
TRF5YNL299W BPT1P14772 1559 aa6.34□□□□□ -1.39
TRF5YNL299W POL1P13382 1468 aa6.34□□□□□ -1.39
TRF5YNL299W UFD4P33202 1483 aa6.34□□□□□ -1.39
TRF5YNL299W TIF4632P39936 914 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms