RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeastyeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM21YNL294C MTC1P47018 478 aaKnown RBP11.86□□□□□ -0.51
RIM21YNL294C FAP1P53971 965 aa11.79□□□□□ -0.52
RIM21YNL294C PRY3P47033 881 aa11.1□□□□□ -0.63
RIM21YNL294C AAD16Q02895 342 aa10.62□□□□□ -0.71
RIM21YNL294C PRI1P10363 409 aa10.54□□□□□ -0.72
RIM21YNL294C HAA1Q12753 694 aaKnown RBP10.41□□□□□ -0.74
RIM21YNL294C YCK3P39962 524 aa10.33□□□□□ -0.76
RIM21YNL294C DRS1P32892 752 aaKnown RBP10.13□□□□□ -0.79
RIM21YNL294C ISW2Q08773 1120 aa10.1□□□□□ -0.79
RIM21YNL294C RPG1P38249 964 aaKnown RBP9.97□□□□□ -0.81
RIM21YNL294C TSR3Q12094 313 aaKnown RBP9.9□□□□□ -0.82
RIM21YNL294C MRPL32P25348 183 aa9.59□□□□□ -0.87
RIM21YNL294C YGL015CP33199 130 aa9.47□□□□□ -0.89
RIM21YNL294C DIP2Q12220 943 aaPredicted RBP9.23□□□□□ -0.93
RIM21YNL294C RSE1Q04693 1361 aaKnown RBP9.22□□□□□ -0.93
RIM21YNL294C BUD31P25337 157 aaPredicted RBP9.06□□□□□ -0.96
RIM21YNL294C REB1P21538 810 aa9.05□□□□□ -0.96
RIM21YNL294C RPL17AP05740 184 aaKnown RBP8.97□□□□□ -0.97
RIM21YNL294C RPL17BP46990 184 aaKnown RBP8.97□□□□□ -0.97
RIM21YNL294C CDC27P38042 758 aa8.83□□□□□ -1
RIM21YNL294C UBP10P53874 792 aaPredicted RBP8.79□□□□□ -1
RIM21YNL294C MAP2P38174 421 aaKnown RBP8.69□□□□□ -1.02
RIM21YNL294C AVT3P36062 692 aa8.59□□□□□ -1.03
RIM21YNL294C YKR023WP36119 530 aaKnown RBP8.59□□□□□ -1.03
RIM21YNL294C SIS1P25294 352 aaKnown RBP8.58□□□□□ -1.04
RIM21YNL294C UBP9P39967 754 aa8.51□□□□□ -1.05
RIM21YNL294C TIF4632P39936 914 aaKnown RBP8.48□□□□□ -1.05
RIM21YNL294C SPT21P35209 758 aa8.45□□□□□ -1.06
RIM21YNL294C TFC8Q12308 588 aa8.43□□□□□ -1.06
RIM21YNL294C HOP09932 586 aa8.43□□□□□ -1.06
RIM21YNL294C TGL3P40308 642 aa8.43□□□□□ -1.06
RIM21YNL294C DCD1P06773 312 aa8.38□□□□□ -1.07
RIM21YNL294C SCY1P53009 804 aa8.36□□□□□ -1.07
RIM21YNL294C SLX5P32828 619 aaKnown RBP8.36□□□□□ -1.07
RIM21YNL294C BCH2P36122 765 aa8.11□□□□□ -1.11
RIM21YNL294C BFR2Q06631 534 aaKnown RBP8.01□□□□□ -1.13
RIM21YNL294C RIM101P33400 625 aa7.99□□□□□ -1.13
RIM21YNL294C MST1P07236 462 aa7.93□□□□□ -1.14
RIM21YNL294C YBL029C-AQ3E756 94 aa7.93□□□□□ -1.14
RIM21YNL294C YOR238WQ08634 303 aa7.89□□□□□ -1.15
RIM21YNL294C EPS1P40557 701 aa7.85□□□□□ -1.15
RIM21YNL294C BDF1P35817 686 aa7.85□□□□□ -1.15
RIM21YNL294C VNX1P42839 908 aa7.83□□□□□ -1.16
RIM21YNL294C TFA1P36100 482 aa7.81□□□□□ -1.16
RIM21YNL294C SPP1Q03012 353 aa7.79□□□□□ -1.16
RIM21YNL294C NSR1P27476 414 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
RIM21YNL294C YJL171CP46992 396 aa7.76□□□□□ -1.17
RIM21YNL294C YAP5P40574 245 aa7.7□□□□□ -1.18
RIM21YNL294C WSC3Q12215 556 aa7.7□□□□□ -1.18
RIM21YNL294C AIR2Q12476 344 aaKnown RBP7.68□□□□□ -1.18
RIM21YNL294C OXP1P28273 1286 aa7.65□□□□□ -1.18
RIM21YNL294C PTP3P40048 928 aa7.65□□□□□ -1.18
RIM21YNL294C YIL055CP40523 627 aaKnown RBP7.65□□□□□ -1.18
RIM21YNL294C TIF11P38912 153 aaKnown RBP7.64□□□□□ -1.19
RIM21YNL294C FKH1P40466 484 aa7.63□□□□□ -1.19
RIM21YNL294C BBC1P47068 1157 aa7.62□□□□□ -1.19
RIM21YNL294C GTT3P39996 337 aa7.59□□□□□ -1.19
RIM21YNL294C BMT6Q12291 365 aa7.54□□□□□ -1.2
RIM21YNL294C LDB19Q12502 818 aa7.52□□□□□ -1.21
RIM21YNL294C RSM7P47150 247 aa7.5□□□□□ -1.21
RIM21YNL294C AI2P03876 854 aa7.49□□□□□ -1.21
RIM21YNL294C ULI1P43604 169 aa7.49□□□□□ -1.21
RIM21YNL294C IOC2Q12072 812 aa7.45□□□□□ -1.22
RIM21YNL294C EAP1P36041 632 aaKnown RBP7.37□□□□□ -1.23
RIM21YNL294C MSB4Q12317 492 aa7.36□□□□□ -1.23
RIM21YNL294C PIB1Q06651 286 aa7.33□□□□□ -1.24
RIM21YNL294C YAH1Q12184 172 aaKnown RBP7.33□□□□□ -1.24
RIM21YNL294C RTG1P32607 177 aa7.3□□□□□ -1.24
RIM21YNL294C NCR1Q12200 1170 aa7.3□□□□□ -1.24
RIM21YNL294C TRP5P00931 707 aaKnown RBP7.23□□□□□ -1.25
RIM21YNL294C SEC61P32915 480 aa7.23□□□□□ -1.25
RIM21YNL294C YNL035CP53962 389 aaKnown RBP7.23□□□□□ -1.25
RIM21YNL294C SET4P42948 560 aa7.22□□□□□ -1.25
RIM21YNL294C YOL036WQ08206 761 aa7.22□□□□□ -1.25
RIM21YNL294C TFG1P41895 735 aaPredicted RBP7.2□□□□□ -1.26
RIM21YNL294C MRM1P25270 412 aa7.16□□□□□ -1.26
RIM21YNL294C PSD2P53037 1138 aaKnown RBP7.16□□□□□ -1.26
RIM21YNL294C BCK2P33306 851 aa7.15□□□□□ -1.27
RIM21YNL294C YLR271WQ06152 274 aa7.15□□□□□ -1.27
RIM21YNL294C RQC2Q12532 1038 aaKnown RBP7.14□□□□□ -1.27
RIM21YNL294C YMR1P47147 688 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
RIM21YNL294C CHL1P22516 861 aaPredicted RBP7.09□□□□□ -1.28
RIM21YNL294C SAP30P38429 201 aa7.09□□□□□ -1.28
RIM21YNL294C DBP1P24784 617 aaKnown RBP7.07□□□□□ -1.28
RIM21YNL294C VMA1P17255 1071 aaKnown RBP7.05□□□□□ -1.28
RIM21YNL294C JIP4Q03361 876 aa7.05□□□□□ -1.28
RIM21YNL294C SAM3Q08986 587 aa7.05□□□□□ -1.28
RIM21YNL294C YDL129WQ07555 291 aa7.04□□□□□ -1.28
RIM21YNL294C PRE3P38624 215 aa7.01□□□□□ -1.29
RIM21YNL294C YFR006WP43590 535 aa7.01□□□□□ -1.29
RIM21YNL294C DAN4P47179 1161 aa7.01□□□□□ -1.29
RIM21YNL294C ABP1P15891 592 aaKnown RBP7.01□□□□□ -1.29
RIM21YNL294C VPS29P38759 282 aa7.01□□□□□ -1.29
RIM21YNL294C RTG3P38165 486 aa6.98□□□□□ -1.29
RIM21YNL294C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
RIM21YNL294C STS1P38637 319 aa6.94□□□□□ -1.3
RIM21YNL294C XDJ1P39102 459 aa6.94□□□□□ -1.3
RIM21YNL294C GYP5Q12344 894 aa6.94□□□□□ -1.3
RIM21YNL294C HTA1P04911 132 aaKnown RBP6.93□□□□□ -1.3
RIM21YNL294C HTA2P04912 132 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms