RNA–Protein interactions for RNA: YNL075W

IMP4, Transcript of Component of the SSU processome, yeastyeast

Gene IMP4, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP4YNL075W MTC1P47018 478 aaKnown RBP11.84□□□□□ -0.51
IMP4YNL075W FAP1P53971 965 aa11.52□□□□□ -0.57
IMP4YNL075W PRY3P47033 881 aa10.89□□□□□ -0.67
IMP4YNL075W DRS1P32892 752 aaKnown RBP10.59□□□□□ -0.71
IMP4YNL075W AAD16Q02895 342 aa10.35□□□□□ -0.75
IMP4YNL075W YCK3P39962 524 aa10.31□□□□□ -0.76
IMP4YNL075W PRI1P10363 409 aa10.28□□□□□ -0.76
IMP4YNL075W HAA1Q12753 694 aaKnown RBP10.17□□□□□ -0.78
IMP4YNL075W ISW2Q08773 1120 aa9.92□□□□□ -0.82
IMP4YNL075W RPG1P38249 964 aaKnown RBP9.81□□□□□ -0.84
IMP4YNL075W TSR3Q12094 313 aaKnown RBP9.63□□□□□ -0.87
IMP4YNL075W DIP2Q12220 943 aaPredicted RBP9.45□□□□□ -0.9
IMP4YNL075W MRPL32P25348 183 aa9.28□□□□□ -0.92
IMP4YNL075W RSE1Q04693 1361 aaKnown RBP9.27□□□□□ -0.93
IMP4YNL075W YGL015CP33199 130 aa9.19□□□□□ -0.94
IMP4YNL075W RPL17AP05740 184 aaKnown RBP9□□□□□ -0.97
IMP4YNL075W REB1P21538 810 aa9□□□□□ -0.97
IMP4YNL075W RPL17BP46990 184 aaKnown RBP9□□□□□ -0.97
IMP4YNL075W AVT3P36062 692 aa8.99□□□□□ -0.97
IMP4YNL075W BUD31P25337 157 aaPredicted RBP8.97□□□□□ -0.97
IMP4YNL075W CDC27P38042 758 aa8.71□□□□□ -1.02
IMP4YNL075W YKR023WP36119 530 aaKnown RBP8.59□□□□□ -1.03
IMP4YNL075W SPT21P35209 758 aa8.58□□□□□ -1.04
IMP4YNL075W BFR2Q06631 534 aaKnown RBP8.58□□□□□ -1.04
IMP4YNL075W UBP10P53874 792 aaPredicted RBP8.56□□□□□ -1.04
IMP4YNL075W MAP2P38174 421 aaKnown RBP8.5□□□□□ -1.05
IMP4YNL075W TFC8Q12308 588 aa8.42□□□□□ -1.06
IMP4YNL075W HOP09932 586 aa8.4□□□□□ -1.06
IMP4YNL075W SIS1P25294 352 aaKnown RBP8.38□□□□□ -1.07
IMP4YNL075W DCD1P06773 312 aa8.36□□□□□ -1.07
IMP4YNL075W SCY1P53009 804 aa8.25□□□□□ -1.09
IMP4YNL075W UBP9P39967 754 aa8.24□□□□□ -1.09
IMP4YNL075W TIF4632P39936 914 aaKnown RBP8.21□□□□□ -1.1
IMP4YNL075W RIM101P33400 625 aa8.2□□□□□ -1.1
IMP4YNL075W SLX5P32828 619 aaKnown RBP8.18□□□□□ -1.1
IMP4YNL075W TGL3P40308 642 aa8.18□□□□□ -1.1
IMP4YNL075W BCH2P36122 765 aa8.12□□□□□ -1.11
IMP4YNL075W OXP1P28273 1286 aa7.89□□□□□ -1.15
IMP4YNL075W EPS1P40557 701 aa7.89□□□□□ -1.15
IMP4YNL075W BDF1P35817 686 aa7.87□□□□□ -1.15
IMP4YNL075W MST1P07236 462 aa7.79□□□□□ -1.16
IMP4YNL075W YIL055CP40523 627 aaKnown RBP7.79□□□□□ -1.16
IMP4YNL075W PTP3P40048 928 aa7.77□□□□□ -1.17
IMP4YNL075W YOR238WQ08634 303 aa7.74□□□□□ -1.17
IMP4YNL075W YBL029C-AQ3E756 94 aa7.74□□□□□ -1.17
IMP4YNL075W NSR1P27476 414 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18 RIP-Chip
IMP4YNL075W BBC1P47068 1157 aa7.68□□□□□ -1.18
IMP4YNL075W RSM7P47150 247 aa7.68□□□□□ -1.18
IMP4YNL075W AI2P03876 854 aa7.64□□□□□ -1.19
IMP4YNL075W YAP5P40574 245 aa7.62□□□□□ -1.19
IMP4YNL075W VNX1P42839 908 aa7.62□□□□□ -1.19
IMP4YNL075W YAH1Q12184 172 aaKnown RBP7.58□□□□□ -1.2
IMP4YNL075W SPP1Q03012 353 aa7.55□□□□□ -1.2
IMP4YNL075W WSC3Q12215 556 aa7.52□□□□□ -1.21
IMP4YNL075W AIR2Q12476 344 aaKnown RBP7.52□□□□□ -1.21
IMP4YNL075W FKH1P40466 484 aa7.49□□□□□ -1.21
IMP4YNL075W TIF11P38912 153 aaKnown RBP7.46□□□□□ -1.22
IMP4YNL075W GTT3P39996 337 aa7.46□□□□□ -1.22
IMP4YNL075W YJL171CP46992 396 aa7.46□□□□□ -1.22
IMP4YNL075W YLR271WQ06152 274 aa7.45□□□□□ -1.22
IMP4YNL075W TFA1P36100 482 aa7.44□□□□□ -1.22
IMP4YNL075W PSD2P53037 1138 aaKnown RBP7.4□□□□□ -1.22
IMP4YNL075W ULI1P43604 169 aa7.34□□□□□ -1.23
IMP4YNL075W PIB1Q06651 286 aa7.34□□□□□ -1.23
IMP4YNL075W LDB19Q12502 818 aa7.34□□□□□ -1.23
IMP4YNL075W MRM1P25270 412 aa7.33□□□□□ -1.24
IMP4YNL075W IOC2Q12072 812 aa7.33□□□□□ -1.24
IMP4YNL075W BMT6Q12291 365 aa7.3□□□□□ -1.24
IMP4YNL075W MSB4Q12317 492 aa7.29□□□□□ -1.24
IMP4YNL075W EAP1P36041 632 aaKnown RBP7.26□□□□□ -1.25
IMP4YNL075W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
IMP4YNL075W SSP1P38871 571 aa7.25□□□□□ -1.25
IMP4YNL075W YMR1P47147 688 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
IMP4YNL075W YOL036WQ08206 761 aa7.21□□□□□ -1.26
IMP4YNL075W VPS29P38759 282 aa7.19□□□□□ -1.26
IMP4YNL075W TRP5P00931 707 aaKnown RBP7.18□□□□□ -1.26
IMP4YNL075W DBP1P24784 617 aaKnown RBP7.18□□□□□ -1.26
IMP4YNL075W RTG1P32607 177 aa7.18□□□□□ -1.26
IMP4YNL075W SET4P42948 560 aa7.18□□□□□ -1.26
IMP4YNL075W RTG3P38165 486 aa7.16□□□□□ -1.26
IMP4YNL075W CST9Q06032 482 aa7.15□□□□□ -1.26
IMP4YNL075W NCR1Q12200 1170 aa7.15□□□□□ -1.26
IMP4YNL075W VMA1P17255 1071 aaKnown RBP7.13□□□□□ -1.27
IMP4YNL075W MGA2P40578 1113 aa7.13□□□□□ -1.27
IMP4YNL075W YFR006WP43590 535 aa7.13□□□□□ -1.27
IMP4YNL075W YNL035CP53962 389 aaKnown RBP7.13□□□□□ -1.27
IMP4YNL075W SAM3Q08986 587 aa7.12□□□□□ -1.27
IMP4YNL075W MON2P48563 1636 aaPredicted RBP7.12□□□□□ -1.27
IMP4YNL075W SEC61P32915 480 aa7.11□□□□□ -1.27
IMP4YNL075W STS1P38637 319 aa7.11□□□□□ -1.27
IMP4YNL075W INO80P53115 1489 aa7.1□□□□□ -1.27
IMP4YNL075W TFG1P41895 735 aaPredicted RBP7.03□□□□□ -1.28
IMP4YNL075W RCR1P38212 213 aa7.02□□□□□ -1.29
IMP4YNL075W ABP1P15891 592 aaKnown RBP7.01□□□□□ -1.29
IMP4YNL075W JIP4Q03361 876 aa7.01□□□□□ -1.29
IMP4YNL075W DAN4P47179 1161 aa7□□□□□ -1.29
IMP4YNL075W GYP5Q12344 894 aa6.98□□□□□ -1.29
IMP4YNL075W HTA1P04911 132 aaKnown RBP6.96□□□□□ -1.3
IMP4YNL075W HTA2P04912 132 aa6.96□□□□□ -1.3
IMP4YNL075W SAP30P38429 201 aa6.96□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms