RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A MTC1P47018 478 aaKnown RBP13.2□□□□□ -0.3
KSH1YNL024C-A MON2P48563 1636 aaPredicted RBP12.53□□□□□ -0.4
KSH1YNL024C-A DRS1P32892 752 aaKnown RBP12.41□□□□□ -0.42
KSH1YNL024C-A INO80P53115 1489 aa12.37□□□□□ -0.43
KSH1YNL024C-A SWR1Q05471 1514 aa11.91□□□□□ -0.5
KSH1YNL024C-A TY1B-DR4Q07793 1604 aa11.9□□□□□ -0.5
KSH1YNL024C-A DNA2P38859 1522 aa11.84□□□□□ -0.51
KSH1YNL024C-A TCB3Q03640 1545 aaKnown RBP11.83□□□□□ -0.52
KSH1YNL024C-A KOG1P38873 1557 aa11.75□□□□□ -0.53
KSH1YNL024C-A FAP1P53971 965 aa11.66□□□□□ -0.54
KSH1YNL024C-A SGS1P35187 1447 aa11.6□□□□□ -0.55
KSH1YNL024C-A HSL1P34244 1518 aa11.43□□□□□ -0.58
KSH1YNL024C-A SPT6P23615 1451 aaKnown RBP11.38□□□□□ -0.59
KSH1YNL024C-A RSE1Q04693 1361 aaKnown RBP11.3□□□□□ -0.6
KSH1YNL024C-A SPA2P23201 1466 aaKnown RBP11.27□□□□□ -0.6
KSH1YNL024C-A HIR3P47171 1648 aa11.19□□□□□ -0.62
KSH1YNL024C-A THO2P53552 1597 aaKnown RBP11.12□□□□□ -0.63
KSH1YNL024C-A PRI1P10363 409 aa11.07□□□□□ -0.64
KSH1YNL024C-A SSN2P38931 1420 aa11.04□□□□□ -0.64
KSH1YNL024C-A ECM5Q03214 1411 aa11.04□□□□□ -0.64
KSH1YNL024C-A BUD4P47136 1447 aa11.02□□□□□ -0.64
KSH1YNL024C-A PRY3P47033 881 aa10.98□□□□□ -0.65
KSH1YNL024C-A AAD16Q02895 342 aa10.96□□□□□ -0.65
KSH1YNL024C-A MDS3P53094 1487 aa10.95□□□□□ -0.66
KSH1YNL024C-A XRN1P22147 1528 aaKnown RBP10.94□□□□□ -0.66
KSH1YNL024C-A ISW2Q08773 1120 aa10.88□□□□□ -0.67
KSH1YNL024C-A PEP1P32319 1579 aa10.86□□□□□ -0.67
KSH1YNL024C-A ATG2P53855 1592 aa10.85□□□□□ -0.67
KSH1YNL024C-A DIP2Q12220 943 aaPredicted RBP10.84□□□□□ -0.67
KSH1YNL024C-A REV3P14284 1504 aa10.78□□□□□ -0.68
KSH1YNL024C-A RPG1P38249 964 aaKnown RBP10.77□□□□□ -0.69
KSH1YNL024C-A BPT1P14772 1559 aa10.69□□□□□ -0.7
KSH1YNL024C-A SIN3P22579 1536 aa10.68□□□□□ -0.7
KSH1YNL024C-A SSK2P53599 1579 aa10.65□□□□□ -0.7
KSH1YNL024C-A ESP1Q03018 1630 aa10.62□□□□□ -0.71
KSH1YNL024C-A TAF2P23255 1407 aa10.55□□□□□ -0.72
KSH1YNL024C-A SKI3P17883 1432 aaKnown RBP10.54□□□□□ -0.72
KSH1YNL024C-A AVT3P36062 692 aa10.54□□□□□ -0.72
KSH1YNL024C-A YCF1P39109 1515 aaKnown RBP10.5□□□□□ -0.73
KSH1YNL024C-A YCK3P39962 524 aa10.48□□□□□ -0.73
KSH1YNL024C-A MYO2P19524 1574 aaKnown RBP10.46□□□□□ -0.74
KSH1YNL024C-A TSR3Q12094 313 aaKnown RBP10.44□□□□□ -0.74
KSH1YNL024C-A TY2B-LR1P0C2J3 1770 aa10.42□□□□□ -0.74
KSH1YNL024C-A TY2B-FP0CX63 1770 aa10.42□□□□□ -0.74
KSH1YNL024C-A TY2B-GR2P0CX64 1770 aa10.42□□□□□ -0.74
KSH1YNL024C-A TY2B-CP25384 1770 aa10.42□□□□□ -0.74
KSH1YNL024C-A TY2B-DR2Q03494 1770 aa10.42□□□□□ -0.74
KSH1YNL024C-A TY1B-DR1Q03855 1755 aa10.42□□□□□ -0.74
KSH1YNL024C-A TY2B-DR3Q07791 1770 aaKnown RBP10.42□□□□□ -0.74
KSH1YNL024C-A TY2B-OR1Q12113 1770 aa10.42□□□□□ -0.74
KSH1YNL024C-A TY2B-DR1Q12472 1770 aa10.42□□□□□ -0.74
KSH1YNL024C-A TY2B-OR2Q12501 1770 aa10.42□□□□□ -0.74
KSH1YNL024C-A ESC1Q03661 1658 aaKnown RBP10.42□□□□□ -0.74
KSH1YNL024C-A BFR2Q06631 534 aaKnown RBP10.37□□□□□ -0.75
KSH1YNL024C-A TY1B-BRQ12193 1756 aa10.37□□□□□ -0.75
KSH1YNL024C-A TY1B-GR3Q12316 1755 aa10.37□□□□□ -0.75
KSH1YNL024C-A TY1B-ORQ92393 1755 aa10.37□□□□□ -0.75
KSH1YNL024C-A UFD4P33202 1483 aa10.36□□□□□ -0.75
KSH1YNL024C-A SCC2Q04002 1493 aa10.35□□□□□ -0.75
KSH1YNL024C-A YPK9Q12697 1472 aa10.35□□□□□ -0.75
KSH1YNL024C-A HAA1Q12753 694 aaKnown RBP10.33□□□□□ -0.76
KSH1YNL024C-A CDC25P04821 1589 aa10.31□□□□□ -0.76
KSH1YNL024C-A TY2B-BQ12491 1770 aa10.3□□□□□ -0.76
KSH1YNL024C-A TY1B-HO13535 1793 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-DR5P0C2I2 1755 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-DR6P0C2I3 1755 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-LR2P0C2I5 1755 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-LR3P0C2I6 1755 aaKnown RBP10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-PR1P0C2I9 1755 aaKnown RBP10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-PR2P0C2J0 1756 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-PR3P0C2J1 1755 aaKnown RBP10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-JR1P47098 1755 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-ML2Q03434 1755 aaKnown RBP10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-ER1Q03612 1755 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-ML1Q04711 1755 aaKnown RBP10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-GR2Q12269 1755 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-OLQ12273 1755 aa10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-PLQ12414 1755 aaKnown RBP10.29□□□□□ -0.76
KSH1YNL024C-A TY1B-DR3Q99231 1755 aa10.27□□□□□ -0.77
KSH1YNL024C-A RPO31P04051 1460 aa10.25□□□□□ -0.77
KSH1YNL024C-A RPA190P10964 1664 aaKnown RBP10.22□□□□□ -0.77
KSH1YNL024C-A DNF1P32660 1571 aa10.2□□□□□ -0.78
KSH1YNL024C-A CHD1P32657 1468 aa10.19□□□□□ -0.78
KSH1YNL024C-A RKR1Q04781 1562 aa10.16□□□□□ -0.78
KSH1YNL024C-A MET5P47169 1442 aa10.13□□□□□ -0.79
KSH1YNL024C-A PAN1P32521 1480 aa10.11□□□□□ -0.79
KSH1YNL024C-A RPL17AP05740 184 aaKnown RBP10.11□□□□□ -0.79
KSH1YNL024C-A RPL17BP46990 184 aaKnown RBP10.11□□□□□ -0.79
KSH1YNL024C-A POL1P13382 1468 aa10.08□□□□□ -0.8
KSH1YNL024C-A TOP2P06786 1428 aaKnown RBP10.07□□□□□ -0.8
KSH1YNL024C-A TY1B-JR2P47100 1755 aaKnown RBP10.07□□□□□ -0.8
KSH1YNL024C-A TY1B-ER2Q03619 1755 aa10.07□□□□□ -0.8
KSH1YNL024C-A TY1B-MR1Q04214 1755 aa10.07□□□□□ -0.8
KSH1YNL024C-A TY1B-MR2Q04670 1755 aaKnown RBP10.07□□□□□ -0.8
KSH1YNL024C-A TY1B-LR1Q12088 1755 aaKnown RBP10.07□□□□□ -0.8
KSH1YNL024C-A TY1B-NL1Q12112 1755 aa10.07□□□□□ -0.8
KSH1YNL024C-A TY1B-GR1Q12141 1755 aa10.07□□□□□ -0.8
KSH1YNL024C-A TY1B-BLQ12490 1755 aa10.07□□□□□ -0.8
KSH1YNL024C-A RQC2Q12532 1038 aaKnown RBP10.06□□□□□ -0.8
KSH1YNL024C-A YRF1-1P0CX20 1796 aa10.05□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms