RNA–Protein interactions for RNA: YMR292W

GOT1, Transcript of Homodimeric protein that is packaged into COPII vesicles, yeastyeast

Gene GOT1, Length 417 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GOT1YMR292W MTC1P47018 478 aaKnown RBP8.52□□□□□ -1.05
GOT1YMR292W FAP1P53971 965 aa8.04□□□□□ -1.12
GOT1YMR292W DRS1P32892 752 aaKnown RBP7.8□□□□□ -1.16
GOT1YMR292W PRY3P47033 881 aa7.62□□□□□ -1.19
GOT1YMR292W PRI1P10363 409 aa7.25□□□□□ -1.25
GOT1YMR292W AAD16Q02895 342 aa7.25□□□□□ -1.25
GOT1YMR292W YCK3P39962 524 aa7.14□□□□□ -1.27
GOT1YMR292W ISW2Q08773 1120 aa7.14□□□□□ -1.27
GOT1YMR292W HAA1Q12753 694 aaKnown RBP7.09□□□□□ -1.27
GOT1YMR292W RPG1P38249 964 aaKnown RBP7.01□□□□□ -1.29
GOT1YMR292W DIP2Q12220 943 aaPredicted RBP6.89□□□□□ -1.31
GOT1YMR292W TSR3Q12094 313 aaKnown RBP6.82□□□□□ -1.32
GOT1YMR292W RSE1Q04693 1361 aaKnown RBP6.73□□□□□ -1.33
GOT1YMR292W MRPL32P25348 183 aa6.62□□□□□ -1.35
GOT1YMR292W AVT3P36062 692 aa6.58□□□□□ -1.36
GOT1YMR292W REB1P21538 810 aa6.52□□□□□ -1.37
GOT1YMR292W RPL17AP05740 184 aaKnown RBP6.5□□□□□ -1.37
GOT1YMR292W RPL17BP46990 184 aaKnown RBP6.5□□□□□ -1.37
GOT1YMR292W BUD31P25337 157 aaPredicted RBP6.43□□□□□ -1.38
GOT1YMR292W BFR2Q06631 534 aaKnown RBP6.43□□□□□ -1.38
GOT1YMR292W YGL015CP33199 130 aa6.4□□□□□ -1.38
GOT1YMR292W SPT21P35209 758 aa6.18□□□□□ -1.42
GOT1YMR292W CDC27P38042 758 aa6.18□□□□□ -1.42
GOT1YMR292W YKR023WP36119 530 aaKnown RBP6.14□□□□□ -1.43
GOT1YMR292W UBP10P53874 792 aaPredicted RBP6.12□□□□□ -1.43
GOT1YMR292W TFC8Q12308 588 aa6.04□□□□□ -1.44
GOT1YMR292W MAP2P38174 421 aaKnown RBP6.03□□□□□ -1.44
GOT1YMR292W HOP09932 586 aa6.01□□□□□ -1.45
GOT1YMR292W SGS1P35187 1447 aa5.99□□□□□ -1.45
GOT1YMR292W RIM101P33400 625 aa5.97□□□□□ -1.45
GOT1YMR292W SIS1P25294 352 aaKnown RBP5.96□□□□□ -1.46
GOT1YMR292W DCD1P06773 312 aa5.95□□□□□ -1.46
GOT1YMR292W TIF4632P39936 914 aaKnown RBP5.89□□□□□ -1.47
GOT1YMR292W SCY1P53009 804 aa5.89□□□□□ -1.47
GOT1YMR292W SLX5P32828 619 aaKnown RBP5.87□□□□□ -1.47
GOT1YMR292W TGL3P40308 642 aa5.85□□□□□ -1.47
GOT1YMR292W INO80P53115 1489 aa5.83□□□□□ -1.48
GOT1YMR292W BCH2P36122 765 aa5.82□□□□□ -1.48
GOT1YMR292W TCB3Q03640 1545 aaKnown RBP5.79□□□□□ -1.48
GOT1YMR292W TY1B-DR4Q07793 1604 aa5.77□□□□□ -1.48
GOT1YMR292W MON2P48563 1636 aaPredicted RBP5.77□□□□□ -1.49
GOT1YMR292W UBP9P39967 754 aa5.75□□□□□ -1.49
GOT1YMR292W OXP1P28273 1286 aa5.72□□□□□ -1.49
GOT1YMR292W YIL055CP40523 627 aaKnown RBP5.72□□□□□ -1.49
GOT1YMR292W SSN2P38931 1420 aa5.7□□□□□ -1.5
GOT1YMR292W PTP3P40048 928 aa5.69□□□□□ -1.5
GOT1YMR292W TFA1P36100 482 aa5.68□□□□□ -1.5
GOT1YMR292W EPS1P40557 701 aa5.68□□□□□ -1.5
GOT1YMR292W SPA2P23201 1466 aaKnown RBP5.67□□□□□ -1.5
GOT1YMR292W BDF1P35817 686 aa5.66□□□□□ -1.5
GOT1YMR292W SWR1Q05471 1514 aa5.65□□□□□ -1.5
GOT1YMR292W HSL1P34244 1518 aa5.64□□□□□ -1.51
GOT1YMR292W BBC1P47068 1157 aa5.62□□□□□ -1.51
GOT1YMR292W SPT6P23615 1451 aaKnown RBP5.62□□□□□ -1.51
GOT1YMR292W RSM7P47150 247 aa5.61□□□□□ -1.51
GOT1YMR292W MST1P07236 462 aa5.57□□□□□ -1.52
GOT1YMR292W AI2P03876 854 aa5.56□□□□□ -1.52
GOT1YMR292W NSR1P27476 414 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
GOT1YMR292W YOR238WQ08634 303 aa5.56□□□□□ -1.52
GOT1YMR292W HIR3P47171 1648 aa5.55□□□□□ -1.52
GOT1YMR292W YAH1Q12184 172 aaKnown RBP5.54□□□□□ -1.52
GOT1YMR292W DNA2P38859 1522 aa5.51□□□□□ -1.53
GOT1YMR292W YAP5P40574 245 aa5.5□□□□□ -1.53
GOT1YMR292W XRN1P22147 1528 aaKnown RBP5.49□□□□□ -1.53
GOT1YMR292W YBL029C-AQ3E756 94 aa5.46□□□□□ -1.54
GOT1YMR292W YLR271WQ06152 274 aa5.45□□□□□ -1.54
GOT1YMR292W KOG1P38873 1557 aa5.44□□□□□ -1.54
GOT1YMR292W VNX1P42839 908 aa5.43□□□□□ -1.54
GOT1YMR292W REV3P14284 1504 aa5.42□□□□□ -1.54
GOT1YMR292W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
GOT1YMR292W GTT3P39996 337 aa5.4□□□□□ -1.54
GOT1YMR292W PSD2P53037 1138 aaKnown RBP5.4□□□□□ -1.54
GOT1YMR292W SSP1P38871 571 aa5.39□□□□□ -1.55
GOT1YMR292W SPP1Q03012 353 aa5.39□□□□□ -1.55
GOT1YMR292W WSC3Q12215 556 aa5.37□□□□□ -1.55
GOT1YMR292W TAF2P23255 1407 aa5.37□□□□□ -1.55
GOT1YMR292W SIN3P22579 1536 aa5.36□□□□□ -1.55
GOT1YMR292W ECM5Q03214 1411 aa5.35□□□□□ -1.55
GOT1YMR292W THO2P53552 1597 aaKnown RBP5.34□□□□□ -1.55
GOT1YMR292W SSK2P53599 1579 aa5.34□□□□□ -1.55
GOT1YMR292W MRM1P25270 412 aa5.34□□□□□ -1.55
GOT1YMR292W TIF11P38912 153 aaKnown RBP5.34□□□□□ -1.55
GOT1YMR292W BUD4P47136 1447 aa5.33□□□□□ -1.56
GOT1YMR292W ATG2P53855 1592 aa5.31□□□□□ -1.56
GOT1YMR292W ESP1Q03018 1630 aa5.3□□□□□ -1.56
GOT1YMR292W MGA2P40578 1113 aa5.28□□□□□ -1.56
GOT1YMR292W YJL171CP46992 396 aa5.28□□□□□ -1.56
GOT1YMR292W MSB4Q12317 492 aa5.28□□□□□ -1.56
GOT1YMR292W PEP1P32319 1579 aa5.28□□□□□ -1.56
GOT1YMR292W SKI3P17883 1432 aaKnown RBP5.27□□□□□ -1.57
GOT1YMR292W EAP1P36041 632 aaKnown RBP5.27□□□□□ -1.57
GOT1YMR292W FKH1P40466 484 aa5.27□□□□□ -1.57
GOT1YMR292W ULI1P43604 169 aa5.27□□□□□ -1.57
GOT1YMR292W RTG3P38165 486 aa5.26□□□□□ -1.57
GOT1YMR292W YMR1P47147 688 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
GOT1YMR292W PIB1Q06651 286 aa5.26□□□□□ -1.57
GOT1YMR292W AIR2Q12476 344 aaKnown RBP5.26□□□□□ -1.57
GOT1YMR292W MDS3P53094 1487 aa5.26□□□□□ -1.57
GOT1YMR292W LDB19Q12502 818 aa5.24□□□□□ -1.57
GOT1YMR292W CST9Q06032 482 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms