RNA–Protein interactions for RNA: YMR239C

RNT1, Transcript of Nuclear dsRNA-specific ribonuclease (RNase III), yeastyeast

Gene RNT1, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNT1YMR239C FAP1P53971 965 aa14.33□□□□□ -0.11
RNT1YMR239C MTC1P47018 478 aaKnown RBP14.15□□□□□ -0.14
RNT1YMR239C PRY3P47033 881 aa13.56□□□□□ -0.24
RNT1YMR239C AAD16Q02895 342 aa12.88□□□□□ -0.35
RNT1YMR239C YCK3P39962 524 aa12.86□□□□□ -0.35
RNT1YMR239C PRI1P10363 409 aa12.79□□□□□ -0.36
RNT1YMR239C HAA1Q12753 694 aaKnown RBP12.68□□□□□ -0.38
RNT1YMR239C ISW2Q08773 1120 aa12.03□□□□□ -0.48
RNT1YMR239C TSR3Q12094 313 aaKnown RBP11.96□□□□□ -0.49
RNT1YMR239C RPG1P38249 964 aaKnown RBP11.95□□□□□ -0.5
RNT1YMR239C DRS1P32892 752 aaKnown RBP11.77□□□□□ -0.52
RNT1YMR239C MRPL32P25348 183 aa11.51□□□□□ -0.57
RNT1YMR239C YGL015CP33199 130 aa11.47□□□□□ -0.57
RNT1YMR239C BUD31P25337 157 aaPredicted RBP11.18□□□□□ -0.62
RNT1YMR239C RSE1Q04693 1361 aaKnown RBP10.87□□□□□ -0.67
RNT1YMR239C DIP2Q12220 943 aaPredicted RBP10.81□□□□□ -0.68
RNT1YMR239C CDC27P38042 758 aa10.69□□□□□ -0.7
RNT1YMR239C REB1P21538 810 aa10.67□□□□□ -0.7
RNT1YMR239C RPL17AP05740 184 aaKnown RBP10.6□□□□□ -0.71
RNT1YMR239C RPL17BP46990 184 aaKnown RBP10.6□□□□□ -0.71
RNT1YMR239C UBP10P53874 792 aaPredicted RBP10.58□□□□□ -0.72
RNT1YMR239C MAP2P38174 421 aaKnown RBP10.51□□□□□ -0.73
RNT1YMR239C SIS1P25294 352 aaKnown RBP10.47□□□□□ -0.73
RNT1YMR239C YKR023WP36119 530 aaKnown RBP10.32□□□□□ -0.76
RNT1YMR239C UBP9P39967 754 aa10.26□□□□□ -0.77
RNT1YMR239C TGL3P40308 642 aa10.16□□□□□ -0.78
RNT1YMR239C TIF4632P39936 914 aaKnown RBP10.13□□□□□ -0.79
RNT1YMR239C SPT21P35209 758 aa10.09□□□□□ -0.79
RNT1YMR239C TFC8Q12308 588 aa10.09□□□□□ -0.79
RNT1YMR239C HOP09932 586 aa10.07□□□□□ -0.8
RNT1YMR239C DCD1P06773 312 aa10.05□□□□□ -0.8
RNT1YMR239C AVT3P36062 692 aa10.04□□□□□ -0.8
RNT1YMR239C SCY1P53009 804 aa10.02□□□□□ -0.81
RNT1YMR239C SLX5P32828 619 aaKnown RBP9.99□□□□□ -0.81
RNT1YMR239C BFR2Q06631 534 aaKnown RBP9.85□□□□□ -0.83
RNT1YMR239C BCH2P36122 765 aa9.7□□□□□ -0.86
RNT1YMR239C YBL029C-AQ3E756 94 aa9.59□□□□□ -0.87
RNT1YMR239C MST1P07236 462 aa9.58□□□□□ -0.88
RNT1YMR239C VNX1P42839 908 aa9.46□□□□□ -0.9
RNT1YMR239C YOR238WQ08634 303 aa9.42□□□□□ -0.9
RNT1YMR239C RIM101P33400 625 aa9.41□□□□□ -0.9
RNT1YMR239C AIR2Q12476 344 aaKnown RBP9.36□□□□□ -0.91
RNT1YMR239C BDF1P35817 686 aa9.35□□□□□ -0.91
RNT1YMR239C EPS1P40557 701 aa9.34□□□□□ -0.91
RNT1YMR239C SPP1Q03012 353 aa9.34□□□□□ -0.91
RNT1YMR239C NSR1P27476 414 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
RNT1YMR239C YJL171CP46992 396 aa9.29□□□□□ -0.92
RNT1YMR239C FKH1P40466 484 aa9.28□□□□□ -0.92
RNT1YMR239C WSC3Q12215 556 aa9.21□□□□□ -0.94
RNT1YMR239C TIF11P38912 153 aaKnown RBP9.17□□□□□ -0.94
RNT1YMR239C YAP5P40574 245 aa9.14□□□□□ -0.95
RNT1YMR239C BMT6Q12291 365 aa9.05□□□□□ -0.96
RNT1YMR239C OXP1P28273 1286 aa9.05□□□□□ -0.96
RNT1YMR239C LDB19Q12502 818 aa9.02□□□□□ -0.97
RNT1YMR239C IOC2Q12072 812 aa8.99□□□□□ -0.97
RNT1YMR239C GTT3P39996 337 aa8.96□□□□□ -0.98
RNT1YMR239C ULI1P43604 169 aa8.96□□□□□ -0.98
RNT1YMR239C PTP3P40048 928 aa8.89□□□□□ -0.99
RNT1YMR239C BBC1P47068 1157 aa8.89□□□□□ -0.99
RNT1YMR239C YIL055CP40523 627 aaKnown RBP8.86□□□□□ -0.99
RNT1YMR239C AI2P03876 854 aa8.8□□□□□ -1
RNT1YMR239C RSM7P47150 247 aa8.77□□□□□ -1.01
RNT1YMR239C RTG1P32607 177 aa8.74□□□□□ -1.01
RNT1YMR239C MSB4Q12317 492 aa8.74□□□□□ -1.01
RNT1YMR239C EAP1P36041 632 aaKnown RBP8.72□□□□□ -1.01
RNT1YMR239C NCR1Q12200 1170 aa8.71□□□□□ -1.01
RNT1YMR239C PIB1Q06651 286 aa8.69□□□□□ -1.02
RNT1YMR239C TFA1P36100 482 aa8.66□□□□□ -1.02
RNT1YMR239C TRP5P00931 707 aaKnown RBP8.63□□□□□ -1.03
RNT1YMR239C SEC61P32915 480 aa8.63□□□□□ -1.03
RNT1YMR239C YNL035CP53962 389 aaKnown RBP8.61□□□□□ -1.03
RNT1YMR239C BCK2P33306 851 aa8.6□□□□□ -1.03
RNT1YMR239C YOL036WQ08206 761 aa8.59□□□□□ -1.03
RNT1YMR239C SET4P42948 560 aa8.56□□□□□ -1.04
RNT1YMR239C YAH1Q12184 172 aaKnown RBP8.5□□□□□ -1.05
RNT1YMR239C RGA2Q06407 1009 aa8.49□□□□□ -1.05
RNT1YMR239C CHL1P22516 861 aaPredicted RBP8.46□□□□□ -1.05
RNT1YMR239C TFG1P41895 735 aaPredicted RBP8.46□□□□□ -1.06
RNT1YMR239C SAP30P38429 201 aa8.45□□□□□ -1.06
RNT1YMR239C PSD2P53037 1138 aaKnown RBP8.42□□□□□ -1.06
RNT1YMR239C DAN4P47179 1161 aa8.41□□□□□ -1.06
RNT1YMR239C MRM1P25270 412 aa8.39□□□□□ -1.07
RNT1YMR239C PRE3P38624 215 aa8.39□□□□□ -1.07
RNT1YMR239C SAM3Q08986 587 aa8.37□□□□□ -1.07
RNT1YMR239C YDL129WQ07555 291 aa8.37□□□□□ -1.07
RNT1YMR239C YLR271WQ06152 274 aa8.36□□□□□ -1.07
RNT1YMR239C VMA1P17255 1071 aaKnown RBP8.34□□□□□ -1.07
RNT1YMR239C JIP4Q03361 876 aa8.34□□□□□ -1.07
RNT1YMR239C YMR1P47147 688 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
RNT1YMR239C DBP1P24784 617 aaKnown RBP8.32□□□□□ -1.08
RNT1YMR239C XDJ1P39102 459 aa8.32□□□□□ -1.08
RNT1YMR239C VPS29P38759 282 aa8.29□□□□□ -1.08
RNT1YMR239C YFR006WP43590 535 aa8.26□□□□□ -1.09
RNT1YMR239C VRP1P37370 817 aa8.25□□□□□ -1.09
RNT1YMR239C STS1P38637 319 aa8.22□□□□□ -1.09
RNT1YMR239C ABP1P15891 592 aaKnown RBP8.2□□□□□ -1.1
RNT1YMR239C DPS1P04802 557 aaKnown RBP8.2□□□□□ -1.1
RNT1YMR239C RGA1P39083 1007 aa8.2□□□□□ -1.1
RNT1YMR239C PTC4P38089 393 aa8.17□□□□□ -1.1
RNT1YMR239C GYP5Q12344 894 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms