RNA–Protein interactions for RNA: YMR101C

SRT1, Transcript of Cis-prenyltransferase, yeastyeast

Gene SRT1, Length 1,032 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRT1YMR101C MTC1P47018 478 aaKnown RBP17.74■□□□□ 0.43
SRT1YMR101C FAP1P53971 965 aa16.88■□□□□ 0.29
SRT1YMR101C PRY3P47033 881 aa15.94■□□□□ 0.14
SRT1YMR101C DRS1P32892 752 aaKnown RBP15.55■□□□□ 0.08
SRT1YMR101C PRI1P10363 409 aa15.49■□□□□ 0.07
SRT1YMR101C AAD16Q02895 342 aa15.48■□□□□ 0.07
SRT1YMR101C YCK3P39962 524 aa15.24■□□□□ 0.03
SRT1YMR101C HAA1Q12753 694 aaKnown RBP14.94□□□□□ -0.02
SRT1YMR101C ISW2Q08773 1120 aa14.83□□□□□ -0.04
SRT1YMR101C RPG1P38249 964 aaKnown RBP14.73□□□□□ -0.05
SRT1YMR101C TSR3Q12094 313 aaKnown RBP14.54□□□□□ -0.08
SRT1YMR101C DIP2Q12220 943 aaPredicted RBP14□□□□□ -0.17
SRT1YMR101C MRPL32P25348 183 aa13.94□□□□□ -0.18
SRT1YMR101C RSE1Q04693 1361 aaKnown RBP13.78□□□□□ -0.2
SRT1YMR101C YGL015CP33199 130 aa13.66□□□□□ -0.22
SRT1YMR101C RPL17AP05740 184 aaKnown RBP13.4□□□□□ -0.26
SRT1YMR101C RPL17BP46990 184 aaKnown RBP13.4□□□□□ -0.26
SRT1YMR101C REB1P21538 810 aa13.38□□□□□ -0.27
SRT1YMR101C AVT3P36062 692 aa13.31□□□□□ -0.28
SRT1YMR101C CDC27P38042 758 aa13.17□□□□□ -0.3
SRT1YMR101C BUD31P25337 157 aaPredicted RBP12.99□□□□□ -0.33
SRT1YMR101C YKR023WP36119 530 aaKnown RBP12.93□□□□□ -0.34
SRT1YMR101C UBP10P53874 792 aaPredicted RBP12.9□□□□□ -0.34
SRT1YMR101C SPT21P35209 758 aa12.88□□□□□ -0.35
SRT1YMR101C MAP2P38174 421 aaKnown RBP12.84□□□□□ -0.35
SRT1YMR101C TFC8Q12308 588 aa12.64□□□□□ -0.39
SRT1YMR101C HOP09932 586 aa12.59□□□□□ -0.39
SRT1YMR101C DCD1P06773 312 aa12.57□□□□□ -0.4
SRT1YMR101C BFR2Q06631 534 aaKnown RBP12.46□□□□□ -0.41
SRT1YMR101C SCY1P53009 804 aa12.38□□□□□ -0.43
SRT1YMR101C TGL3P40308 642 aa12.33□□□□□ -0.44
SRT1YMR101C TIF4632P39936 914 aaKnown RBP12.3□□□□□ -0.44
SRT1YMR101C SLX5P32828 619 aaKnown RBP12.28□□□□□ -0.44
SRT1YMR101C RIM101P33400 625 aa12.2□□□□□ -0.46
SRT1YMR101C BCH2P36122 765 aa12.18□□□□□ -0.46
SRT1YMR101C SIS1P25294 352 aaKnown RBP12.17□□□□□ -0.46
SRT1YMR101C UBP9P39967 754 aa12.15□□□□□ -0.46
SRT1YMR101C BDF1P35817 686 aa11.79□□□□□ -0.52
SRT1YMR101C EPS1P40557 701 aa11.79□□□□□ -0.52
SRT1YMR101C MST1P07236 462 aa11.78□□□□□ -0.52
SRT1YMR101C OXP1P28273 1286 aa11.76□□□□□ -0.53
SRT1YMR101C YBL029C-AQ3E756 94 aa11.64□□□□□ -0.55
SRT1YMR101C YOR238WQ08634 303 aa11.59□□□□□ -0.55
SRT1YMR101C NSR1P27476 414 aaKnown RBP RIP-Chip data11.58□□□□□ -0.56not detected
SRT1YMR101C VNX1P42839 908 aa11.51□□□□□ -0.57
SRT1YMR101C PTP3P40048 928 aa11.48□□□□□ -0.57
SRT1YMR101C YIL055CP40523 627 aaKnown RBP11.44□□□□□ -0.58
SRT1YMR101C YAP5P40574 245 aa11.38□□□□□ -0.59
SRT1YMR101C RSM7P47150 247 aa11.36□□□□□ -0.59
SRT1YMR101C BBC1P47068 1157 aa11.35□□□□□ -0.59
SRT1YMR101C SPP1Q03012 353 aa11.34□□□□□ -0.59
SRT1YMR101C AI2P03876 854 aa11.33□□□□□ -0.6
SRT1YMR101C AIR2Q12476 344 aaKnown RBP11.28□□□□□ -0.6
SRT1YMR101C WSC3Q12215 556 aa11.27□□□□□ -0.61
SRT1YMR101C FKH1P40466 484 aa11.24□□□□□ -0.61
SRT1YMR101C TIF11P38912 153 aaKnown RBP11.21□□□□□ -0.61
SRT1YMR101C YAH1Q12184 172 aaKnown RBP11.16□□□□□ -0.62
SRT1YMR101C GTT3P39996 337 aa11.08□□□□□ -0.64
SRT1YMR101C YJL171CP46992 396 aa11.08□□□□□ -0.64
SRT1YMR101C IOC2Q12072 812 aa11.06□□□□□ -0.64
SRT1YMR101C YLR271WQ06152 274 aa11.04□□□□□ -0.64
SRT1YMR101C LDB19Q12502 818 aa11.04□□□□□ -0.64
SRT1YMR101C PSD2P53037 1138 aaKnown RBP11.01□□□□□ -0.65
SRT1YMR101C ULI1P43604 169 aa11□□□□□ -0.65
SRT1YMR101C PIB1Q06651 286 aa10.96□□□□□ -0.65
SRT1YMR101C BMT6Q12291 365 aa10.92□□□□□ -0.66
SRT1YMR101C MSB4Q12317 492 aa10.89□□□□□ -0.67
SRT1YMR101C MRM1P25270 412 aa10.86□□□□□ -0.67
SRT1YMR101C EAP1P36041 632 aaKnown RBP10.81□□□□□ -0.68
SRT1YMR101C YOL036WQ08206 761 aa10.78□□□□□ -0.68
SRT1YMR101C TRP5P00931 707 aaKnown RBP10.75□□□□□ -0.69
SRT1YMR101C RTG1P32607 177 aa10.75□□□□□ -0.69
SRT1YMR101C SET4P42948 560 aa10.74□□□□□ -0.69
SRT1YMR101C TFA1P36100 482 aa10.73□□□□□ -0.69
SRT1YMR101C VPS29P38759 282 aa10.72□□□□□ -0.69
SRT1YMR101C YMR1P47147 688 aaKnown RBP RIP-Chip data10.69□□□□□ -0.7not detected
SRT1YMR101C NCR1Q12200 1170 aa10.69□□□□□ -0.7
SRT1YMR101C DBP1P24784 617 aaKnown RBP10.67□□□□□ -0.7
SRT1YMR101C YNL035CP53962 389 aaKnown RBP10.67□□□□□ -0.7
SRT1YMR101C SEC61P32915 480 aa10.66□□□□□ -0.7
SRT1YMR101C SAM3Q08986 587 aa10.65□□□□□ -0.7
SRT1YMR101C VMA1P17255 1071 aaKnown RBP10.64□□□□□ -0.71
SRT1YMR101C STS1P38637 319 aa10.62□□□□□ -0.71
SRT1YMR101C SSP1P38871 571 aa10.62□□□□□ -0.71
SRT1YMR101C YFR006WP43590 535 aa10.61□□□□□ -0.71
SRT1YMR101C CST9Q06032 482 aa10.6□□□□□ -0.71
SRT1YMR101C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
SRT1YMR101C RTG3P38165 486 aa10.56□□□□□ -0.72
SRT1YMR101C DAN4P47179 1161 aa10.53□□□□□ -0.72
SRT1YMR101C MGA2P40578 1113 aa10.47□□□□□ -0.73
SRT1YMR101C RCR1P38212 213 aa10.45□□□□□ -0.74
SRT1YMR101C JIP4Q03361 876 aa10.44□□□□□ -0.74
SRT1YMR101C SAP30P38429 201 aa10.43□□□□□ -0.74
SRT1YMR101C TFG1P41895 735 aaPredicted RBP10.41□□□□□ -0.74
SRT1YMR101C ABP1P15891 592 aaKnown RBP10.4□□□□□ -0.74
SRT1YMR101C YDL129WQ07555 291 aa10.4□□□□□ -0.74
SRT1YMR101C BCK2P33306 851 aa10.39□□□□□ -0.75
SRT1YMR101C CHL1P22516 861 aaPredicted RBP10.37□□□□□ -0.75
SRT1YMR101C GYP5Q12344 894 aa10.37□□□□□ -0.75
SRT1YMR101C PRE3P38624 215 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms