RNA–Protein interactions for RNA: YML005W

TRM12, Transcript of S-adenosylmethionine-dependent methyltransferase, yeastyeast

Gene TRM12, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM12YML005W MTC1P47018 478 aaKnown RBP13.05□□□□□ -0.32
TRM12YML005W FAP1P53971 965 aa12.62□□□□□ -0.39
TRM12YML005W PRY3P47033 881 aa11.93□□□□□ -0.5
TRM12YML005W AAD16Q02895 342 aa11.54□□□□□ -0.56
TRM12YML005W PRI1P10363 409 aa11.53□□□□□ -0.56
TRM12YML005W YCK3P39962 524 aa11.47□□□□□ -0.57
TRM12YML005W DRS1P32892 752 aaKnown RBP11.21□□□□□ -0.61
TRM12YML005W HAA1Q12753 694 aaKnown RBP11.19□□□□□ -0.62
TRM12YML005W ISW2Q08773 1120 aa10.94□□□□□ -0.66
TRM12YML005W RPG1P38249 964 aaKnown RBP10.89□□□□□ -0.67
TRM12YML005W TSR3Q12094 313 aaKnown RBP10.8□□□□□ -0.68
TRM12YML005W MRPL32P25348 183 aa10.34□□□□□ -0.75
TRM12YML005W DIP2Q12220 943 aaPredicted RBP10.19□□□□□ -0.78
TRM12YML005W YGL015CP33199 130 aa10.18□□□□□ -0.78
TRM12YML005W RSE1Q04693 1361 aaKnown RBP10.09□□□□□ -0.79
TRM12YML005W RPL17AP05740 184 aaKnown RBP9.83□□□□□ -0.84
TRM12YML005W RPL17BP46990 184 aaKnown RBP9.83□□□□□ -0.84
TRM12YML005W REB1P21538 810 aa9.8□□□□□ -0.84
TRM12YML005W BUD31P25337 157 aaPredicted RBP9.78□□□□□ -0.84
TRM12YML005W CDC27P38042 758 aa9.76□□□□□ -0.85
TRM12YML005W AVT3P36062 692 aa9.64□□□□□ -0.87
TRM12YML005W BFR2Q06631 534 aaKnown RBP9.63□□□□□ -0.87
TRM12YML005W UBP10P53874 792 aaPredicted RBP9.56□□□□□ -0.88
TRM12YML005W YKR023WP36119 530 aaKnown RBP9.53□□□□□ -0.88
TRM12YML005W MAP2P38174 421 aaKnown RBP9.52□□□□□ -0.88
TRM12YML005W SPT21P35209 758 aa9.45□□□□□ -0.9
TRM12YML005W TFA1P36100 482 aa9.37□□□□□ -0.91
TRM12YML005W TFC8Q12308 588 aa9.31□□□□□ -0.92
TRM12YML005W HOP09932 586 aa9.26□□□□□ -0.93
TRM12YML005W DCD1P06773 312 aa9.25□□□□□ -0.93
TRM12YML005W TGL3P40308 642 aa9.16□□□□□ -0.94
TRM12YML005W SIS1P25294 352 aaKnown RBP9.14□□□□□ -0.95
TRM12YML005W SCY1P53009 804 aa9.14□□□□□ -0.95
TRM12YML005W TIF4632P39936 914 aaKnown RBP9.1□□□□□ -0.95
TRM12YML005W SLX5P32828 619 aaKnown RBP9.07□□□□□ -0.96
TRM12YML005W UBP9P39967 754 aa9.06□□□□□ -0.96
TRM12YML005W BCH2P36122 765 aa8.97□□□□□ -0.97
TRM12YML005W RIM101P33400 625 aa8.91□□□□□ -0.98
TRM12YML005W MST1P07236 462 aa8.73□□□□□ -1.01
TRM12YML005W BDF1P35817 686 aa8.66□□□□□ -1.02
TRM12YML005W EPS1P40557 701 aa8.66□□□□□ -1.02
TRM12YML005W YBL029C-AQ3E756 94 aa8.65□□□□□ -1.02
TRM12YML005W OXP1P28273 1286 aa8.59□□□□□ -1.03
TRM12YML005W YOR238WQ08634 303 aa8.56□□□□□ -1.04
TRM12YML005W NSR1P27476 414 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
TRM12YML005W VNX1P42839 908 aa8.54□□□□□ -1.04
TRM12YML005W AIR2Q12476 344 aaKnown RBP8.41□□□□□ -1.06
TRM12YML005W SPP1Q03012 353 aa8.4□□□□□ -1.06
TRM12YML005W YAP5P40574 245 aa8.37□□□□□ -1.07
TRM12YML005W FKH1P40466 484 aa8.36□□□□□ -1.07
TRM12YML005W PTP3P40048 928 aa8.34□□□□□ -1.07
TRM12YML005W WSC3Q12215 556 aa8.34□□□□□ -1.07
TRM12YML005W TIF11P38912 153 aaKnown RBP8.3□□□□□ -1.08
TRM12YML005W YIL055CP40523 627 aaKnown RBP8.3□□□□□ -1.08
TRM12YML005W BBC1P47068 1157 aa8.27□□□□□ -1.09
TRM12YML005W RSM7P47150 247 aa8.27□□□□□ -1.09
TRM12YML005W RQC2Q12532 1038 aaKnown RBP8.27□□□□□ -1.09
TRM12YML005W AI2P03876 854 aa8.26□□□□□ -1.09
TRM12YML005W YJL171CP46992 396 aa8.22□□□□□ -1.09
TRM12YML005W IOC2Q12072 812 aa8.2□□□□□ -1.1
TRM12YML005W LDB19Q12502 818 aa8.16□□□□□ -1.1
TRM12YML005W GTT3P39996 337 aa8.14□□□□□ -1.11
TRM12YML005W ULI1P43604 169 aa8.13□□□□□ -1.11
TRM12YML005W BMT6Q12291 365 aa8.11□□□□□ -1.11
TRM12YML005W YAH1Q12184 172 aaKnown RBP8.08□□□□□ -1.12
TRM12YML005W PIB1Q06651 286 aa8.04□□□□□ -1.12
TRM12YML005W PSD2P53037 1138 aaKnown RBP8.01□□□□□ -1.13
TRM12YML005W YLR271WQ06152 274 aa8□□□□□ -1.13
TRM12YML005W MSB4Q12317 492 aa8□□□□□ -1.13
TRM12YML005W RTG1P32607 177 aa7.95□□□□□ -1.14
TRM12YML005W EAP1P36041 632 aaKnown RBP7.95□□□□□ -1.14
TRM12YML005W DMA1P38823 416 aa7.93□□□□□ -1.14
TRM12YML005W YOL036WQ08206 761 aa7.93□□□□□ -1.14
TRM12YML005W TRP5P00931 707 aaKnown RBP7.92□□□□□ -1.14
TRM12YML005W MRM1P25270 412 aa7.9□□□□□ -1.14
TRM12YML005W NCR1Q12200 1170 aa7.9□□□□□ -1.14
TRM12YML005W SET4P42948 560 aa7.89□□□□□ -1.15
TRM12YML005W YNL035CP53962 389 aaKnown RBP7.87□□□□□ -1.15
TRM12YML005W SEC61P32915 480 aa7.86□□□□□ -1.15
TRM12YML005W VPS29P38759 282 aa7.84□□□□□ -1.16
TRM12YML005W SAM3Q08986 587 aa7.82□□□□□ -1.16
TRM12YML005W YMR1P47147 688 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
TRM12YML005W DBP1P24784 617 aaKnown RBP7.79□□□□□ -1.16
TRM12YML005W VMA1P17255 1071 aaKnown RBP7.78□□□□□ -1.16
TRM12YML005W DAN4P47179 1161 aa7.76□□□□□ -1.17
TRM12YML005W STS1P38637 319 aa7.75□□□□□ -1.17
TRM12YML005W YFR006WP43590 535 aa7.74□□□□□ -1.17
TRM12YML005W SSP1P38871 571 aa7.72□□□□□ -1.17
TRM12YML005W BCK2P33306 851 aa7.71□□□□□ -1.18
TRM12YML005W SAP30P38429 201 aa7.7□□□□□ -1.18
TRM12YML005W RTG3P38165 486 aa7.68□□□□□ -1.18
TRM12YML005W CHL1P22516 861 aaPredicted RBP7.67□□□□□ -1.18
TRM12YML005W JIP4Q03361 876 aa7.67□□□□□ -1.18
TRM12YML005W CST9Q06032 482 aa7.67□□□□□ -1.18
TRM12YML005W YDL129WQ07555 291 aa7.66□□□□□ -1.18
TRM12YML005W TFG1P41895 735 aaPredicted RBP7.65□□□□□ -1.18
TRM12YML005W PRE3P38624 215 aa7.63□□□□□ -1.19
TRM12YML005W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
TRM12YML005W ABP1P15891 592 aaKnown RBP7.6□□□□□ -1.19
TRM12YML005W RCR1P38212 213 aa7.59□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms