RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C MTC1P47018 478 aaKnown RBP7.92□□□□□ -1.14
SIR3YLR442C FAP1P53971 965 aa7.51□□□□□ -1.21
SIR3YLR442C PRY3P47033 881 aa7.09□□□□□ -1.27
SIR3YLR442C DRS1P32892 752 aaKnown RBP6.94□□□□□ -1.3
SIR3YLR442C PRI1P10363 409 aa6.92□□□□□ -1.3
SIR3YLR442C AAD16Q02895 342 aa6.9□□□□□ -1.3
SIR3YLR442C YCK3P39962 524 aa6.77□□□□□ -1.33
SIR3YLR442C HAA1Q12753 694 aaKnown RBP6.68□□□□□ -1.34
SIR3YLR442C ISW2Q08773 1120 aa6.64□□□□□ -1.35
SIR3YLR442C RPG1P38249 964 aaKnown RBP6.57□□□□□ -1.36
SIR3YLR442C TSR3Q12094 313 aaKnown RBP6.46□□□□□ -1.37
SIR3YLR442C DIP2Q12220 943 aaPredicted RBP6.26□□□□□ -1.41
SIR3YLR442C MRPL32P25348 183 aa6.22□□□□□ -1.41
SIR3YLR442C RSE1Q04693 1361 aaKnown RBP6.16□□□□□ -1.42
SIR3YLR442C YGL015CP33199 130 aa6.11□□□□□ -1.43
SIR3YLR442C REB1P21538 810 aa5.98□□□□□ -1.45
SIR3YLR442C RPL17AP05740 184 aaKnown RBP5.97□□□□□ -1.45
SIR3YLR442C RPL17BP46990 184 aaKnown RBP5.97□□□□□ -1.45
SIR3YLR442C AVT3P36062 692 aa5.95□□□□□ -1.46
SIR3YLR442C CDC27P38042 758 aa5.86□□□□□ -1.47
SIR3YLR442C BUD31P25337 157 aaPredicted RBP5.81□□□□□ -1.48
SIR3YLR442C UBP10P53874 792 aaPredicted RBP5.78□□□□□ -1.48
SIR3YLR442C YKR023WP36119 530 aaKnown RBP5.77□□□□□ -1.49
SIR3YLR442C SPT21P35209 758 aa5.75□□□□□ -1.49
SIR3YLR442C MAP2P38174 421 aaKnown RBP5.71□□□□□ -1.49
SIR3YLR442C TFC8Q12308 588 aa5.64□□□□□ -1.51
SIR3YLR442C HOP09932 586 aa5.6□□□□□ -1.51
SIR3YLR442C DCD1P06773 312 aa5.58□□□□□ -1.52
SIR3YLR442C BFR2Q06631 534 aaKnown RBP5.57□□□□□ -1.52
SIR3YLR442C TGL3P40308 642 aa5.54□□□□□ -1.52
SIR3YLR442C TIF4632P39936 914 aaKnown RBP5.52□□□□□ -1.53
SIR3YLR442C SCY1P53009 804 aa5.51□□□□□ -1.53
SIR3YLR442C SLX5P32828 619 aaKnown RBP5.48□□□□□ -1.53
SIR3YLR442C UBP9P39967 754 aa5.46□□□□□ -1.54
SIR3YLR442C RIM101P33400 625 aa5.45□□□□□ -1.54
SIR3YLR442C SIS1P25294 352 aaKnown RBP5.44□□□□□ -1.54
SIR3YLR442C BCH2P36122 765 aa5.43□□□□□ -1.54
SIR3YLR442C MST1P07236 462 aa5.28□□□□□ -1.56
SIR3YLR442C EPS1P40557 701 aa5.27□□□□□ -1.57
SIR3YLR442C BDF1P35817 686 aa5.26□□□□□ -1.57
SIR3YLR442C OXP1P28273 1286 aa5.24□□□□□ -1.57
SIR3YLR442C NSR1P27476 414 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SIR3YLR442C YBL029C-AQ3E756 94 aa5.2□□□□□ -1.58
SIR3YLR442C YOR238WQ08634 303 aa5.19□□□□□ -1.58
SIR3YLR442C VNX1P42839 908 aa5.14□□□□□ -1.59
SIR3YLR442C PTP3P40048 928 aa5.13□□□□□ -1.59
SIR3YLR442C YIL055CP40523 627 aaKnown RBP5.12□□□□□ -1.59
SIR3YLR442C YAP5P40574 245 aa5.1□□□□□ -1.59
SIR3YLR442C BBC1P47068 1157 aa5.09□□□□□ -1.59
SIR3YLR442C RSM7P47150 247 aa5.07□□□□□ -1.6
SIR3YLR442C SPP1Q03012 353 aa5.07□□□□□ -1.6
SIR3YLR442C AI2P03876 854 aa5.07□□□□□ -1.6
SIR3YLR442C AIR2Q12476 344 aaKnown RBP5.04□□□□□ -1.6
SIR3YLR442C FKH1P40466 484 aa5.03□□□□□ -1.6
SIR3YLR442C WSC3Q12215 556 aa5.02□□□□□ -1.61
SIR3YLR442C TIF11P38912 153 aaKnown RBP5.02□□□□□ -1.61
SIR3YLR442C YJL171CP46992 396 aa4.96□□□□□ -1.61
SIR3YLR442C GTT3P39996 337 aa4.96□□□□□ -1.62
SIR3YLR442C YAH1Q12184 172 aaKnown RBP4.96□□□□□ -1.62
SIR3YLR442C IOC2Q12072 812 aa4.95□□□□□ -1.62
SIR3YLR442C LDB19Q12502 818 aa4.94□□□□□ -1.62
SIR3YLR442C PSD2P53037 1138 aaKnown RBP4.93□□□□□ -1.62
SIR3YLR442C YLR271WQ06152 274 aa4.92□□□□□ -1.62
SIR3YLR442C ULI1P43604 169 aa4.92□□□□□ -1.62
SIR3YLR442C BMT6Q12291 365 aa4.9□□□□□ -1.63
SIR3YLR442C MSB4Q12317 492 aa4.9□□□□□ -1.63
SIR3YLR442C EAP1P36041 632 aaKnown RBP4.86□□□□□ -1.63
SIR3YLR442C PIB1Q06651 286 aa4.86□□□□□ -1.63
SIR3YLR442C MRM1P25270 412 aa4.84□□□□□ -1.63
SIR3YLR442C TFA1P36100 482 aa4.84□□□□□ -1.63
SIR3YLR442C YOL036WQ08206 761 aa4.82□□□□□ -1.64
SIR3YLR442C RTG1P32607 177 aa4.82□□□□□ -1.64
SIR3YLR442C TRP5P00931 707 aaKnown RBP4.8□□□□□ -1.64
SIR3YLR442C YMR1P47147 688 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
SIR3YLR442C SEC61P32915 480 aa4.79□□□□□ -1.64
SIR3YLR442C SET4P42948 560 aa4.79□□□□□ -1.64
SIR3YLR442C NCR1Q12200 1170 aa4.79□□□□□ -1.64
SIR3YLR442C YNL035CP53962 389 aaKnown RBP4.78□□□□□ -1.64
SIR3YLR442C VPS29P38759 282 aa4.78□□□□□ -1.64
SIR3YLR442C SAM3Q08986 587 aa4.77□□□□□ -1.65
SIR3YLR442C DBP1P24784 617 aaKnown RBP4.76□□□□□ -1.65
SIR3YLR442C VMA1P17255 1071 aaKnown RBP4.76□□□□□ -1.65
SIR3YLR442C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
SIR3YLR442C SSP1P38871 571 aa4.74□□□□□ -1.65
SIR3YLR442C RTG3P38165 486 aa4.73□□□□□ -1.65
SIR3YLR442C STS1P38637 319 aa4.73□□□□□ -1.65
SIR3YLR442C DAN4P47179 1161 aa4.72□□□□□ -1.65
SIR3YLR442C YFR006WP43590 535 aa4.72□□□□□ -1.65
SIR3YLR442C CST9Q06032 482 aa4.71□□□□□ -1.66
SIR3YLR442C ABP1P15891 592 aaKnown RBP4.69□□□□□ -1.66
SIR3YLR442C MGA2P40578 1113 aa4.69□□□□□ -1.66
SIR3YLR442C JIP4Q03361 876 aa4.69□□□□□ -1.66
SIR3YLR442C TFG1P41895 735 aaPredicted RBP4.68□□□□□ -1.66
SIR3YLR442C BCK2P33306 851 aa4.66□□□□□ -1.66
SIR3YLR442C CHL1P22516 861 aaPredicted RBP4.66□□□□□ -1.66
SIR3YLR442C SAP30P38429 201 aa4.66□□□□□ -1.66
SIR3YLR442C YDL129WQ07555 291 aa4.66□□□□□ -1.66
SIR3YLR442C RCR1P38212 213 aa4.64□□□□□ -1.67
SIR3YLR442C GYP5Q12344 894 aa4.64□□□□□ -1.67
SIR3YLR442C PRE3P38624 215 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms