RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W MTC1P47018 478 aaKnown RBP13.8□□□□□ -0.2
BER1YLR412W FAP1P53971 965 aa13.43□□□□□ -0.26
BER1YLR412W PRY3P47033 881 aa12.67□□□□□ -0.38
BER1YLR412W AAD16Q02895 342 aa12.23□□□□□ -0.45
BER1YLR412W PRI1P10363 409 aa12.19□□□□□ -0.46
BER1YLR412W YCK3P39962 524 aa12□□□□□ -0.49
BER1YLR412W HAA1Q12753 694 aaKnown RBP11.91□□□□□ -0.5
BER1YLR412W DRS1P32892 752 aaKnown RBP11.88□□□□□ -0.51
BER1YLR412W ISW2Q08773 1120 aa11.64□□□□□ -0.55
BER1YLR412W RPG1P38249 964 aaKnown RBP11.53□□□□□ -0.56
BER1YLR412W TSR3Q12094 313 aaKnown RBP11.42□□□□□ -0.58
BER1YLR412W MRPL32P25348 183 aa11□□□□□ -0.65
BER1YLR412W YGL015CP33199 130 aa10.85□□□□□ -0.67
BER1YLR412W DIP2Q12220 943 aaPredicted RBP10.79□□□□□ -0.68
BER1YLR412W RSE1Q04693 1361 aaKnown RBP10.71□□□□□ -0.69
BER1YLR412W REB1P21538 810 aa10.44□□□□□ -0.74
BER1YLR412W RPL17AP05740 184 aaKnown RBP10.41□□□□□ -0.74
BER1YLR412W RPL17BP46990 184 aaKnown RBP10.41□□□□□ -0.74
BER1YLR412W BUD31P25337 157 aaPredicted RBP10.38□□□□□ -0.75
BER1YLR412W CDC27P38042 758 aa10.28□□□□□ -0.76
BER1YLR412W AVT3P36062 692 aa10.16□□□□□ -0.78
BER1YLR412W UBP10P53874 792 aaPredicted RBP10.16□□□□□ -0.78
BER1YLR412W MAP2P38174 421 aaKnown RBP10.06□□□□□ -0.8
BER1YLR412W YKR023WP36119 530 aaKnown RBP10.04□□□□□ -0.8
BER1YLR412W SPT21P35209 758 aa9.94□□□□□ -0.82
BER1YLR412W TFC8Q12308 588 aa9.83□□□□□ -0.84
BER1YLR412W BFR2Q06631 534 aaKnown RBP9.81□□□□□ -0.84
BER1YLR412W HOP09932 586 aa9.78□□□□□ -0.84
BER1YLR412W DCD1P06773 312 aa9.75□□□□□ -0.85
BER1YLR412W SIS1P25294 352 aaKnown RBP9.75□□□□□ -0.85
BER1YLR412W TGL3P40308 642 aa9.74□□□□□ -0.85
BER1YLR412W TIF4632P39936 914 aaKnown RBP9.72□□□□□ -0.85
BER1YLR412W UBP9P39967 754 aa9.7□□□□□ -0.86
BER1YLR412W SCY1P53009 804 aa9.67□□□□□ -0.86
BER1YLR412W SLX5P32828 619 aaKnown RBP9.63□□□□□ -0.87
BER1YLR412W BCH2P36122 765 aa9.46□□□□□ -0.9
BER1YLR412W RIM101P33400 625 aa9.4□□□□□ -0.9
BER1YLR412W MST1P07236 462 aa9.25□□□□□ -0.93
BER1YLR412W BDF1P35817 686 aa9.15□□□□□ -0.94
BER1YLR412W EPS1P40557 701 aa9.15□□□□□ -0.94
BER1YLR412W YBL029C-AQ3E756 94 aa9.15□□□□□ -0.94
BER1YLR412W YOR238WQ08634 303 aa9.11□□□□□ -0.95
BER1YLR412W VNX1P42839 908 aa9.06□□□□□ -0.96
BER1YLR412W NSR1P27476 414 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
BER1YLR412W OXP1P28273 1286 aa9.02□□□□□ -0.97
BER1YLR412W SPP1Q03012 353 aa8.94□□□□□ -0.98
BER1YLR412W YAP5P40574 245 aa8.91□□□□□ -0.98
BER1YLR412W TFA1P36100 482 aa8.9□□□□□ -0.98
BER1YLR412W AIR2Q12476 344 aaKnown RBP8.9□□□□□ -0.98
BER1YLR412W PTP3P40048 928 aa8.87□□□□□ -0.99
BER1YLR412W YIL055CP40523 627 aaKnown RBP8.86□□□□□ -0.99
BER1YLR412W FKH1P40466 484 aa8.84□□□□□ -0.99
BER1YLR412W WSC3Q12215 556 aa8.84□□□□□ -0.99
BER1YLR412W TIF11P38912 153 aaKnown RBP8.82□□□□□ -1
BER1YLR412W YJL171CP46992 396 aa8.82□□□□□ -1
BER1YLR412W BBC1P47068 1157 aa8.82□□□□□ -1
BER1YLR412W RSM7P47150 247 aa8.77□□□□□ -1.01
BER1YLR412W AI2P03876 854 aa8.75□□□□□ -1.01
BER1YLR412W GTT3P39996 337 aa8.7□□□□□ -1.02
BER1YLR412W LDB19Q12502 818 aa8.67□□□□□ -1.02
BER1YLR412W IOC2Q12072 812 aa8.66□□□□□ -1.02
BER1YLR412W BMT6Q12291 365 aa8.65□□□□□ -1.02
BER1YLR412W ULI1P43604 169 aa8.64□□□□□ -1.03
BER1YLR412W YAH1Q12184 172 aaKnown RBP8.55□□□□□ -1.04
BER1YLR412W MSB4Q12317 492 aa8.53□□□□□ -1.04
BER1YLR412W EAP1P36041 632 aaKnown RBP8.5□□□□□ -1.05
BER1YLR412W PIB1Q06651 286 aa8.49□□□□□ -1.05
BER1YLR412W RTG1P32607 177 aa8.44□□□□□ -1.06
BER1YLR412W PSD2P53037 1138 aaKnown RBP8.44□□□□□ -1.06
BER1YLR412W YLR271WQ06152 274 aa8.44□□□□□ -1.06
BER1YLR412W NCR1Q12200 1170 aa8.42□□□□□ -1.06
BER1YLR412W TRP5P00931 707 aaKnown RBP8.39□□□□□ -1.07
BER1YLR412W YOL036WQ08206 761 aa8.39□□□□□ -1.07
BER1YLR412W SEC61P32915 480 aa8.37□□□□□ -1.07
BER1YLR412W SET4P42948 560 aa8.37□□□□□ -1.07
BER1YLR412W MRM1P25270 412 aa8.36□□□□□ -1.07
BER1YLR412W YNL035CP53962 389 aaKnown RBP8.36□□□□□ -1.07
BER1YLR412W YMR1P47147 688 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
BER1YLR412W SAM3Q08986 587 aa8.27□□□□□ -1.09
BER1YLR412W DBP1P24784 617 aaKnown RBP8.25□□□□□ -1.09
BER1YLR412W VPS29P38759 282 aa8.25□□□□□ -1.09
BER1YLR412W VMA1P17255 1071 aaKnown RBP8.23□□□□□ -1.09
BER1YLR412W BCK2P33306 851 aa8.22□□□□□ -1.09
BER1YLR412W TFG1P41895 735 aaPredicted RBP8.22□□□□□ -1.09
BER1YLR412W DAN4P47179 1161 aa8.2□□□□□ -1.1
BER1YLR412W SAP30P38429 201 aa8.18□□□□□ -1.1
BER1YLR412W YFR006WP43590 535 aa8.18□□□□□ -1.1
BER1YLR412W JIP4Q03361 876 aa8.18□□□□□ -1.1
BER1YLR412W CHL1P22516 861 aaPredicted RBP8.17□□□□□ -1.1
BER1YLR412W STS1P38637 319 aa8.17□□□□□ -1.1
BER1YLR412W RTG3P38165 486 aa8.16□□□□□ -1.1
BER1YLR412W YDL129WQ07555 291 aa8.14□□□□□ -1.11
BER1YLR412W ABP1P15891 592 aaKnown RBP8.12□□□□□ -1.11
BER1YLR412W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
BER1YLR412W PRE3P38624 215 aa8.11□□□□□ -1.11
BER1YLR412W SSP1P38871 571 aa8.08□□□□□ -1.12
BER1YLR412W CST9Q06032 482 aa8.07□□□□□ -1.12
BER1YLR412W GYP5Q12344 894 aa8.06□□□□□ -1.12
BER1YLR412W HTA1P04911 132 aaKnown RBP8.04□□□□□ -1.12
BER1YLR412W HTA2P04912 132 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms