RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeastyeast

Gene APS1, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APS1YLR170C MTC1P47018 478 aaKnown RBP13.71□□□□□ -0.21
APS1YLR170C FAP1P53971 965 aa13.69□□□□□ -0.22
APS1YLR170C PRY3P47033 881 aa12.94□□□□□ -0.34
APS1YLR170C AAD16Q02895 342 aa12.27□□□□□ -0.45
APS1YLR170C YCK3P39962 524 aa12.25□□□□□ -0.45
APS1YLR170C PRI1P10363 409 aa12.22□□□□□ -0.45
APS1YLR170C HAA1Q12753 694 aaKnown RBP11.99□□□□□ -0.49
APS1YLR170C DRS1P32892 752 aaKnown RBP11.64□□□□□ -0.55
APS1YLR170C ISW2Q08773 1120 aa11.58□□□□□ -0.56
APS1YLR170C RPG1P38249 964 aaKnown RBP11.55□□□□□ -0.56
APS1YLR170C TSR3Q12094 313 aaKnown RBP11.53□□□□□ -0.56
APS1YLR170C MRPL32P25348 183 aa11.01□□□□□ -0.65
APS1YLR170C YGL015CP33199 130 aa10.86□□□□□ -0.67
APS1YLR170C DIP2Q12220 943 aaPredicted RBP10.61□□□□□ -0.71
APS1YLR170C RSE1Q04693 1361 aaKnown RBP10.57□□□□□ -0.72
APS1YLR170C BUD31P25337 157 aaPredicted RBP10.51□□□□□ -0.73
APS1YLR170C REB1P21538 810 aa10.39□□□□□ -0.75
APS1YLR170C RPL17AP05740 184 aaKnown RBP10.36□□□□□ -0.75
APS1YLR170C RPL17BP46990 184 aaKnown RBP10.36□□□□□ -0.75
APS1YLR170C CDC27P38042 758 aa10.34□□□□□ -0.75
APS1YLR170C MAP2P38174 421 aaKnown RBP10.13□□□□□ -0.79
APS1YLR170C UBP10P53874 792 aaPredicted RBP10.1□□□□□ -0.79
APS1YLR170C YKR023WP36119 530 aaKnown RBP10□□□□□ -0.81
APS1YLR170C AVT3P36062 692 aa9.91□□□□□ -0.82
APS1YLR170C SIS1P25294 352 aaKnown RBP9.89□□□□□ -0.83
APS1YLR170C DCD1P06773 312 aa9.85□□□□□ -0.83
APS1YLR170C SPT21P35209 758 aa9.83□□□□□ -0.84
APS1YLR170C HOP09932 586 aa9.81□□□□□ -0.84
APS1YLR170C TFC8Q12308 588 aa9.77□□□□□ -0.85
APS1YLR170C SCY1P53009 804 aa9.71□□□□□ -0.86
APS1YLR170C UBP9P39967 754 aa9.69□□□□□ -0.86
APS1YLR170C TIF4632P39936 914 aaKnown RBP9.67□□□□□ -0.86
APS1YLR170C TGL3P40308 642 aa9.65□□□□□ -0.86
APS1YLR170C SLX5P32828 619 aaKnown RBP9.61□□□□□ -0.87
APS1YLR170C BCH2P36122 765 aa9.42□□□□□ -0.9
APS1YLR170C YBL029C-AQ3E756 94 aa9.24□□□□□ -0.93
APS1YLR170C RIM101P33400 625 aa9.19□□□□□ -0.94
APS1YLR170C MON2P48563 1636 aaPredicted RBP9.19□□□□□ -0.94
APS1YLR170C MST1P07236 462 aa9.13□□□□□ -0.95
APS1YLR170C BFR2Q06631 534 aaKnown RBP9.1□□□□□ -0.95
APS1YLR170C SGS1P35187 1447 aa9.09□□□□□ -0.95
APS1YLR170C BDF1P35817 686 aa9.09□□□□□ -0.95
APS1YLR170C EPS1P40557 701 aa9.09□□□□□ -0.95
APS1YLR170C INO80P53115 1489 aa9.08□□□□□ -0.96
APS1YLR170C VNX1P42839 908 aa9.04□□□□□ -0.96
APS1YLR170C TCB3Q03640 1545 aaKnown RBP9.03□□□□□ -0.96
APS1YLR170C YOR238WQ08634 303 aa9.02□□□□□ -0.97
APS1YLR170C SPP1Q03012 353 aa8.95□□□□□ -0.98
APS1YLR170C TY1B-DR4Q07793 1604 aa8.94□□□□□ -0.98
APS1YLR170C WSC3Q12215 556 aa8.91□□□□□ -0.98
APS1YLR170C AIR2Q12476 344 aaKnown RBP8.9□□□□□ -0.98
APS1YLR170C OXP1P28273 1286 aa8.89□□□□□ -0.99
APS1YLR170C NSR1P27476 414 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99 RIP-Chip
APS1YLR170C SWR1Q05471 1514 aa8.86□□□□□ -0.99
APS1YLR170C FKH1P40466 484 aa8.85□□□□□ -0.99
APS1YLR170C YJL171CP46992 396 aa8.83□□□□□ -1
APS1YLR170C YAP5P40574 245 aa8.81□□□□□ -1
APS1YLR170C TIF11P38912 153 aaKnown RBP8.77□□□□□ -1.01
APS1YLR170C PTP3P40048 928 aa8.77□□□□□ -1.01
APS1YLR170C HSL1P34244 1518 aa8.7□□□□□ -1.02
APS1YLR170C DNA2P38859 1522 aa8.7□□□□□ -1.02
APS1YLR170C YIL055CP40523 627 aaKnown RBP8.69□□□□□ -1.02
APS1YLR170C LDB19Q12502 818 aa8.68□□□□□ -1.02
APS1YLR170C GTT3P39996 337 aa8.66□□□□□ -1.02
APS1YLR170C BBC1P47068 1157 aa8.66□□□□□ -1.02
APS1YLR170C SPT6P23615 1451 aaKnown RBP8.65□□□□□ -1.02
APS1YLR170C BMT6Q12291 365 aa8.63□□□□□ -1.03
APS1YLR170C KOG1P38873 1557 aa8.62□□□□□ -1.03
APS1YLR170C AI2P03876 854 aa8.62□□□□□ -1.03
APS1YLR170C ULI1P43604 169 aa8.6□□□□□ -1.03
APS1YLR170C IOC2Q12072 812 aa8.6□□□□□ -1.03
APS1YLR170C RSM7P47150 247 aa8.58□□□□□ -1.04
APS1YLR170C PIB1Q06651 286 aa8.55□□□□□ -1.04
APS1YLR170C SSN2P38931 1420 aa8.54□□□□□ -1.04
APS1YLR170C SPA2P23201 1466 aaKnown RBP8.53□□□□□ -1.04
APS1YLR170C HIR3P47171 1648 aa8.51□□□□□ -1.05
APS1YLR170C YAH1Q12184 172 aaKnown RBP8.47□□□□□ -1.05
APS1YLR170C RTG1P32607 177 aa8.39□□□□□ -1.07
APS1YLR170C MSB4Q12317 492 aa8.37□□□□□ -1.07
APS1YLR170C XRN1P22147 1528 aaKnown RBP8.37□□□□□ -1.07
APS1YLR170C TRP5P00931 707 aaKnown RBP8.34□□□□□ -1.07
APS1YLR170C EAP1P36041 632 aaKnown RBP8.34□□□□□ -1.07
APS1YLR170C SET4P42948 560 aa8.34□□□□□ -1.07
APS1YLR170C NCR1Q12200 1170 aa8.34□□□□□ -1.07
APS1YLR170C THO2P53552 1597 aaKnown RBP8.34□□□□□ -1.07
APS1YLR170C YOL036WQ08206 761 aa8.33□□□□□ -1.08
APS1YLR170C BUD4P47136 1447 aa8.32□□□□□ -1.08
APS1YLR170C ECM5Q03214 1411 aa8.32□□□□□ -1.08
APS1YLR170C MRM1P25270 412 aa8.27□□□□□ -1.09
APS1YLR170C REV3P14284 1504 aa8.26□□□□□ -1.09
APS1YLR170C PSD2P53037 1138 aaKnown RBP8.26□□□□□ -1.09
APS1YLR170C YLR271WQ06152 274 aa8.26□□□□□ -1.09
APS1YLR170C SIN3P22579 1536 aa8.25□□□□□ -1.09
APS1YLR170C YNL035CP53962 389 aaKnown RBP8.25□□□□□ -1.09
APS1YLR170C SEC61P32915 480 aa8.23□□□□□ -1.09
APS1YLR170C PEP1P32319 1579 aa8.22□□□□□ -1.09
APS1YLR170C MDS3P53094 1487 aa8.2□□□□□ -1.1
APS1YLR170C ATG2P53855 1592 aa8.18□□□□□ -1.1
APS1YLR170C BCK2P33306 851 aa8.18□□□□□ -1.1
APS1YLR170C SAP30P38429 201 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms