RNA–Protein interactions for RNA: YLR140W

YLR140W, Transcript of Dubious open reading frame unlikely to encode a functional protein, yeastyeast

Gene YLR140W, Length 327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR140WYLR140W FAP1P53971 965 aa10.62□□□□□ -0.71
YLR140WYLR140W MTC1P47018 478 aaKnown RBP10.48□□□□□ -0.73
YLR140WYLR140W PRY3P47033 881 aa10.02□□□□□ -0.81
YLR140WYLR140W AAD16Q02895 342 aa9.53□□□□□ -0.88
YLR140WYLR140W PRI1P10363 409 aa9.44□□□□□ -0.9
YLR140WYLR140W YCK3P39962 524 aa9.44□□□□□ -0.9
YLR140WYLR140W HAA1Q12753 694 aaKnown RBP9.37□□□□□ -0.91
YLR140WYLR140W ISW2Q08773 1120 aa8.94□□□□□ -0.98
YLR140WYLR140W DRS1P32892 752 aaKnown RBP8.91□□□□□ -0.98
YLR140WYLR140W RPG1P38249 964 aaKnown RBP8.86□□□□□ -0.99
YLR140WYLR140W TSR3Q12094 313 aaKnown RBP8.86□□□□□ -0.99
YLR140WYLR140W MRPL32P25348 183 aa8.53□□□□□ -1.04
YLR140WYLR140W YGL015CP33199 130 aa8.49□□□□□ -1.05
YLR140WYLR140W BUD31P25337 157 aaPredicted RBP8.23□□□□□ -1.09
YLR140WYLR140W RSE1Q04693 1361 aaKnown RBP8.09□□□□□ -1.12
YLR140WYLR140W DIP2Q12220 943 aaPredicted RBP8.05□□□□□ -1.12
YLR140WYLR140W REB1P21538 810 aa7.94□□□□□ -1.14
YLR140WYLR140W CDC27P38042 758 aa7.9□□□□□ -1.14
YLR140WYLR140W RPL17AP05740 184 aaKnown RBP7.87□□□□□ -1.15
YLR140WYLR140W RPL17BP46990 184 aaKnown RBP7.87□□□□□ -1.15
YLR140WYLR140W UBP10P53874 792 aaPredicted RBP7.82□□□□□ -1.16
YLR140WYLR140W MAP2P38174 421 aaKnown RBP7.78□□□□□ -1.16
YLR140WYLR140W SIS1P25294 352 aaKnown RBP7.74□□□□□ -1.17
YLR140WYLR140W YKR023WP36119 530 aaKnown RBP7.63□□□□□ -1.19
YLR140WYLR140W UBP9P39967 754 aa7.6□□□□□ -1.19
YLR140WYLR140W AVT3P36062 692 aa7.55□□□□□ -1.2
YLR140WYLR140W TIF4632P39936 914 aaKnown RBP7.52□□□□□ -1.21
YLR140WYLR140W TGL3P40308 642 aa7.52□□□□□ -1.21
YLR140WYLR140W HOP09932 586 aa7.47□□□□□ -1.21
YLR140WYLR140W SPT21P35209 758 aa7.47□□□□□ -1.21
YLR140WYLR140W TFC8Q12308 588 aa7.47□□□□□ -1.21
YLR140WYLR140W DCD1P06773 312 aa7.46□□□□□ -1.22
YLR140WYLR140W SCY1P53009 804 aa7.44□□□□□ -1.22
YLR140WYLR140W SLX5P32828 619 aaKnown RBP7.4□□□□□ -1.22
YLR140WYLR140W BCH2P36122 765 aa7.19□□□□□ -1.26
YLR140WYLR140W YBL029C-AQ3E756 94 aa7.11□□□□□ -1.27
YLR140WYLR140W MST1P07236 462 aa7.08□□□□□ -1.28
YLR140WYLR140W BFR2Q06631 534 aaKnown RBP7.07□□□□□ -1.28
YLR140WYLR140W RIM101P33400 625 aa6.99□□□□□ -1.29
YLR140WYLR140W VNX1P42839 908 aa6.99□□□□□ -1.29
YLR140WYLR140W YOR238WQ08634 303 aa6.99□□□□□ -1.29
YLR140WYLR140W BDF1P35817 686 aa6.94□□□□□ -1.3
YLR140WYLR140W EPS1P40557 701 aa6.93□□□□□ -1.3
YLR140WYLR140W SPP1Q03012 353 aa6.93□□□□□ -1.3
YLR140WYLR140W YJL171CP46992 396 aa6.9□□□□□ -1.3
YLR140WYLR140W AIR2Q12476 344 aaKnown RBP6.9□□□□□ -1.3
YLR140WYLR140W NSR1P27476 414 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
YLR140WYLR140W FKH1P40466 484 aa6.84□□□□□ -1.31
YLR140WYLR140W WSC3Q12215 556 aa6.84□□□□□ -1.31
YLR140WYLR140W YAP5P40574 245 aa6.8□□□□□ -1.32
YLR140WYLR140W TIF11P38912 153 aaKnown RBP6.79□□□□□ -1.32
YLR140WYLR140W OXP1P28273 1286 aa6.71□□□□□ -1.34
YLR140WYLR140W BMT6Q12291 365 aa6.71□□□□□ -1.34
YLR140WYLR140W LDB19Q12502 818 aa6.68□□□□□ -1.34
YLR140WYLR140W GTT3P39996 337 aa6.66□□□□□ -1.34
YLR140WYLR140W PTP3P40048 928 aa6.65□□□□□ -1.34
YLR140WYLR140W YIL055CP40523 627 aaKnown RBP6.65□□□□□ -1.34
YLR140WYLR140W ULI1P43604 169 aa6.64□□□□□ -1.35
YLR140WYLR140W BBC1P47068 1157 aa6.64□□□□□ -1.35
YLR140WYLR140W IOC2Q12072 812 aa6.64□□□□□ -1.35
YLR140WYLR140W AI2P03876 854 aa6.55□□□□□ -1.36
YLR140WYLR140W RSM7P47150 247 aa6.53□□□□□ -1.36
YLR140WYLR140W RTG1P32607 177 aa6.48□□□□□ -1.37
YLR140WYLR140W EAP1P36041 632 aaKnown RBP6.48□□□□□ -1.37
YLR140WYLR140W MSB4Q12317 492 aa6.48□□□□□ -1.37
YLR140WYLR140W PIB1Q06651 286 aa6.47□□□□□ -1.37
YLR140WYLR140W NCR1Q12200 1170 aa6.46□□□□□ -1.38
YLR140WYLR140W YAH1Q12184 172 aaKnown RBP6.43□□□□□ -1.38
YLR140WYLR140W TRP5P00931 707 aaKnown RBP6.4□□□□□ -1.38
YLR140WYLR140W SEC61P32915 480 aa6.39□□□□□ -1.39
YLR140WYLR140W YNL035CP53962 389 aaKnown RBP6.39□□□□□ -1.39
YLR140WYLR140W SET4P42948 560 aa6.37□□□□□ -1.39
YLR140WYLR140W YOL036WQ08206 761 aa6.37□□□□□ -1.39
YLR140WYLR140W BCK2P33306 851 aa6.36□□□□□ -1.39
YLR140WYLR140W TFG1P41895 735 aaPredicted RBP6.31□□□□□ -1.4
YLR140WYLR140W CHL1P22516 861 aaPredicted RBP6.28□□□□□ -1.4
YLR140WYLR140W SAP30P38429 201 aa6.28□□□□□ -1.4
YLR140WYLR140W YLR271WQ06152 274 aa6.28□□□□□ -1.4
YLR140WYLR140W MRM1P25270 412 aa6.25□□□□□ -1.41
YLR140WYLR140W PSD2P53037 1138 aaKnown RBP6.25□□□□□ -1.41
YLR140WYLR140W PRE3P38624 215 aa6.22□□□□□ -1.41
YLR140WYLR140W DAN4P47179 1161 aa6.22□□□□□ -1.41
YLR140WYLR140W RGA2Q06407 1009 aa6.21□□□□□ -1.42
YLR140WYLR140W YDL129WQ07555 291 aa6.21□□□□□ -1.42
YLR140WYLR140W VMA1P17255 1071 aaKnown RBP6.2□□□□□ -1.42
YLR140WYLR140W YMR1P47147 688 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
YLR140WYLR140W SAM3Q08986 587 aa6.2□□□□□ -1.42
YLR140WYLR140W DBP1P24784 617 aaKnown RBP6.19□□□□□ -1.42
YLR140WYLR140W JIP4Q03361 876 aa6.19□□□□□ -1.42
YLR140WYLR140W XDJ1P39102 459 aa6.16□□□□□ -1.42
YLR140WYLR140W YFR006WP43590 535 aa6.15□□□□□ -1.42
YLR140WYLR140W VPS29P38759 282 aa6.14□□□□□ -1.43
YLR140WYLR140W VRP1P37370 817 aa6.13□□□□□ -1.43
YLR140WYLR140W ABP1P15891 592 aaKnown RBP6.1□□□□□ -1.43
YLR140WYLR140W STS1P38637 319 aa6.1□□□□□ -1.43
YLR140WYLR140W PTC4P38089 393 aa6.08□□□□□ -1.44
YLR140WYLR140W RTG3P38165 486 aa6.08□□□□□ -1.44
YLR140WYLR140W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
YLR140WYLR140W DPS1P04802 557 aaKnown RBP6.07□□□□□ -1.44
YLR140WYLR140W TFA1P36100 482 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms