RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeastyeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP6YLR085C MTC1P47018 478 aaKnown RBP19.57■□□□□ 0.72
ARP6YLR085C DRS1P32892 752 aaKnown RBP18.57■□□□□ 0.56
ARP6YLR085C SGS1P35187 1447 aa17.8■□□□□ 0.44
ARP6YLR085C FAP1P53971 965 aa17.43■□□□□ 0.38
ARP6YLR085C INO80P53115 1489 aa17.42■□□□□ 0.38
ARP6YLR085C TCB3Q03640 1545 aaKnown RBP17.25■□□□□ 0.35
ARP6YLR085C MON2P48563 1636 aaPredicted RBP17.03■□□□□ 0.32
ARP6YLR085C TY1B-DR4Q07793 1604 aa17.02■□□□□ 0.31
ARP6YLR085C SSN2P38931 1420 aa16.94■□□□□ 0.3
ARP6YLR085C SPA2P23201 1466 aaKnown RBP16.93■□□□□ 0.3
ARP6YLR085C HSL1P34244 1518 aa16.72■□□□□ 0.27
ARP6YLR085C SWR1Q05471 1514 aa16.72■□□□□ 0.27
ARP6YLR085C SPT6P23615 1451 aaKnown RBP16.7■□□□□ 0.26
ARP6YLR085C HIR3P47171 1648 aa16.43■□□□□ 0.22
ARP6YLR085C XRN1P22147 1528 aaKnown RBP16.34■□□□□ 0.21
ARP6YLR085C PRI1P10363 409 aa16.34■□□□□ 0.21
ARP6YLR085C PRY3P47033 881 aa16.3■□□□□ 0.2
ARP6YLR085C ISW2Q08773 1120 aa16.29■□□□□ 0.2
ARP6YLR085C DNA2P38859 1522 aa16.28■□□□□ 0.2
ARP6YLR085C AAD16Q02895 342 aa16.27■□□□□ 0.2
ARP6YLR085C KOG1P38873 1557 aa16.2■□□□□ 0.18
ARP6YLR085C DIP2Q12220 943 aaPredicted RBP16.19■□□□□ 0.18
ARP6YLR085C REV3P14284 1504 aa16.09■□□□□ 0.17
ARP6YLR085C RPG1P38249 964 aaKnown RBP16■□□□□ 0.15
ARP6YLR085C TAF2P23255 1407 aa15.98■□□□□ 0.15
ARP6YLR085C THO2P53552 1597 aaKnown RBP15.94■□□□□ 0.14
ARP6YLR085C SIN3P22579 1536 aa15.91■□□□□ 0.14
ARP6YLR085C BUD4P47136 1447 aa15.89■□□□□ 0.13
ARP6YLR085C ECM5Q03214 1411 aa15.88■□□□□ 0.13
ARP6YLR085C SSK2P53599 1579 aa15.85■□□□□ 0.13
ARP6YLR085C ESP1Q03018 1630 aa15.74■□□□□ 0.11
ARP6YLR085C SKI3P17883 1432 aaKnown RBP15.72■□□□□ 0.11
ARP6YLR085C ATG2P53855 1592 aa15.7■□□□□ 0.1
ARP6YLR085C MYO2P19524 1574 aaKnown RBP15.67■□□□□ 0.1
ARP6YLR085C MDS3P53094 1487 aa15.62■□□□□ 0.09
ARP6YLR085C RSE1Q04693 1361 aaKnown RBP15.61■□□□□ 0.09
ARP6YLR085C AVT3P36062 692 aa15.59■□□□□ 0.09
ARP6YLR085C BFR2Q06631 534 aaKnown RBP15.59■□□□□ 0.09
ARP6YLR085C PEP1P32319 1579 aa15.55■□□□□ 0.08
ARP6YLR085C YPK9Q12697 1472 aa15.48■□□□□ 0.07
ARP6YLR085C TSR3Q12094 313 aaKnown RBP15.44■□□□□ 0.06
ARP6YLR085C POL1P13382 1468 aa15.39■□□□□ 0.05
ARP6YLR085C STU1P38198 1513 aa15.37■□□□□ 0.05
ARP6YLR085C SCC2Q04002 1493 aa15.37■□□□□ 0.05
ARP6YLR085C HAA1Q12753 694 aaKnown RBP15.37■□□□□ 0.05
ARP6YLR085C UFD4P33202 1483 aa15.3■□□□□ 0.04
ARP6YLR085C RKR1Q04781 1562 aa15.29■□□□□ 0.04
ARP6YLR085C RPO31P04051 1460 aa15.27■□□□□ 0.04
ARP6YLR085C YTA7P40340 1379 aa15.21■□□□□ 0.03
ARP6YLR085C YOR1P53049 1477 aa15.19■□□□□ 0.02
ARP6YLR085C BPT1P14772 1559 aa15.18■□□□□ 0.02
ARP6YLR085C TOP2P06786 1428 aaKnown RBP15.18■□□□□ 0.02
ARP6YLR085C MMS22Q06164 1454 aa15.17■□□□□ 0.02
ARP6YLR085C YCF1P39109 1515 aaKnown RBP15.16■□□□□ 0.02
ARP6YLR085C CHD1P32657 1468 aa15.16■□□□□ 0.02
ARP6YLR085C YCK3P39962 524 aa15.12■□□□□ 0.01
ARP6YLR085C SAS10Q12136 610 aaPredicted RBP15.12■□□□□ 0.01
ARP6YLR085C TY2B-LR1P0C2J3 1770 aa15.11■□□□□ 0.01
ARP6YLR085C TY2B-FP0CX63 1770 aa15.11■□□□□ 0.01
ARP6YLR085C TY2B-GR2P0CX64 1770 aa15.11■□□□□ 0.01
ARP6YLR085C TY2B-CP25384 1770 aa15.11■□□□□ 0.01
ARP6YLR085C TY2B-DR2Q03494 1770 aa15.11■□□□□ 0.01
ARP6YLR085C TY1B-DR1Q03855 1755 aa15.11■□□□□ 0.01
ARP6YLR085C TY2B-DR3Q07791 1770 aaKnown RBP15.11■□□□□ 0.01
ARP6YLR085C TY2B-OR1Q12113 1770 aa15.11■□□□□ 0.01
ARP6YLR085C TY2B-DR1Q12472 1770 aa15.11■□□□□ 0.01
ARP6YLR085C TY2B-OR2Q12501 1770 aa15.11■□□□□ 0.01
ARP6YLR085C RQC2Q12532 1038 aaKnown RBP15.1■□□□□ 0.01
ARP6YLR085C SMC4Q12267 1418 aa15.09■□□□□ 0.01
ARP6YLR085C REB1P21538 810 aa15.06■□□□□ 0
ARP6YLR085C RPL17AP05740 184 aaKnown RBP15.05■□□□□ -0
ARP6YLR085C RPL17BP46990 184 aaKnown RBP15.05■□□□□ -0
ARP6YLR085C MYO4P32492 1471 aa15.03■□□□□ -0
ARP6YLR085C TY1B-DR3Q99231 1755 aa15.03■□□□□ -0
ARP6YLR085C MRPL32P25348 183 aa14.97□□□□□ -0.01
ARP6YLR085C TY2B-BQ12491 1770 aa14.97□□□□□ -0.01
ARP6YLR085C TY1B-BRQ12193 1756 aa14.9□□□□□ -0.02
ARP6YLR085C TY1B-GR3Q12316 1755 aa14.9□□□□□ -0.02
ARP6YLR085C TY1B-ORQ92393 1755 aa14.9□□□□□ -0.02
ARP6YLR085C CDC25P04821 1589 aa14.88□□□□□ -0.03
ARP6YLR085C SPP41P38904 1435 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-HO13535 1793 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-DR5P0C2I2 1755 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-DR6P0C2I3 1755 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-LR2P0C2I5 1755 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-LR3P0C2I6 1755 aaKnown RBP14.87□□□□□ -0.03
ARP6YLR085C TY1B-PR1P0C2I9 1755 aaKnown RBP14.87□□□□□ -0.03
ARP6YLR085C TY1B-PR2P0C2J0 1756 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-PR3P0C2J1 1755 aaKnown RBP14.87□□□□□ -0.03
ARP6YLR085C TY1B-JR1P47098 1755 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-ML2Q03434 1755 aaKnown RBP14.87□□□□□ -0.03
ARP6YLR085C TY1B-ER1Q03612 1755 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-ML1Q04711 1755 aaKnown RBP14.87□□□□□ -0.03
ARP6YLR085C TY1B-GR2Q12269 1755 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-OLQ12273 1755 aa14.87□□□□□ -0.03
ARP6YLR085C TY1B-PLQ12414 1755 aaKnown RBP14.87□□□□□ -0.03
ARP6YLR085C STH1P32597 1359 aa14.87□□□□□ -0.03
ARP6YLR085C SNQ2P32568 1501 aaKnown RBP14.85□□□□□ -0.03
ARP6YLR085C TAF7Q05021 590 aa14.85□□□□□ -0.03
ARP6YLR085C PAN1P32521 1480 aa14.8□□□□□ -0.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms