RNA–Protein interactions for RNA: YLR014C

PPR1, Transcript of Zinc finger transcription factor, yeastyeast

Gene PPR1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPR1YLR014C DRS1P32892 752 aaKnown RBP10.13□□□□□ -0.79
PPR1YLR014C SGS1P35187 1447 aa9.93□□□□□ -0.82
PPR1YLR014C INO80P53115 1489 aa9.85□□□□□ -0.83
PPR1YLR014C MON2P48563 1636 aaPredicted RBP9.82□□□□□ -0.84
PPR1YLR014C RQC2Q12532 1038 aaKnown RBP9.81□□□□□ -0.84
PPR1YLR014C TCB3Q03640 1545 aaKnown RBP9.77□□□□□ -0.85
PPR1YLR014C TY1B-DR4Q07793 1604 aa9.76□□□□□ -0.85
PPR1YLR014C TFA1P36100 482 aa9.69□□□□□ -0.86
PPR1YLR014C TAF7Q05021 590 aa9.61□□□□□ -0.87
PPR1YLR014C SWR1Q05471 1514 aa9.54□□□□□ -0.88
PPR1YLR014C HSL1P34244 1518 aa9.49□□□□□ -0.89
PPR1YLR014C SPA2P23201 1466 aaKnown RBP9.48□□□□□ -0.89
PPR1YLR014C SSN2P38931 1420 aa9.45□□□□□ -0.9
PPR1YLR014C SPT6P23615 1451 aaKnown RBP9.42□□□□□ -0.9
PPR1YLR014C BFR2Q06631 534 aaKnown RBP9.4□□□□□ -0.9
PPR1YLR014C HIR3P47171 1648 aa9.31□□□□□ -0.92
PPR1YLR014C DNA2P38859 1522 aa9.27□□□□□ -0.93
PPR1YLR014C KOG1P38873 1557 aa9.23□□□□□ -0.93
PPR1YLR014C XRN1P22147 1528 aaKnown RBP9.16□□□□□ -0.94
PPR1YLR014C REV3P14284 1504 aa9.08□□□□□ -0.96
PPR1YLR014C THO2P53552 1597 aaKnown RBP9.06□□□□□ -0.96
PPR1YLR014C SIN3P22579 1536 aa9.06□□□□□ -0.96
PPR1YLR014C SSK2P53599 1579 aa8.98□□□□□ -0.97
PPR1YLR014C BUD4P47136 1447 aa8.98□□□□□ -0.97
PPR1YLR014C ATG2P53855 1592 aa8.95□□□□□ -0.98
PPR1YLR014C ECM5Q03214 1411 aa8.93□□□□□ -0.98
PPR1YLR014C ESP1Q03018 1630 aa8.91□□□□□ -0.98
PPR1YLR014C PEP1P32319 1579 aa8.9□□□□□ -0.98
PPR1YLR014C MDS3P53094 1487 aa8.87□□□□□ -0.99
PPR1YLR014C TAF2P23255 1407 aa8.83□□□□□ -1
PPR1YLR014C MYO2P19524 1574 aaKnown RBP8.83□□□□□ -1
PPR1YLR014C YPK9Q12697 1472 aa8.74□□□□□ -1.01
PPR1YLR014C SKI3P17883 1432 aaKnown RBP8.73□□□□□ -1.01
PPR1YLR014C SCC2Q04002 1493 aa8.69□□□□□ -1.02
PPR1YLR014C POL1P13382 1468 aa8.65□□□□□ -1.02
PPR1YLR014C RPO31P04051 1460 aa8.63□□□□□ -1.03
PPR1YLR014C TY2B-LR1P0C2J3 1770 aa8.63□□□□□ -1.03
PPR1YLR014C TY2B-FP0CX63 1770 aa8.63□□□□□ -1.03
PPR1YLR014C TY2B-GR2P0CX64 1770 aa8.63□□□□□ -1.03
PPR1YLR014C TY2B-CP25384 1770 aa8.63□□□□□ -1.03
PPR1YLR014C TY2B-DR2Q03494 1770 aa8.63□□□□□ -1.03
PPR1YLR014C TY1B-DR1Q03855 1755 aa8.63□□□□□ -1.03
PPR1YLR014C TY2B-DR3Q07791 1770 aaKnown RBP8.63□□□□□ -1.03
PPR1YLR014C TY2B-OR1Q12113 1770 aa8.63□□□□□ -1.03
PPR1YLR014C TY2B-DR1Q12472 1770 aa8.63□□□□□ -1.03
PPR1YLR014C TY2B-OR2Q12501 1770 aa8.63□□□□□ -1.03
PPR1YLR014C MTC1P47018 478 aaKnown RBP8.61□□□□□ -1.03
PPR1YLR014C DMA1P38823 416 aa8.6□□□□□ -1.03
PPR1YLR014C RKR1Q04781 1562 aa8.58□□□□□ -1.04
PPR1YLR014C YCF1P39109 1515 aaKnown RBP8.58□□□□□ -1.04
PPR1YLR014C UFD4P33202 1483 aa8.58□□□□□ -1.04
PPR1YLR014C BPT1P14772 1559 aa8.58□□□□□ -1.04
PPR1YLR014C TY1B-DR3Q99231 1755 aa8.57□□□□□ -1.04
PPR1YLR014C STU1P38198 1513 aa8.56□□□□□ -1.04
PPR1YLR014C TY2B-BQ12491 1770 aa8.55□□□□□ -1.04
PPR1YLR014C LEO1P38439 464 aa8.54□□□□□ -1.04
PPR1YLR014C YOR1P53049 1477 aa8.53□□□□□ -1.04
PPR1YLR014C TOP2P06786 1428 aaKnown RBP8.53□□□□□ -1.04
PPR1YLR014C TY1B-BRQ12193 1756 aa8.52□□□□□ -1.05
PPR1YLR014C TY1B-GR3Q12316 1755 aa8.52□□□□□ -1.05
PPR1YLR014C TY1B-ORQ92393 1755 aa8.52□□□□□ -1.05
PPR1YLR014C TY1B-HO13535 1793 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-DR5P0C2I2 1755 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-DR6P0C2I3 1755 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-LR2P0C2I5 1755 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-LR3P0C2I6 1755 aaKnown RBP8.5□□□□□ -1.05
PPR1YLR014C TY1B-PR1P0C2I9 1755 aaKnown RBP8.5□□□□□ -1.05
PPR1YLR014C TY1B-PR2P0C2J0 1756 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-PR3P0C2J1 1755 aaKnown RBP8.5□□□□□ -1.05
PPR1YLR014C TY1B-JR1P47098 1755 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-ML2Q03434 1755 aaKnown RBP8.5□□□□□ -1.05
PPR1YLR014C TY1B-ER1Q03612 1755 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-ML1Q04711 1755 aaKnown RBP8.5□□□□□ -1.05
PPR1YLR014C TY1B-GR2Q12269 1755 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-OLQ12273 1755 aa8.5□□□□□ -1.05
PPR1YLR014C TY1B-PLQ12414 1755 aaKnown RBP8.5□□□□□ -1.05
PPR1YLR014C RSE1Q04693 1361 aaKnown RBP8.5□□□□□ -1.05
PPR1YLR014C CHD1P32657 1468 aa8.49□□□□□ -1.05
PPR1YLR014C SMC4Q12267 1418 aa8.47□□□□□ -1.05
PPR1YLR014C CDC25P04821 1589 aa8.44□□□□□ -1.06
PPR1YLR014C MYO4P32492 1471 aa8.43□□□□□ -1.06
PPR1YLR014C YTA7P40340 1379 aa8.42□□□□□ -1.06
PPR1YLR014C MMS22Q06164 1454 aa8.41□□□□□ -1.06
PPR1YLR014C ESC1Q03661 1658 aaKnown RBP8.37□□□□□ -1.07
PPR1YLR014C TY1B-JR2P47100 1755 aaKnown RBP8.35□□□□□ -1.07
PPR1YLR014C TY1B-ER2Q03619 1755 aa8.35□□□□□ -1.07
PPR1YLR014C TY1B-MR1Q04214 1755 aa8.35□□□□□ -1.07
PPR1YLR014C TY1B-MR2Q04670 1755 aaKnown RBP8.35□□□□□ -1.07
PPR1YLR014C TY1B-LR1Q12088 1755 aaKnown RBP8.35□□□□□ -1.07
PPR1YLR014C TY1B-NL1Q12112 1755 aa8.35□□□□□ -1.07
PPR1YLR014C TY1B-GR1Q12141 1755 aa8.35□□□□□ -1.07
PPR1YLR014C TY1B-BLQ12490 1755 aa8.35□□□□□ -1.07
PPR1YLR014C PAN1P32521 1480 aa8.34□□□□□ -1.07
PPR1YLR014C RPA190P10964 1664 aaKnown RBP8.34□□□□□ -1.07
PPR1YLR014C SPP41P38904 1435 aa8.32□□□□□ -1.08
PPR1YLR014C DNF1P32660 1571 aa8.32□□□□□ -1.08
PPR1YLR014C AVT3P36062 692 aa8.31□□□□□ -1.08
PPR1YLR014C VTH1P40438 1549 aa8.3□□□□□ -1.08
PPR1YLR014C VTH2P40890 1549 aa8.3□□□□□ -1.08
PPR1YLR014C SNQ2P32568 1501 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 66.6 ms