RNA–Protein interactions for RNA: YKR060W

UTP30, Transcript of Putative subunit of U3-containing 90S preribosome complex, yeastyeast

Gene UTP30, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP30YKR060W FAP1P53971 965 aa15.94■□□□□ 0.14
UTP30YKR060W MTC1P47018 478 aaKnown RBP15.68■□□□□ 0.1
UTP30YKR060W PRY3P47033 881 aa15.06■□□□□ 0
UTP30YKR060W YCK3P39962 524 aa14.27□□□□□ -0.13
UTP30YKR060W AAD16Q02895 342 aa14.27□□□□□ -0.13
UTP30YKR060W PRI1P10363 409 aa14.15□□□□□ -0.14
UTP30YKR060W HAA1Q12753 694 aaKnown RBP14.01□□□□□ -0.17
UTP30YKR060W TSR3Q12094 313 aaKnown RBP13.32□□□□□ -0.28
UTP30YKR060W ISW2Q08773 1120 aa13.31□□□□□ -0.28
UTP30YKR060W RPG1P38249 964 aaKnown RBP13.29□□□□□ -0.28
UTP30YKR060W DRS1P32892 752 aaKnown RBP13.03□□□□□ -0.32
UTP30YKR060W MRPL32P25348 183 aa12.74□□□□□ -0.37
UTP30YKR060W YGL015CP33199 130 aa12.67□□□□□ -0.38
UTP30YKR060W BUD31P25337 157 aaPredicted RBP12.42□□□□□ -0.42
UTP30YKR060W RSE1Q04693 1361 aaKnown RBP12.05□□□□□ -0.48
UTP30YKR060W DIP2Q12220 943 aaPredicted RBP12.03□□□□□ -0.48
UTP30YKR060W CDC27P38042 758 aa11.89□□□□□ -0.51
UTP30YKR060W REB1P21538 810 aa11.86□□□□□ -0.51
UTP30YKR060W RPL17AP05740 184 aaKnown RBP11.8□□□□□ -0.52
UTP30YKR060W RPL17BP46990 184 aaKnown RBP11.8□□□□□ -0.52
UTP30YKR060W MAP2P38174 421 aaKnown RBP11.68□□□□□ -0.54
UTP30YKR060W UBP10P53874 792 aaPredicted RBP11.67□□□□□ -0.54
UTP30YKR060W SIS1P25294 352 aaKnown RBP11.58□□□□□ -0.56
UTP30YKR060W YKR023WP36119 530 aaKnown RBP11.46□□□□□ -0.57
UTP30YKR060W UBP9P39967 754 aa11.31□□□□□ -0.6
UTP30YKR060W DCD1P06773 312 aa11.24□□□□□ -0.61
UTP30YKR060W HOP09932 586 aa11.23□□□□□ -0.61
UTP30YKR060W TGL3P40308 642 aa11.2□□□□□ -0.62
UTP30YKR060W TFC8Q12308 588 aa11.2□□□□□ -0.62
UTP30YKR060W SPT21P35209 758 aa11.18□□□□□ -0.62
UTP30YKR060W TIF4632P39936 914 aaKnown RBP11.18□□□□□ -0.62
UTP30YKR060W AVT3P36062 692 aa11.14□□□□□ -0.63
UTP30YKR060W SCY1P53009 804 aa11.14□□□□□ -0.63
UTP30YKR060W SLX5P32828 619 aaKnown RBP11.06□□□□□ -0.64
UTP30YKR060W BCH2P36122 765 aa10.79□□□□□ -0.68
UTP30YKR060W YBL029C-AQ3E756 94 aa10.66□□□□□ -0.7
UTP30YKR060W MST1P07236 462 aa10.57□□□□□ -0.72
UTP30YKR060W VNX1P42839 908 aa10.47□□□□□ -0.73
UTP30YKR060W RIM101P33400 625 aa10.44□□□□□ -0.74
UTP30YKR060W YOR238WQ08634 303 aa10.42□□□□□ -0.74
UTP30YKR060W BDF1P35817 686 aa10.39□□□□□ -0.75
UTP30YKR060W EPS1P40557 701 aa10.37□□□□□ -0.75
UTP30YKR060W SPP1Q03012 353 aa10.34□□□□□ -0.75
UTP30YKR060W AIR2Q12476 344 aaKnown RBP10.33□□□□□ -0.76
UTP30YKR060W YJL171CP46992 396 aa10.27□□□□□ -0.77
UTP30YKR060W WSC3Q12215 556 aa10.24□□□□□ -0.77
UTP30YKR060W FKH1P40466 484 aa10.22□□□□□ -0.77
UTP30YKR060W NSR1P27476 414 aaKnown RBP RIP-Chip data10.19□□□□□ -0.78not detected
UTP30YKR060W TIF11P38912 153 aaKnown RBP10.12□□□□□ -0.79
UTP30YKR060W YAP5P40574 245 aa10.11□□□□□ -0.79
UTP30YKR060W OXP1P28273 1286 aa10.08□□□□□ -0.8
UTP30YKR060W BFR2Q06631 534 aaKnown RBP10.04□□□□□ -0.8
UTP30YKR060W BMT6Q12291 365 aa10□□□□□ -0.81
UTP30YKR060W LDB19Q12502 818 aa9.99□□□□□ -0.81
UTP30YKR060W IOC2Q12072 812 aa9.94□□□□□ -0.82
UTP30YKR060W GTT3P39996 337 aa9.92□□□□□ -0.82
UTP30YKR060W ULI1P43604 169 aa9.92□□□□□ -0.82
UTP30YKR060W PTP3P40048 928 aa9.91□□□□□ -0.82
UTP30YKR060W YIL055CP40523 627 aaKnown RBP9.85□□□□□ -0.83
UTP30YKR060W BBC1P47068 1157 aa9.85□□□□□ -0.83
UTP30YKR060W AI2P03876 854 aa9.78□□□□□ -0.84
UTP30YKR060W RSM7P47150 247 aa9.74□□□□□ -0.85
UTP30YKR060W PIB1Q06651 286 aa9.73□□□□□ -0.85
UTP30YKR060W RTG1P32607 177 aa9.67□□□□□ -0.86
UTP30YKR060W NCR1Q12200 1170 aa9.64□□□□□ -0.87
UTP30YKR060W MSB4Q12317 492 aa9.61□□□□□ -0.87
UTP30YKR060W EAP1P36041 632 aaKnown RBP9.6□□□□□ -0.87
UTP30YKR060W TRP5P00931 707 aaKnown RBP9.57□□□□□ -0.88
UTP30YKR060W SET4P42948 560 aa9.53□□□□□ -0.88
UTP30YKR060W YOL036WQ08206 761 aa9.51□□□□□ -0.89
UTP30YKR060W YAH1Q12184 172 aaKnown RBP9.51□□□□□ -0.89
UTP30YKR060W YNL035CP53962 389 aaKnown RBP9.5□□□□□ -0.89
UTP30YKR060W SEC61P32915 480 aa9.49□□□□□ -0.89
UTP30YKR060W BCK2P33306 851 aa9.47□□□□□ -0.89
UTP30YKR060W RGA2Q06407 1009 aa9.45□□□□□ -0.9
UTP30YKR060W SAP30P38429 201 aa9.38□□□□□ -0.91
UTP30YKR060W MRM1P25270 412 aa9.35□□□□□ -0.91
UTP30YKR060W TFG1P41895 735 aaPredicted RBP9.34□□□□□ -0.91
UTP30YKR060W PSD2P53037 1138 aaKnown RBP9.34□□□□□ -0.91
UTP30YKR060W CHL1P22516 861 aaPredicted RBP9.33□□□□□ -0.92
UTP30YKR060W YLR271WQ06152 274 aa9.31□□□□□ -0.92
UTP30YKR060W DAN4P47179 1161 aa9.29□□□□□ -0.92
UTP30YKR060W DBP1P24784 617 aaKnown RBP9.26□□□□□ -0.93
UTP30YKR060W PRE3P38624 215 aa9.26□□□□□ -0.93
UTP30YKR060W VMA1P17255 1071 aaKnown RBP9.24□□□□□ -0.93
UTP30YKR060W YDL129WQ07555 291 aa9.24□□□□□ -0.93
UTP30YKR060W SAM3Q08986 587 aa9.24□□□□□ -0.93
UTP30YKR060W YFR006WP43590 535 aa9.23□□□□□ -0.93
UTP30YKR060W YMR1P47147 688 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
UTP30YKR060W VPS29P38759 282 aa9.2□□□□□ -0.94
UTP30YKR060W JIP4Q03361 876 aa9.18□□□□□ -0.94
UTP30YKR060W XDJ1P39102 459 aa9.17□□□□□ -0.94
UTP30YKR060W STS1P38637 319 aa9.15□□□□□ -0.94
UTP30YKR060W VRP1P37370 817 aa9.14□□□□□ -0.95
UTP30YKR060W RGA1P39083 1007 aa9.07□□□□□ -0.96
UTP30YKR060W YDR344CQ05510 147 aa9.07□□□□□ -0.96
UTP30YKR060W DPS1P04802 557 aaKnown RBP9.04□□□□□ -0.96
UTP30YKR060W PTC4P38089 393 aa9.04□□□□□ -0.96
UTP30YKR060W GYP5Q12344 894 aa9.03□□□□□ -0.96
UTP30YKR060W RTG3P38165 486 aa9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms