RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C MTC1P47018 478 aaKnown RBP13.21□□□□□ -0.29
YPT52YKR014C DRS1P32892 752 aaKnown RBP12.72□□□□□ -0.37
YPT52YKR014C FAP1P53971 965 aa12.39□□□□□ -0.43
YPT52YKR014C PRY3P47033 881 aa11.65□□□□□ -0.54
YPT52YKR014C PRI1P10363 409 aa11.37□□□□□ -0.59
YPT52YKR014C AAD16Q02895 342 aa11.36□□□□□ -0.59
YPT52YKR014C ISW2Q08773 1120 aa11.04□□□□□ -0.64
YPT52YKR014C RPG1P38249 964 aaKnown RBP10.97□□□□□ -0.65
YPT52YKR014C YCK3P39962 524 aa10.97□□□□□ -0.65
YPT52YKR014C DIP2Q12220 943 aaPredicted RBP10.95□□□□□ -0.66
YPT52YKR014C HAA1Q12753 694 aaKnown RBP10.88□□□□□ -0.67
YPT52YKR014C BFR2Q06631 534 aaKnown RBP10.85□□□□□ -0.67
YPT52YKR014C TSR3Q12094 313 aaKnown RBP10.76□□□□□ -0.69
YPT52YKR014C AVT3P36062 692 aa10.64□□□□□ -0.71
YPT52YKR014C RSE1Q04693 1361 aaKnown RBP10.46□□□□□ -0.74
YPT52YKR014C MRPL32P25348 183 aa10.33□□□□□ -0.76
YPT52YKR014C RPL17AP05740 184 aaKnown RBP10.1□□□□□ -0.79
YPT52YKR014C RPL17BP46990 184 aaKnown RBP10.1□□□□□ -0.79
YPT52YKR014C REB1P21538 810 aa10.08□□□□□ -0.8
YPT52YKR014C YGL015CP33199 130 aa10□□□□□ -0.81
YPT52YKR014C TFA1P36100 482 aa9.91□□□□□ -0.82
YPT52YKR014C CDC27P38042 758 aa9.74□□□□□ -0.85
YPT52YKR014C YKR023WP36119 530 aaKnown RBP9.61□□□□□ -0.87
YPT52YKR014C SPT21P35209 758 aa9.59□□□□□ -0.87
YPT52YKR014C MAP2P38174 421 aaKnown RBP9.48□□□□□ -0.89
YPT52YKR014C UBP10P53874 792 aaPredicted RBP9.46□□□□□ -0.9
YPT52YKR014C HOP09932 586 aa9.44□□□□□ -0.9
YPT52YKR014C DCD1P06773 312 aa9.42□□□□□ -0.9
YPT52YKR014C RIM101P33400 625 aa9.41□□□□□ -0.9
YPT52YKR014C TFC8Q12308 588 aa9.41□□□□□ -0.9
YPT52YKR014C BUD31P25337 157 aaPredicted RBP9.32□□□□□ -0.92
YPT52YKR014C SCY1P53009 804 aa9.22□□□□□ -0.93
YPT52YKR014C SLX5P32828 619 aaKnown RBP9.11□□□□□ -0.95
YPT52YKR014C TIF4632P39936 914 aaKnown RBP9.11□□□□□ -0.95
YPT52YKR014C BCH2P36122 765 aa9.1□□□□□ -0.95
YPT52YKR014C YIL055CP40523 627 aaKnown RBP9.1□□□□□ -0.95
YPT52YKR014C OXP1P28273 1286 aa9.08□□□□□ -0.96
YPT52YKR014C TGL3P40308 642 aa9.08□□□□□ -0.96
YPT52YKR014C PTP3P40048 928 aa9.04□□□□□ -0.96
YPT52YKR014C YAH1Q12184 172 aaKnown RBP8.97□□□□□ -0.97
YPT52YKR014C UBP9P39967 754 aa8.92□□□□□ -0.98
YPT52YKR014C RSM7P47150 247 aa8.9□□□□□ -0.98
YPT52YKR014C SIS1P25294 352 aaKnown RBP8.87□□□□□ -0.99
YPT52YKR014C SSP1P38871 571 aa8.87□□□□□ -0.99
YPT52YKR014C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
YPT52YKR014C EPS1P40557 701 aa8.83□□□□□ -1
YPT52YKR014C BDF1P35817 686 aa8.81□□□□□ -1
YPT52YKR014C BBC1P47068 1157 aa8.8□□□□□ -1
YPT52YKR014C YLR271WQ06152 274 aa8.79□□□□□ -1
YPT52YKR014C AI2P03876 854 aa8.76□□□□□ -1.01
YPT52YKR014C MST1P07236 462 aa8.63□□□□□ -1.03
YPT52YKR014C MGA2P40578 1113 aa8.62□□□□□ -1.03
YPT52YKR014C YOR238WQ08634 303 aa8.61□□□□□ -1.03
YPT52YKR014C PSD2P53037 1138 aaKnown RBP8.59□□□□□ -1.03
YPT52YKR014C YBL029C-AQ3E756 94 aa8.58□□□□□ -1.04
YPT52YKR014C NSR1P27476 414 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05 RIP-Chip
YPT52YKR014C CST9Q06032 482 aa8.49□□□□□ -1.05
YPT52YKR014C YAP5P40574 245 aa8.48□□□□□ -1.05
YPT52YKR014C MRM1P25270 412 aa8.47□□□□□ -1.05
YPT52YKR014C VNX1P42839 908 aa8.47□□□□□ -1.05
YPT52YKR014C WSC3Q12215 556 aa8.42□□□□□ -1.06
YPT52YKR014C SPP1Q03012 353 aa8.4□□□□□ -1.06
YPT52YKR014C RTG3P38165 486 aa8.37□□□□□ -1.07
YPT52YKR014C GTT3P39996 337 aa8.32□□□□□ -1.08
YPT52YKR014C TIF11P38912 153 aaKnown RBP8.28□□□□□ -1.08
YPT52YKR014C PIB1Q06651 286 aa8.28□□□□□ -1.08
YPT52YKR014C YMR1P47147 688 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
YPT52YKR014C AIR2Q12476 344 aaKnown RBP8.23□□□□□ -1.09
YPT52YKR014C RCR1P38212 213 aa8.22□□□□□ -1.09
YPT52YKR014C VPS29P38759 282 aa8.22□□□□□ -1.09
YPT52YKR014C YJL171CP46992 396 aa8.2□□□□□ -1.1
YPT52YKR014C DBP1P24784 617 aaKnown RBP8.19□□□□□ -1.1
YPT52YKR014C FKH1P40466 484 aa8.19□□□□□ -1.1
YPT52YKR014C ULI1P43604 169 aa8.18□□□□□ -1.1
YPT52YKR014C RQC2Q12532 1038 aaKnown RBP8.18□□□□□ -1.1
YPT52YKR014C LDB19Q12502 818 aa8.16□□□□□ -1.1
YPT52YKR014C IOC2Q12072 812 aa8.15□□□□□ -1.1
YPT52YKR014C YFR006WP43590 535 aa8.14□□□□□ -1.11
YPT52YKR014C RAM2P29703 316 aa8.13□□□□□ -1.11
YPT52YKR014C STS1P38637 319 aa8.12□□□□□ -1.11
YPT52YKR014C MAK11P20484 414 aaKnown RBP8.11□□□□□ -1.11
YPT52YKR014C MSB4Q12317 492 aa8.06□□□□□ -1.12
YPT52YKR014C SET4P42948 560 aa8.05□□□□□ -1.12
YPT52YKR014C BMT6Q12291 365 aa8.05□□□□□ -1.12
YPT52YKR014C VMA1P17255 1071 aaKnown RBP8.04□□□□□ -1.12
YPT52YKR014C EAP1P36041 632 aaKnown RBP8.04□□□□□ -1.12
YPT52YKR014C DMA1P38823 416 aa8.04□□□□□ -1.12
YPT52YKR014C YOL036WQ08206 761 aa8.04□□□□□ -1.12
YPT52YKR014C MIF2P35201 549 aa8.03□□□□□ -1.12
YPT52YKR014C TRP5P00931 707 aaKnown RBP8.01□□□□□ -1.13
YPT52YKR014C RTG1P32607 177 aa8□□□□□ -1.13
YPT52YKR014C COQ8P27697 501 aa7.98□□□□□ -1.13
YPT52YKR014C SAM3Q08986 587 aa7.97□□□□□ -1.13
YPT52YKR014C NCR1Q12200 1170 aa7.97□□□□□ -1.13
YPT52YKR014C SET1P38827 1080 aaKnown RBP7.95□□□□□ -1.14
YPT52YKR014C NOP53Q12080 455 aaKnown RBP7.94□□□□□ -1.14
YPT52YKR014C GYP5Q12344 894 aa7.93□□□□□ -1.14
YPT52YKR014C ABP1P15891 592 aaKnown RBP7.92□□□□□ -1.14
YPT52YKR014C YNL035CP53962 389 aaKnown RBP7.92□□□□□ -1.14
YPT52YKR014C GRE2Q12068 342 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms