RNA–Protein interactions for RNA: YKL059C

MPE1, Transcript of Essential conserved subunit of CPF cleavage and polyadenylation factor, yeastyeast

Gene MPE1, Length 1,326 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MPE1YKL059C DRS1P32892 752 aaKnown RBP13.58□□□□□ -0.24
MPE1YKL059C MTC1P47018 478 aaKnown RBP13.56□□□□□ -0.24
MPE1YKL059C MON2P48563 1636 aaPredicted RBP13.11□□□□□ -0.31
MPE1YKL059C SGS1P35187 1447 aa13.06□□□□□ -0.32
MPE1YKL059C INO80P53115 1489 aa13.04□□□□□ -0.32
MPE1YKL059C TCB3Q03640 1545 aaKnown RBP12.98□□□□□ -0.33
MPE1YKL059C TY1B-DR4Q07793 1604 aa12.84□□□□□ -0.35
MPE1YKL059C SWR1Q05471 1514 aa12.67□□□□□ -0.38
MPE1YKL059C HSL1P34244 1518 aa12.49□□□□□ -0.41
MPE1YKL059C SPT6P23615 1451 aaKnown RBP12.47□□□□□ -0.41
MPE1YKL059C KOG1P38873 1557 aa12.43□□□□□ -0.42
MPE1YKL059C DNA2P38859 1522 aa12.42□□□□□ -0.42
MPE1YKL059C SPA2P23201 1466 aaKnown RBP12.4□□□□□ -0.42
MPE1YKL059C SSN2P38931 1420 aa12.29□□□□□ -0.44
MPE1YKL059C HIR3P47171 1648 aa12.25□□□□□ -0.45
MPE1YKL059C XRN1P22147 1528 aaKnown RBP12.08□□□□□ -0.48
MPE1YKL059C THO2P53552 1597 aaKnown RBP12.04□□□□□ -0.48
MPE1YKL059C BUD4P47136 1447 aa11.98□□□□□ -0.49
MPE1YKL059C ECM5Q03214 1411 aa11.92□□□□□ -0.5
MPE1YKL059C REV3P14284 1504 aa11.92□□□□□ -0.5
MPE1YKL059C SIN3P22579 1536 aa11.87□□□□□ -0.51
MPE1YKL059C MDS3P53094 1487 aa11.79□□□□□ -0.52
MPE1YKL059C ATG2P53855 1592 aa11.77□□□□□ -0.53
MPE1YKL059C SSK2P53599 1579 aa11.75□□□□□ -0.53
MPE1YKL059C PEP1P32319 1579 aa11.72□□□□□ -0.53
MPE1YKL059C BFR2Q06631 534 aaKnown RBP11.72□□□□□ -0.53
MPE1YKL059C RSE1Q04693 1361 aaKnown RBP11.7□□□□□ -0.54
MPE1YKL059C ESP1Q03018 1630 aa11.7□□□□□ -0.54
MPE1YKL059C TAF2P23255 1407 aa11.68□□□□□ -0.54
MPE1YKL059C MYO2P19524 1574 aaKnown RBP11.65□□□□□ -0.55
MPE1YKL059C SKI3P17883 1432 aaKnown RBP11.62□□□□□ -0.55
MPE1YKL059C DIP2Q12220 943 aaPredicted RBP11.56□□□□□ -0.56
MPE1YKL059C YPK9Q12697 1472 aa11.52□□□□□ -0.57
MPE1YKL059C BPT1P14772 1559 aa11.47□□□□□ -0.57
MPE1YKL059C SCC2Q04002 1493 aa11.42□□□□□ -0.58
MPE1YKL059C UFD4P33202 1483 aa11.38□□□□□ -0.59
MPE1YKL059C RPO31P04051 1460 aa11.37□□□□□ -0.59
MPE1YKL059C AVT3P36062 692 aa11.35□□□□□ -0.59
MPE1YKL059C POL1P13382 1468 aa11.33□□□□□ -0.6
MPE1YKL059C FAP1P53971 965 aa11.3□□□□□ -0.6
MPE1YKL059C YCF1P39109 1515 aaKnown RBP11.29□□□□□ -0.6
MPE1YKL059C RKR1Q04781 1562 aa11.28□□□□□ -0.6
MPE1YKL059C TY2B-LR1P0C2J3 1770 aa11.27□□□□□ -0.6
MPE1YKL059C TY2B-FP0CX63 1770 aa11.27□□□□□ -0.6
MPE1YKL059C TY2B-GR2P0CX64 1770 aa11.27□□□□□ -0.6
MPE1YKL059C TY2B-CP25384 1770 aa11.27□□□□□ -0.6
MPE1YKL059C TY2B-DR2Q03494 1770 aa11.27□□□□□ -0.6
MPE1YKL059C TY1B-DR1Q03855 1755 aa11.27□□□□□ -0.6
MPE1YKL059C TY2B-DR3Q07791 1770 aaKnown RBP11.27□□□□□ -0.6
MPE1YKL059C TY2B-OR1Q12113 1770 aa11.27□□□□□ -0.6
MPE1YKL059C TY2B-DR1Q12472 1770 aa11.27□□□□□ -0.6
MPE1YKL059C TY2B-OR2Q12501 1770 aa11.27□□□□□ -0.6
MPE1YKL059C TOP2P06786 1428 aaKnown RBP11.26□□□□□ -0.61
MPE1YKL059C STU1P38198 1513 aa11.22□□□□□ -0.61
MPE1YKL059C YOR1P53049 1477 aa11.19□□□□□ -0.62
MPE1YKL059C CDC25P04821 1589 aa11.18□□□□□ -0.62
MPE1YKL059C TY1B-DR3Q99231 1755 aa11.17□□□□□ -0.62
MPE1YKL059C SMC4Q12267 1418 aa11.17□□□□□ -0.62
MPE1YKL059C TY1B-BRQ12193 1756 aa11.16□□□□□ -0.62
MPE1YKL059C TY1B-GR3Q12316 1755 aa11.16□□□□□ -0.62
MPE1YKL059C TY2B-BQ12491 1770 aa11.16□□□□□ -0.62
MPE1YKL059C TY1B-ORQ92393 1755 aa11.16□□□□□ -0.62
MPE1YKL059C CHD1P32657 1468 aa11.15□□□□□ -0.63
MPE1YKL059C YTA7P40340 1379 aa11.13□□□□□ -0.63
MPE1YKL059C TY1B-HO13535 1793 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-DR5P0C2I2 1755 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-DR6P0C2I3 1755 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-LR2P0C2I5 1755 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-LR3P0C2I6 1755 aaKnown RBP11.12□□□□□ -0.63
MPE1YKL059C TY1B-PR1P0C2I9 1755 aaKnown RBP11.12□□□□□ -0.63
MPE1YKL059C TY1B-PR2P0C2J0 1756 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-PR3P0C2J1 1755 aaKnown RBP11.12□□□□□ -0.63
MPE1YKL059C TY1B-JR1P47098 1755 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-ML2Q03434 1755 aaKnown RBP11.12□□□□□ -0.63
MPE1YKL059C TY1B-ER1Q03612 1755 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-ML1Q04711 1755 aaKnown RBP11.12□□□□□ -0.63
MPE1YKL059C TY1B-GR2Q12269 1755 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-OLQ12273 1755 aa11.12□□□□□ -0.63
MPE1YKL059C TY1B-PLQ12414 1755 aaKnown RBP11.12□□□□□ -0.63
MPE1YKL059C ESC1Q03661 1658 aaKnown RBP11.1□□□□□ -0.63
MPE1YKL059C ISW2Q08773 1120 aa11.09□□□□□ -0.63
MPE1YKL059C PAN1P32521 1480 aa11.09□□□□□ -0.63
MPE1YKL059C RQC2Q12532 1038 aaKnown RBP11.08□□□□□ -0.64
MPE1YKL059C MYO4P32492 1471 aa11.07□□□□□ -0.64
MPE1YKL059C MMS22Q06164 1454 aa11.07□□□□□ -0.64
MPE1YKL059C SPP41P38904 1435 aa11.01□□□□□ -0.65
MPE1YKL059C RPA190P10964 1664 aaKnown RBP10.99□□□□□ -0.65
MPE1YKL059C DNF1P32660 1571 aa10.98□□□□□ -0.65
MPE1YKL059C TRM732Q03496 1420 aa10.96□□□□□ -0.65
MPE1YKL059C MET5P47169 1442 aa10.94□□□□□ -0.66
MPE1YKL059C TSC11P40061 1430 aa10.93□□□□□ -0.66
MPE1YKL059C VTH1P40438 1549 aa10.93□□□□□ -0.66
MPE1YKL059C VTH2P40890 1549 aa10.93□□□□□ -0.66
MPE1YKL059C PRI1P10363 409 aa10.92□□□□□ -0.66
MPE1YKL059C RPG1P38249 964 aaKnown RBP10.92□□□□□ -0.66
MPE1YKL059C TY1B-JR2P47100 1755 aaKnown RBP10.92□□□□□ -0.66
MPE1YKL059C TY1B-ER2Q03619 1755 aa10.92□□□□□ -0.66
MPE1YKL059C TY1B-MR1Q04214 1755 aa10.92□□□□□ -0.66
MPE1YKL059C TY1B-MR2Q04670 1755 aaKnown RBP10.92□□□□□ -0.66
MPE1YKL059C TY1B-LR1Q12088 1755 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms