RNA–Protein interactions for RNA: YJR135W-A

TIM8, Transcript of Mitochondrial intermembrane space protein, yeastyeast

Gene TIM8, Length 264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM8YJR135W-A MTC1P47018 478 aaKnown RBP9.61□□□□□ -0.87
TIM8YJR135W-A FAP1P53971 965 aa9.51□□□□□ -0.89
TIM8YJR135W-A PRY3P47033 881 aa8.97□□□□□ -0.97
TIM8YJR135W-A YCK3P39962 524 aa8.49□□□□□ -1.05
TIM8YJR135W-A AAD16Q02895 342 aa8.49□□□□□ -1.05
TIM8YJR135W-A PRI1P10363 409 aa8.45□□□□□ -1.06
TIM8YJR135W-A DRS1P32892 752 aaKnown RBP8.33□□□□□ -1.08
TIM8YJR135W-A HAA1Q12753 694 aaKnown RBP8.25□□□□□ -1.09
TIM8YJR135W-A ISW2Q08773 1120 aa8.11□□□□□ -1.11
TIM8YJR135W-A RPG1P38249 964 aaKnown RBP8.04□□□□□ -1.12
TIM8YJR135W-A TSR3Q12094 313 aaKnown RBP8.04□□□□□ -1.12
TIM8YJR135W-A MRPL32P25348 183 aa7.66□□□□□ -1.18
TIM8YJR135W-A DIP2Q12220 943 aaPredicted RBP7.54□□□□□ -1.2
TIM8YJR135W-A YGL015CP33199 130 aa7.53□□□□□ -1.2
TIM8YJR135W-A RSE1Q04693 1361 aaKnown RBP7.47□□□□□ -1.21
TIM8YJR135W-A REB1P21538 810 aa7.29□□□□□ -1.24
TIM8YJR135W-A RPL17AP05740 184 aaKnown RBP7.27□□□□□ -1.25
TIM8YJR135W-A RPL17BP46990 184 aaKnown RBP7.27□□□□□ -1.25
TIM8YJR135W-A BUD31P25337 157 aaPredicted RBP7.2□□□□□ -1.26
TIM8YJR135W-A CDC27P38042 758 aa7.19□□□□□ -1.26
TIM8YJR135W-A AVT3P36062 692 aa7.1□□□□□ -1.27
TIM8YJR135W-A BFR2Q06631 534 aaKnown RBP7.08□□□□□ -1.28
TIM8YJR135W-A UBP10P53874 792 aaPredicted RBP7.05□□□□□ -1.28
TIM8YJR135W-A MAP2P38174 421 aaKnown RBP7.04□□□□□ -1.28
TIM8YJR135W-A YKR023WP36119 530 aaKnown RBP6.98□□□□□ -1.29
TIM8YJR135W-A DCD1P06773 312 aa6.93□□□□□ -1.3
TIM8YJR135W-A SPT21P35209 758 aa6.91□□□□□ -1.3
TIM8YJR135W-A HOP09932 586 aa6.88□□□□□ -1.31
TIM8YJR135W-A TFC8Q12308 588 aa6.84□□□□□ -1.31
TIM8YJR135W-A SIS1P25294 352 aaKnown RBP6.82□□□□□ -1.32
TIM8YJR135W-A TIF4632P39936 914 aaKnown RBP6.77□□□□□ -1.33
TIM8YJR135W-A TGL3P40308 642 aa6.76□□□□□ -1.33
TIM8YJR135W-A SCY1P53009 804 aa6.75□□□□□ -1.33
TIM8YJR135W-A UBP9P39967 754 aa6.74□□□□□ -1.33
TIM8YJR135W-A SLX5P32828 619 aaKnown RBP6.7□□□□□ -1.34
TIM8YJR135W-A TFA1P36100 482 aa6.64□□□□□ -1.35
TIM8YJR135W-A BCH2P36122 765 aa6.59□□□□□ -1.35
TIM8YJR135W-A RIM101P33400 625 aa6.55□□□□□ -1.36
TIM8YJR135W-A MST1P07236 462 aa6.4□□□□□ -1.38
TIM8YJR135W-A YBL029C-AQ3E756 94 aa6.4□□□□□ -1.38
TIM8YJR135W-A EPS1P40557 701 aa6.38□□□□□ -1.39
TIM8YJR135W-A BDF1P35817 686 aa6.37□□□□□ -1.39
TIM8YJR135W-A YOR238WQ08634 303 aa6.34□□□□□ -1.39
TIM8YJR135W-A OXP1P28273 1286 aa6.29□□□□□ -1.4
TIM8YJR135W-A VNX1P42839 908 aa6.29□□□□□ -1.4
TIM8YJR135W-A NSR1P27476 414 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
TIM8YJR135W-A YIL055CP40523 627 aaKnown RBP6.22□□□□□ -1.41
TIM8YJR135W-A SPP1Q03012 353 aa6.22□□□□□ -1.41
TIM8YJR135W-A PTP3P40048 928 aa6.21□□□□□ -1.42
TIM8YJR135W-A YAP5P40574 245 aa6.21□□□□□ -1.42
TIM8YJR135W-A WSC3Q12215 556 aa6.21□□□□□ -1.42
TIM8YJR135W-A BBC1P47068 1157 aa6.17□□□□□ -1.42
TIM8YJR135W-A AIR2Q12476 344 aaKnown RBP6.16□□□□□ -1.42
TIM8YJR135W-A YJL171CP46992 396 aa6.14□□□□□ -1.43
TIM8YJR135W-A TIF11P38912 153 aaKnown RBP6.13□□□□□ -1.43
TIM8YJR135W-A FKH1P40466 484 aa6.13□□□□□ -1.43
TIM8YJR135W-A RSM7P47150 247 aa6.13□□□□□ -1.43
TIM8YJR135W-A AI2P03876 854 aa6.11□□□□□ -1.43
TIM8YJR135W-A GTT3P39996 337 aa6.08□□□□□ -1.44
TIM8YJR135W-A LDB19Q12502 818 aa6.02□□□□□ -1.45
TIM8YJR135W-A ULI1P43604 169 aa6.01□□□□□ -1.45
TIM8YJR135W-A PIB1Q06651 286 aa6.01□□□□□ -1.45
TIM8YJR135W-A IOC2Q12072 812 aa6.01□□□□□ -1.45
TIM8YJR135W-A BMT6Q12291 365 aa6.01□□□□□ -1.45
TIM8YJR135W-A YAH1Q12184 172 aaKnown RBP6□□□□□ -1.45
TIM8YJR135W-A MSB4Q12317 492 aa5.93□□□□□ -1.46
TIM8YJR135W-A EAP1P36041 632 aaKnown RBP5.92□□□□□ -1.46
TIM8YJR135W-A YLR271WQ06152 274 aa5.89□□□□□ -1.47
TIM8YJR135W-A PSD2P53037 1138 aaKnown RBP5.88□□□□□ -1.47
TIM8YJR135W-A RTG1P32607 177 aa5.87□□□□□ -1.47
TIM8YJR135W-A NCR1Q12200 1170 aa5.86□□□□□ -1.47
TIM8YJR135W-A MRM1P25270 412 aa5.85□□□□□ -1.47
TIM8YJR135W-A TRP5P00931 707 aaKnown RBP5.84□□□□□ -1.47
TIM8YJR135W-A YOL036WQ08206 761 aa5.84□□□□□ -1.47
TIM8YJR135W-A SET4P42948 560 aa5.83□□□□□ -1.48
TIM8YJR135W-A SEC61P32915 480 aa5.82□□□□□ -1.48
TIM8YJR135W-A YNL035CP53962 389 aaKnown RBP5.82□□□□□ -1.48
TIM8YJR135W-A SSP1P38871 571 aa5.79□□□□□ -1.48
TIM8YJR135W-A YMR1P47147 688 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
TIM8YJR135W-A DBP1P24784 617 aaKnown RBP5.76□□□□□ -1.49
TIM8YJR135W-A VPS29P38759 282 aa5.75□□□□□ -1.49
TIM8YJR135W-A TFG1P41895 735 aaPredicted RBP5.75□□□□□ -1.49
TIM8YJR135W-A SAM3Q08986 587 aa5.75□□□□□ -1.49
TIM8YJR135W-A VMA1P17255 1071 aaKnown RBP5.74□□□□□ -1.49
TIM8YJR135W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
TIM8YJR135W-A YFR006WP43590 535 aa5.72□□□□□ -1.49
TIM8YJR135W-A BCK2P33306 851 aa5.71□□□□□ -1.5
TIM8YJR135W-A RTG3P38165 486 aa5.71□□□□□ -1.5
TIM8YJR135W-A SAP30P38429 201 aa5.69□□□□□ -1.5
TIM8YJR135W-A STS1P38637 319 aa5.69□□□□□ -1.5
TIM8YJR135W-A DAN4P47179 1161 aa5.69□□□□□ -1.5
TIM8YJR135W-A JIP4Q03361 876 aa5.69□□□□□ -1.5
TIM8YJR135W-A CHL1P22516 861 aaPredicted RBP5.68□□□□□ -1.5
TIM8YJR135W-A YDL129WQ07555 291 aa5.67□□□□□ -1.5
TIM8YJR135W-A ABP1P15891 592 aaKnown RBP5.66□□□□□ -1.5
TIM8YJR135W-A PRE3P38624 215 aa5.64□□□□□ -1.51
TIM8YJR135W-A CST9Q06032 482 aa5.64□□□□□ -1.51
TIM8YJR135W-A GYP5Q12344 894 aa5.63□□□□□ -1.51
TIM8YJR135W-A RQC2Q12532 1038 aaKnown RBP5.63□□□□□ -1.51
TIM8YJR135W-A MGA2P40578 1113 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms