RNA–Protein interactions for RNA: YJL151C

SNA3, Transcript of Protein involved in efficient MVB sorting of proteins to the vacuole, yeastyeast

Gene SNA3, Length 402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNA3YJL151C SGS1P35187 1447 aa12.86□□□□□ -0.35
SNA3YJL151C SPA2P23201 1466 aaKnown RBP12.47□□□□□ -0.41
SNA3YJL151C SSN2P38931 1420 aa12.45□□□□□ -0.42
SNA3YJL151C INO80P53115 1489 aa12.4□□□□□ -0.43
SNA3YJL151C TCB3Q03640 1545 aaKnown RBP12.14□□□□□ -0.47
SNA3YJL151C TY1B-DR4Q07793 1604 aa12.08□□□□□ -0.48
SNA3YJL151C DRS1P32892 752 aaKnown RBP11.97□□□□□ -0.49
SNA3YJL151C HSL1P34244 1518 aa11.91□□□□□ -0.5
SNA3YJL151C SPT6P23615 1451 aaKnown RBP11.83□□□□□ -0.52
SNA3YJL151C HIR3P47171 1648 aa11.72□□□□□ -0.53
SNA3YJL151C MON2P48563 1636 aaPredicted RBP11.71□□□□□ -0.54
SNA3YJL151C XRN1P22147 1528 aaKnown RBP11.66□□□□□ -0.54
SNA3YJL151C SWR1Q05471 1514 aa11.65□□□□□ -0.54
SNA3YJL151C REV3P14284 1504 aa11.54□□□□□ -0.56
SNA3YJL151C SIN3P22579 1536 aa11.45□□□□□ -0.58
SNA3YJL151C SSK2P53599 1579 aa11.41□□□□□ -0.58
SNA3YJL151C TAF2P23255 1407 aa11.41□□□□□ -0.58
SNA3YJL151C THO2P53552 1597 aaKnown RBP11.41□□□□□ -0.58
SNA3YJL151C SKI3P17883 1432 aaKnown RBP11.34□□□□□ -0.59
SNA3YJL151C ESP1Q03018 1630 aa11.3□□□□□ -0.6
SNA3YJL151C MMS22Q06164 1454 aa11.29□□□□□ -0.6
SNA3YJL151C CHD1P32657 1468 aa11.26□□□□□ -0.61
SNA3YJL151C MYO2P19524 1574 aaKnown RBP11.18□□□□□ -0.62
SNA3YJL151C DNA2P38859 1522 aa11.18□□□□□ -0.62
SNA3YJL151C ATG2P53855 1592 aa11.17□□□□□ -0.62
SNA3YJL151C POL1P13382 1468 aa11.16□□□□□ -0.62
SNA3YJL151C STU1P38198 1513 aa11.15□□□□□ -0.62
SNA3YJL151C BPT1P14772 1559 aa11.12□□□□□ -0.63
SNA3YJL151C BUD4P47136 1447 aa11.1□□□□□ -0.63
SNA3YJL151C YPK9Q12697 1472 aa11.08□□□□□ -0.64
SNA3YJL151C ECM5Q03214 1411 aa11.08□□□□□ -0.64
SNA3YJL151C KOG1P38873 1557 aa11.07□□□□□ -0.64
SNA3YJL151C RSE1Q04693 1361 aaKnown RBP11.05□□□□□ -0.64
SNA3YJL151C PEP1P32319 1579 aa11.03□□□□□ -0.64
SNA3YJL151C SCC2Q04002 1493 aa11□□□□□ -0.65
SNA3YJL151C YTA7P40340 1379 aa10.99□□□□□ -0.65
SNA3YJL151C RKR1Q04781 1562 aa10.99□□□□□ -0.65
SNA3YJL151C YOR1P53049 1477 aa10.97□□□□□ -0.65
SNA3YJL151C SAS10Q12136 610 aaPredicted RBP10.96□□□□□ -0.65
SNA3YJL151C RPO31P04051 1460 aa10.93□□□□□ -0.66
SNA3YJL151C TRM732Q03496 1420 aa10.93□□□□□ -0.66
SNA3YJL151C UFD4P33202 1483 aa10.93□□□□□ -0.66
SNA3YJL151C MDS3P53094 1487 aa10.93□□□□□ -0.66
SNA3YJL151C MYO4P32492 1471 aa10.87□□□□□ -0.67
SNA3YJL151C YCF1P39109 1515 aaKnown RBP10.86□□□□□ -0.67
SNA3YJL151C TY2B-LR1P0C2J3 1770 aa10.85□□□□□ -0.67
SNA3YJL151C TY2B-FP0CX63 1770 aa10.85□□□□□ -0.67
SNA3YJL151C TY2B-GR2P0CX64 1770 aa10.85□□□□□ -0.67
SNA3YJL151C TY2B-CP25384 1770 aa10.85□□□□□ -0.67
SNA3YJL151C TY2B-DR2Q03494 1770 aa10.85□□□□□ -0.67
SNA3YJL151C TY1B-DR1Q03855 1755 aa10.85□□□□□ -0.67
SNA3YJL151C TY2B-DR3Q07791 1770 aaKnown RBP10.85□□□□□ -0.67
SNA3YJL151C TY2B-OR1Q12113 1770 aa10.85□□□□□ -0.67
SNA3YJL151C TY2B-DR1Q12472 1770 aa10.85□□□□□ -0.67
SNA3YJL151C TY2B-OR2Q12501 1770 aa10.85□□□□□ -0.67
SNA3YJL151C TY1B-DR3Q99231 1755 aa10.85□□□□□ -0.67
SNA3YJL151C TOP2P06786 1428 aaKnown RBP10.84□□□□□ -0.67
SNA3YJL151C SMC4Q12267 1418 aa10.84□□□□□ -0.67
SNA3YJL151C SNQ2P32568 1501 aaKnown RBP10.8□□□□□ -0.68
SNA3YJL151C IKI3Q06706 1349 aaKnown RBP10.77□□□□□ -0.69
SNA3YJL151C TY2B-BQ12491 1770 aa10.76□□□□□ -0.69
SNA3YJL151C NUP170P38181 1502 aa10.74□□□□□ -0.69
SNA3YJL151C SSM4P40318 1319 aa10.73□□□□□ -0.69
SNA3YJL151C STH1P32597 1359 aa10.73□□□□□ -0.69
SNA3YJL151C MLP2P40457 1679 aa10.69□□□□□ -0.7
SNA3YJL151C PDR15Q04182 1529 aaKnown RBP10.68□□□□□ -0.7
SNA3YJL151C ULS1Q08562 1619 aa10.67□□□□□ -0.7
SNA3YJL151C TY1B-HO13535 1793 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-DR5P0C2I2 1755 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-DR6P0C2I3 1755 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-LR2P0C2I5 1755 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-LR3P0C2I6 1755 aaKnown RBP10.65□□□□□ -0.7
SNA3YJL151C TY1B-PR1P0C2I9 1755 aaKnown RBP10.65□□□□□ -0.7
SNA3YJL151C TY1B-PR2P0C2J0 1756 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-PR3P0C2J1 1755 aaKnown RBP10.65□□□□□ -0.7
SNA3YJL151C TY1B-JR1P47098 1755 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-ML2Q03434 1755 aaKnown RBP10.65□□□□□ -0.7
SNA3YJL151C TY1B-ER1Q03612 1755 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-ML1Q04711 1755 aaKnown RBP10.65□□□□□ -0.7
SNA3YJL151C TY1B-BRQ12193 1756 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-GR2Q12269 1755 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-OLQ12273 1755 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-GR3Q12316 1755 aa10.65□□□□□ -0.7
SNA3YJL151C TY1B-PLQ12414 1755 aaKnown RBP10.65□□□□□ -0.7
SNA3YJL151C TY1B-ORQ92393 1755 aa10.65□□□□□ -0.7
SNA3YJL151C GEA1P47102 1408 aaPredicted RBP10.62□□□□□ -0.71
SNA3YJL151C IFH1P39520 1085 aa10.62□□□□□ -0.71
SNA3YJL151C TAF7Q05021 590 aa10.62□□□□□ -0.71
SNA3YJL151C TY3B-GQ99315 1547 aa10.61□□□□□ -0.71
SNA3YJL151C SPP41P38904 1435 aa10.6□□□□□ -0.71
SNA3YJL151C NSR1P27476 414 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
SNA3YJL151C TSC11P40061 1430 aa10.57□□□□□ -0.72
SNA3YJL151C VTH1P40438 1549 aa10.53□□□□□ -0.72
SNA3YJL151C VTH2P40890 1549 aa10.53□□□□□ -0.72
SNA3YJL151C SNT2P53127 1403 aa10.51□□□□□ -0.73
SNA3YJL151C TY1B-JR2P47100 1755 aaKnown RBP10.49□□□□□ -0.73
SNA3YJL151C TY1B-ER2Q03619 1755 aa10.49□□□□□ -0.73
SNA3YJL151C TY1B-MR1Q04214 1755 aa10.49□□□□□ -0.73
SNA3YJL151C TY1B-MR2Q04670 1755 aaKnown RBP10.49□□□□□ -0.73
SNA3YJL151C TY1B-LR1Q12088 1755 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms