RNA–Protein interactions for RNA: YJL148W

RPA34, Transcript of RNA polymerase I subunit A34.5, yeastyeast

Gene RPA34, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA34YJL148W MTC1P47018 478 aaKnown RBP11.46□□□□□ -0.57
RPA34YJL148W FAP1P53971 965 aa11.19□□□□□ -0.62
RPA34YJL148W PRY3P47033 881 aa10.56□□□□□ -0.72
RPA34YJL148W AAD16Q02895 342 aa10.15□□□□□ -0.78
RPA34YJL148W PRI1P10363 409 aa10.12□□□□□ -0.79
RPA34YJL148W YCK3P39962 524 aa9.99□□□□□ -0.81
RPA34YJL148W HAA1Q12753 694 aaKnown RBP9.89□□□□□ -0.83
RPA34YJL148W DRS1P32892 752 aaKnown RBP9.85□□□□□ -0.83
RPA34YJL148W ISW2Q08773 1120 aa9.67□□□□□ -0.86
RPA34YJL148W RPG1P38249 964 aaKnown RBP9.57□□□□□ -0.88
RPA34YJL148W TSR3Q12094 313 aaKnown RBP9.49□□□□□ -0.89
RPA34YJL148W MRPL32P25348 183 aa9.13□□□□□ -0.95
RPA34YJL148W YGL015CP33199 130 aa8.99□□□□□ -0.97
RPA34YJL148W DIP2Q12220 943 aaPredicted RBP8.94□□□□□ -0.98
RPA34YJL148W RSE1Q04693 1361 aaKnown RBP8.88□□□□□ -0.99
RPA34YJL148W REB1P21538 810 aa8.67□□□□□ -1.02
RPA34YJL148W RPL17AP05740 184 aaKnown RBP8.64□□□□□ -1.03
RPA34YJL148W RPL17BP46990 184 aaKnown RBP8.64□□□□□ -1.03
RPA34YJL148W BUD31P25337 157 aaPredicted RBP8.63□□□□□ -1.03
RPA34YJL148W CDC27P38042 758 aa8.54□□□□□ -1.04
RPA34YJL148W UBP10P53874 792 aaPredicted RBP8.44□□□□□ -1.06
RPA34YJL148W AVT3P36062 692 aa8.41□□□□□ -1.06
RPA34YJL148W MAP2P38174 421 aaKnown RBP8.37□□□□□ -1.07
RPA34YJL148W YKR023WP36119 530 aaKnown RBP8.32□□□□□ -1.08
RPA34YJL148W SPT21P35209 758 aa8.26□□□□□ -1.09
RPA34YJL148W TFC8Q12308 588 aa8.16□□□□□ -1.1
RPA34YJL148W HOP09932 586 aa8.13□□□□□ -1.11
RPA34YJL148W DCD1P06773 312 aa8.11□□□□□ -1.11
RPA34YJL148W SIS1P25294 352 aaKnown RBP8.11□□□□□ -1.11
RPA34YJL148W TIF4632P39936 914 aaKnown RBP8.08□□□□□ -1.12
RPA34YJL148W TGL3P40308 642 aa8.06□□□□□ -1.12
RPA34YJL148W UBP9P39967 754 aa8.05□□□□□ -1.12
RPA34YJL148W SCY1P53009 804 aa8.05□□□□□ -1.12
RPA34YJL148W SLX5P32828 619 aaKnown RBP8□□□□□ -1.13
RPA34YJL148W BCH2P36122 765 aa7.85□□□□□ -1.15
RPA34YJL148W BFR2Q06631 534 aaKnown RBP7.8□□□□□ -1.16
RPA34YJL148W RIM101P33400 625 aa7.77□□□□□ -1.17
RPA34YJL148W MST1P07236 462 aa7.65□□□□□ -1.18
RPA34YJL148W YBL029C-AQ3E756 94 aa7.62□□□□□ -1.19
RPA34YJL148W EPS1P40557 701 aa7.6□□□□□ -1.19
RPA34YJL148W BDF1P35817 686 aa7.59□□□□□ -1.19
RPA34YJL148W YOR238WQ08634 303 aa7.55□□□□□ -1.2
RPA34YJL148W NSR1P27476 414 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
RPA34YJL148W VNX1P42839 908 aa7.51□□□□□ -1.21
RPA34YJL148W OXP1P28273 1286 aa7.46□□□□□ -1.22
RPA34YJL148W SPP1Q03012 353 aa7.43□□□□□ -1.22
RPA34YJL148W YAP5P40574 245 aa7.39□□□□□ -1.23
RPA34YJL148W AIR2Q12476 344 aaKnown RBP7.39□□□□□ -1.23
RPA34YJL148W PTP3P40048 928 aa7.37□□□□□ -1.23
RPA34YJL148W FKH1P40466 484 aa7.36□□□□□ -1.23
RPA34YJL148W WSC3Q12215 556 aa7.35□□□□□ -1.23
RPA34YJL148W YIL055CP40523 627 aaKnown RBP7.33□□□□□ -1.24
RPA34YJL148W TIF11P38912 153 aaKnown RBP7.32□□□□□ -1.24
RPA34YJL148W YJL171CP46992 396 aa7.32□□□□□ -1.24
RPA34YJL148W BBC1P47068 1157 aa7.32□□□□□ -1.24
RPA34YJL148W AI2P03876 854 aa7.25□□□□□ -1.25
RPA34YJL148W RSM7P47150 247 aa7.25□□□□□ -1.25
RPA34YJL148W GTT3P39996 337 aa7.24□□□□□ -1.25
RPA34YJL148W LDB19Q12502 818 aa7.21□□□□□ -1.26
RPA34YJL148W IOC2Q12072 812 aa7.18□□□□□ -1.26
RPA34YJL148W BMT6Q12291 365 aa7.18□□□□□ -1.26
RPA34YJL148W ULI1P43604 169 aa7.16□□□□□ -1.26
RPA34YJL148W YAH1Q12184 172 aaKnown RBP7.1□□□□□ -1.27
RPA34YJL148W MSB4Q12317 492 aa7.08□□□□□ -1.28
RPA34YJL148W PIB1Q06651 286 aa7.06□□□□□ -1.28
RPA34YJL148W EAP1P36041 632 aaKnown RBP7.04□□□□□ -1.28
RPA34YJL148W RTG1P32607 177 aa7□□□□□ -1.29
RPA34YJL148W PSD2P53037 1138 aaKnown RBP7□□□□□ -1.29
RPA34YJL148W YLR271WQ06152 274 aa6.98□□□□□ -1.29
RPA34YJL148W YOL036WQ08206 761 aa6.97□□□□□ -1.29
RPA34YJL148W NCR1Q12200 1170 aa6.97□□□□□ -1.29
RPA34YJL148W TRP5P00931 707 aaKnown RBP6.96□□□□□ -1.3
RPA34YJL148W MRM1P25270 412 aa6.94□□□□□ -1.3
RPA34YJL148W SEC61P32915 480 aa6.94□□□□□ -1.3
RPA34YJL148W SET4P42948 560 aa6.94□□□□□ -1.3
RPA34YJL148W YNL035CP53962 389 aaKnown RBP6.93□□□□□ -1.3
RPA34YJL148W YMR1P47147 688 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
RPA34YJL148W SAM3Q08986 587 aa6.84□□□□□ -1.31
RPA34YJL148W VMA1P17255 1071 aaKnown RBP6.83□□□□□ -1.32
RPA34YJL148W DBP1P24784 617 aaKnown RBP6.83□□□□□ -1.32
RPA34YJL148W BCK2P33306 851 aa6.83□□□□□ -1.32
RPA34YJL148W VPS29P38759 282 aa6.82□□□□□ -1.32
RPA34YJL148W TFG1P41895 735 aaPredicted RBP6.82□□□□□ -1.32
RPA34YJL148W SAP30P38429 201 aa6.79□□□□□ -1.32
RPA34YJL148W YFR006WP43590 535 aa6.79□□□□□ -1.32
RPA34YJL148W DAN4P47179 1161 aa6.79□□□□□ -1.32
RPA34YJL148W STS1P38637 319 aa6.78□□□□□ -1.32
RPA34YJL148W CHL1P22516 861 aaPredicted RBP6.77□□□□□ -1.33
RPA34YJL148W JIP4Q03361 876 aa6.77□□□□□ -1.33
RPA34YJL148W YDL129WQ07555 291 aa6.76□□□□□ -1.33
RPA34YJL148W ABP1P15891 592 aaKnown RBP6.74□□□□□ -1.33
RPA34YJL148W RTG3P38165 486 aa6.74□□□□□ -1.33
RPA34YJL148W PRE3P38624 215 aa6.73□□□□□ -1.33
RPA34YJL148W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
RPA34YJL148W TFA1P36100 482 aa6.7□□□□□ -1.34
RPA34YJL148W CST9Q06032 482 aa6.69□□□□□ -1.34
RPA34YJL148W SSP1P38871 571 aa6.68□□□□□ -1.34
RPA34YJL148W GYP5Q12344 894 aa6.68□□□□□ -1.34
RPA34YJL148W HTA1P04911 132 aaKnown RBP6.67□□□□□ -1.34
RPA34YJL148W HTA2P04912 132 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms