RNA–Protein interactions for RNA: YJL142C

IRC9, Transcript of Dubious open reading frame, yeastyeast

Gene IRC9, Length 393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC9YJL142C MTC1P47018 478 aaKnown RBP17.55■□□□□ 0.4
IRC9YJL142C FAP1P53971 965 aa16.99■□□□□ 0.31
IRC9YJL142C PRY3P47033 881 aa16■□□□□ 0.15
IRC9YJL142C AAD16Q02895 342 aa15.45■□□□□ 0.06
IRC9YJL142C PRI1P10363 409 aa15.4■□□□□ 0.06
IRC9YJL142C DRS1P32892 752 aaKnown RBP15.32■□□□□ 0.04
IRC9YJL142C YCK3P39962 524 aa15.06■□□□□ 0
IRC9YJL142C HAA1Q12753 694 aaKnown RBP14.99□□□□□ -0.01
IRC9YJL142C ISW2Q08773 1120 aa14.8□□□□□ -0.04
IRC9YJL142C RPG1P38249 964 aaKnown RBP14.66□□□□□ -0.06
IRC9YJL142C TSR3Q12094 313 aaKnown RBP14.49□□□□□ -0.09
IRC9YJL142C MRPL32P25348 183 aa13.96□□□□□ -0.17
IRC9YJL142C DIP2Q12220 943 aaPredicted RBP13.84□□□□□ -0.19
IRC9YJL142C YGL015CP33199 130 aa13.7□□□□□ -0.22
IRC9YJL142C RSE1Q04693 1361 aaKnown RBP13.68□□□□□ -0.22
IRC9YJL142C REB1P21538 810 aa13.35□□□□□ -0.27
IRC9YJL142C RPL17AP05740 184 aaKnown RBP13.29□□□□□ -0.28
IRC9YJL142C RPL17BP46990 184 aaKnown RBP13.29□□□□□ -0.28
IRC9YJL142C AVT3P36062 692 aa13.03□□□□□ -0.32
IRC9YJL142C CDC27P38042 758 aa13.03□□□□□ -0.32
IRC9YJL142C BUD31P25337 157 aaPredicted RBP13□□□□□ -0.33
IRC9YJL142C UBP10P53874 792 aaPredicted RBP12.83□□□□□ -0.36
IRC9YJL142C YKR023WP36119 530 aaKnown RBP12.75□□□□□ -0.37
IRC9YJL142C MAP2P38174 421 aaKnown RBP12.75□□□□□ -0.37
IRC9YJL142C SPT21P35209 758 aa12.63□□□□□ -0.39
IRC9YJL142C TFC8Q12308 588 aa12.5□□□□□ -0.41
IRC9YJL142C HOP09932 586 aa12.48□□□□□ -0.41
IRC9YJL142C DCD1P06773 312 aa12.43□□□□□ -0.42
IRC9YJL142C TIF4632P39936 914 aaKnown RBP12.33□□□□□ -0.44
IRC9YJL142C TGL3P40308 642 aa12.31□□□□□ -0.44
IRC9YJL142C SCY1P53009 804 aa12.3□□□□□ -0.44
IRC9YJL142C SIS1P25294 352 aaKnown RBP12.28□□□□□ -0.44
IRC9YJL142C UBP9P39967 754 aa12.26□□□□□ -0.45
IRC9YJL142C SLX5P32828 619 aaKnown RBP12.23□□□□□ -0.45
IRC9YJL142C BFR2Q06631 534 aaKnown RBP12.22□□□□□ -0.45
IRC9YJL142C BCH2P36122 765 aa12.05□□□□□ -0.48
IRC9YJL142C RIM101P33400 625 aa12□□□□□ -0.49
IRC9YJL142C MST1P07236 462 aa11.66□□□□□ -0.54
IRC9YJL142C EPS1P40557 701 aa11.66□□□□□ -0.54
IRC9YJL142C BDF1P35817 686 aa11.65□□□□□ -0.54
IRC9YJL142C YBL029C-AQ3E756 94 aa11.59□□□□□ -0.55
IRC9YJL142C YOR238WQ08634 303 aa11.57□□□□□ -0.56
IRC9YJL142C OXP1P28273 1286 aa11.53□□□□□ -0.56
IRC9YJL142C VNX1P42839 908 aa11.46□□□□□ -0.57
IRC9YJL142C NSR1P27476 414 aaKnown RBP RIP-Chip data11.42□□□□□ -0.58not detected
IRC9YJL142C PTP3P40048 928 aa11.4□□□□□ -0.58
IRC9YJL142C YIL055CP40523 627 aaKnown RBP11.4□□□□□ -0.58
IRC9YJL142C SPP1Q03012 353 aa11.35□□□□□ -0.59
IRC9YJL142C YAP5P40574 245 aa11.32□□□□□ -0.6
IRC9YJL142C BBC1P47068 1157 aa11.3□□□□□ -0.6
IRC9YJL142C WSC3Q12215 556 aa11.26□□□□□ -0.61
IRC9YJL142C RSM7P47150 247 aa11.23□□□□□ -0.61
IRC9YJL142C AIR2Q12476 344 aaKnown RBP11.21□□□□□ -0.61
IRC9YJL142C AI2P03876 854 aa11.2□□□□□ -0.62
IRC9YJL142C YJL171CP46992 396 aa11.19□□□□□ -0.62
IRC9YJL142C TIF11P38912 153 aaKnown RBP11.17□□□□□ -0.62
IRC9YJL142C FKH1P40466 484 aa11.14□□□□□ -0.63
IRC9YJL142C GTT3P39996 337 aa11.1□□□□□ -0.63
IRC9YJL142C YAH1Q12184 172 aaKnown RBP11.03□□□□□ -0.64
IRC9YJL142C LDB19Q12502 818 aa10.99□□□□□ -0.65
IRC9YJL142C ULI1P43604 169 aa10.97□□□□□ -0.65
IRC9YJL142C IOC2Q12072 812 aa10.96□□□□□ -0.65
IRC9YJL142C BMT6Q12291 365 aa10.94□□□□□ -0.66
IRC9YJL142C PIB1Q06651 286 aa10.87□□□□□ -0.67
IRC9YJL142C YLR271WQ06152 274 aa10.83□□□□□ -0.68
IRC9YJL142C MSB4Q12317 492 aa10.81□□□□□ -0.68
IRC9YJL142C EAP1P36041 632 aaKnown RBP10.79□□□□□ -0.68
IRC9YJL142C PSD2P53037 1138 aaKnown RBP10.79□□□□□ -0.68
IRC9YJL142C MRM1P25270 412 aa10.73□□□□□ -0.69
IRC9YJL142C RTG1P32607 177 aa10.72□□□□□ -0.69
IRC9YJL142C NCR1Q12200 1170 aa10.7□□□□□ -0.7
IRC9YJL142C TRP5P00931 707 aaKnown RBP10.67□□□□□ -0.7
IRC9YJL142C SET4P42948 560 aa10.67□□□□□ -0.7
IRC9YJL142C YOL036WQ08206 761 aa10.67□□□□□ -0.7
IRC9YJL142C SEC61P32915 480 aa10.61□□□□□ -0.71
IRC9YJL142C YNL035CP53962 389 aaKnown RBP10.61□□□□□ -0.71
IRC9YJL142C YMR1P47147 688 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
IRC9YJL142C DBP1P24784 617 aaKnown RBP10.55□□□□□ -0.72
IRC9YJL142C TFA1P36100 482 aa10.55□□□□□ -0.72
IRC9YJL142C VPS29P38759 282 aa10.53□□□□□ -0.72
IRC9YJL142C VMA1P17255 1071 aaKnown RBP10.5□□□□□ -0.73
IRC9YJL142C TFG1P41895 735 aaPredicted RBP10.49□□□□□ -0.73
IRC9YJL142C SAM3Q08986 587 aa10.49□□□□□ -0.73
IRC9YJL142C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
IRC9YJL142C YFR006WP43590 535 aa10.48□□□□□ -0.73
IRC9YJL142C RTG3P38165 486 aa10.46□□□□□ -0.73
IRC9YJL142C STS1P38637 319 aa10.43□□□□□ -0.74
IRC9YJL142C SSP1P38871 571 aa10.43□□□□□ -0.74
IRC9YJL142C BCK2P33306 851 aa10.4□□□□□ -0.74
IRC9YJL142C SAP30P38429 201 aa10.4□□□□□ -0.74
IRC9YJL142C DAN4P47179 1161 aa10.39□□□□□ -0.75
IRC9YJL142C JIP4Q03361 876 aa10.39□□□□□ -0.75
IRC9YJL142C CST9Q06032 482 aa10.37□□□□□ -0.75
IRC9YJL142C CHL1P22516 861 aaPredicted RBP10.35□□□□□ -0.75
IRC9YJL142C YDL129WQ07555 291 aa10.34□□□□□ -0.75
IRC9YJL142C ABP1P15891 592 aaKnown RBP10.33□□□□□ -0.76
IRC9YJL142C MGA2P40578 1113 aa10.31□□□□□ -0.76
IRC9YJL142C GYP5Q12344 894 aa10.3□□□□□ -0.76
IRC9YJL142C PRE3P38624 215 aa10.28□□□□□ -0.76
IRC9YJL142C HTA1P04911 132 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms