RNA–Protein interactions for RNA: YIL119C

RPI1, Transcript of Transcription factor, allelic differences between S288C and Sigma1278b, yeastyeast

Gene RPI1, Length 1,224 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPI1YIL119C MTC1P47018 478 aaKnown RBP17.32■□□□□ 0.36
RPI1YIL119C FAP1P53971 965 aa16.8■□□□□ 0.28
RPI1YIL119C PRY3P47033 881 aa15.84■□□□□ 0.13
RPI1YIL119C AAD16Q02895 342 aa15.28■□□□□ 0.04
RPI1YIL119C PRI1P10363 409 aa15.24■□□□□ 0.03
RPI1YIL119C DRS1P32892 752 aaKnown RBP15.01□□□□□ -0.01
RPI1YIL119C YCK3P39962 524 aa15.01□□□□□ -0.01
RPI1YIL119C HAA1Q12753 694 aaKnown RBP14.83□□□□□ -0.04
RPI1YIL119C ISW2Q08773 1120 aa14.58□□□□□ -0.08
RPI1YIL119C RPG1P38249 964 aaKnown RBP14.46□□□□□ -0.09
RPI1YIL119C TSR3Q12094 313 aaKnown RBP14.32□□□□□ -0.12
RPI1YIL119C MRPL32P25348 183 aa13.76□□□□□ -0.21
RPI1YIL119C DIP2Q12220 943 aaPredicted RBP13.58□□□□□ -0.24
RPI1YIL119C YGL015CP33199 130 aa13.53□□□□□ -0.24
RPI1YIL119C RSE1Q04693 1361 aaKnown RBP13.45□□□□□ -0.26
RPI1YIL119C REB1P21538 810 aa13.12□□□□□ -0.31
RPI1YIL119C RPL17AP05740 184 aaKnown RBP13.08□□□□□ -0.32
RPI1YIL119C RPL17BP46990 184 aaKnown RBP13.08□□□□□ -0.32
RPI1YIL119C BUD31P25337 157 aaPredicted RBP12.91□□□□□ -0.34
RPI1YIL119C CDC27P38042 758 aa12.89□□□□□ -0.35
RPI1YIL119C AVT3P36062 692 aa12.81□□□□□ -0.36
RPI1YIL119C UBP10P53874 792 aaPredicted RBP12.69□□□□□ -0.38
RPI1YIL119C MAP2P38174 421 aaKnown RBP12.62□□□□□ -0.39
RPI1YIL119C YKR023WP36119 530 aaKnown RBP12.6□□□□□ -0.39
RPI1YIL119C SPT21P35209 758 aa12.48□□□□□ -0.41
RPI1YIL119C TFC8Q12308 588 aa12.34□□□□□ -0.43
RPI1YIL119C HOP09932 586 aa12.31□□□□□ -0.44
RPI1YIL119C DCD1P06773 312 aa12.28□□□□□ -0.44
RPI1YIL119C SIS1P25294 352 aaKnown RBP12.15□□□□□ -0.46
RPI1YIL119C TGL3P40308 642 aa12.15□□□□□ -0.46
RPI1YIL119C SCY1P53009 804 aa12.15□□□□□ -0.46
RPI1YIL119C TIF4632P39936 914 aaKnown RBP12.14□□□□□ -0.47
RPI1YIL119C UBP9P39967 754 aa12.09□□□□□ -0.47
RPI1YIL119C SLX5P32828 619 aaKnown RBP12.06□□□□□ -0.48
RPI1YIL119C BFR2Q06631 534 aaKnown RBP11.92□□□□□ -0.5
RPI1YIL119C BCH2P36122 765 aa11.88□□□□□ -0.51
RPI1YIL119C RIM101P33400 625 aa11.81□□□□□ -0.52
RPI1YIL119C MST1P07236 462 aa11.53□□□□□ -0.56
RPI1YIL119C EPS1P40557 701 aa11.5□□□□□ -0.57
RPI1YIL119C BDF1P35817 686 aa11.49□□□□□ -0.57
RPI1YIL119C YBL029C-AQ3E756 94 aa11.47□□□□□ -0.57
RPI1YIL119C YOR238WQ08634 303 aa11.39□□□□□ -0.59
RPI1YIL119C OXP1P28273 1286 aa11.36□□□□□ -0.59
RPI1YIL119C VNX1P42839 908 aa11.32□□□□□ -0.6
RPI1YIL119C NSR1P27476 414 aaKnown RBP RIP-Chip data11.29□□□□□ -0.6not detected
RPI1YIL119C SPP1Q03012 353 aa11.19□□□□□ -0.62
RPI1YIL119C PTP3P40048 928 aa11.18□□□□□ -0.62
RPI1YIL119C YIL055CP40523 627 aaKnown RBP11.15□□□□□ -0.62
RPI1YIL119C YAP5P40574 245 aa11.15□□□□□ -0.62
RPI1YIL119C AIR2Q12476 344 aaKnown RBP11.11□□□□□ -0.63
RPI1YIL119C WSC3Q12215 556 aa11.1□□□□□ -0.63
RPI1YIL119C BBC1P47068 1157 aa11.07□□□□□ -0.64
RPI1YIL119C FKH1P40466 484 aa11.05□□□□□ -0.64
RPI1YIL119C TIF11P38912 153 aaKnown RBP11.03□□□□□ -0.64
RPI1YIL119C RSM7P47150 247 aa11.02□□□□□ -0.65
RPI1YIL119C AI2P03876 854 aa11.01□□□□□ -0.65
RPI1YIL119C YJL171CP46992 396 aa11.01□□□□□ -0.65
RPI1YIL119C GTT3P39996 337 aa10.91□□□□□ -0.66
RPI1YIL119C LDB19Q12502 818 aa10.86□□□□□ -0.67
RPI1YIL119C IOC2Q12072 812 aa10.83□□□□□ -0.68
RPI1YIL119C ULI1P43604 169 aa10.81□□□□□ -0.68
RPI1YIL119C YAH1Q12184 172 aaKnown RBP10.81□□□□□ -0.68
RPI1YIL119C BMT6Q12291 365 aa10.79□□□□□ -0.68
RPI1YIL119C PIB1Q06651 286 aa10.71□□□□□ -0.69
RPI1YIL119C MSB4Q12317 492 aa10.65□□□□□ -0.7
RPI1YIL119C YLR271WQ06152 274 aa10.64□□□□□ -0.71
RPI1YIL119C PSD2P53037 1138 aaKnown RBP10.62□□□□□ -0.71
RPI1YIL119C EAP1P36041 632 aaKnown RBP10.61□□□□□ -0.71
RPI1YIL119C RTG1P32607 177 aa10.57□□□□□ -0.72
RPI1YIL119C MRM1P25270 412 aa10.54□□□□□ -0.72
RPI1YIL119C YOL036WQ08206 761 aa10.53□□□□□ -0.72
RPI1YIL119C TRP5P00931 707 aaKnown RBP10.52□□□□□ -0.73
RPI1YIL119C NCR1Q12200 1170 aa10.52□□□□□ -0.73
RPI1YIL119C SET4P42948 560 aa10.51□□□□□ -0.73
RPI1YIL119C SEC61P32915 480 aa10.45□□□□□ -0.74
RPI1YIL119C YNL035CP53962 389 aaKnown RBP10.45□□□□□ -0.74
RPI1YIL119C YMR1P47147 688 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75not detected
RPI1YIL119C DBP1P24784 617 aaKnown RBP10.37□□□□□ -0.75
RPI1YIL119C VPS29P38759 282 aa10.37□□□□□ -0.75
RPI1YIL119C VMA1P17255 1071 aaKnown RBP10.35□□□□□ -0.75
RPI1YIL119C SAM3Q08986 587 aa10.34□□□□□ -0.75
RPI1YIL119C YFR006WP43590 535 aa10.31□□□□□ -0.76
RPI1YIL119C STS1P38637 319 aa10.28□□□□□ -0.76
RPI1YIL119C TFG1P41895 735 aaPredicted RBP10.27□□□□□ -0.77
RPI1YIL119C DAN4P47179 1161 aa10.26□□□□□ -0.77
RPI1YIL119C BCK2P33306 851 aa10.25□□□□□ -0.77
RPI1YIL119C RTG3P38165 486 aa10.25□□□□□ -0.77
RPI1YIL119C SAP30P38429 201 aa10.24□□□□□ -0.77
RPI1YIL119C TFA1P36100 482 aa10.23□□□□□ -0.77
RPI1YIL119C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
RPI1YIL119C JIP4Q03361 876 aa10.21□□□□□ -0.77
RPI1YIL119C CHL1P22516 861 aaPredicted RBP10.2□□□□□ -0.78
RPI1YIL119C SSP1P38871 571 aa10.2□□□□□ -0.78
RPI1YIL119C CST9Q06032 482 aa10.2□□□□□ -0.78
RPI1YIL119C YDL129WQ07555 291 aa10.18□□□□□ -0.78
RPI1YIL119C ABP1P15891 592 aaKnown RBP10.14□□□□□ -0.79
RPI1YIL119C PRE3P38624 215 aa10.14□□□□□ -0.79
RPI1YIL119C GYP5Q12344 894 aa10.11□□□□□ -0.79
RPI1YIL119C MGA2P40578 1113 aa10.08□□□□□ -0.8
RPI1YIL119C HTA1P04911 132 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms