RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W DRS1P32892 752 aaKnown RBP11.66□□□□□ -0.54
NMD3YHR170W MTC1P47018 478 aaKnown RBP11.65□□□□□ -0.54
NMD3YHR170W BFR2Q06631 534 aaKnown RBP10.05□□□□□ -0.8
NMD3YHR170W DIP2Q12220 943 aaPredicted RBP9.95□□□□□ -0.82
NMD3YHR170W AVT3P36062 692 aa9.84□□□□□ -0.83
NMD3YHR170W FAP1P53971 965 aa9.72□□□□□ -0.85
NMD3YHR170W TFA1P36100 482 aa9.47□□□□□ -0.89
NMD3YHR170W ISW2Q08773 1120 aa9.42□□□□□ -0.9
NMD3YHR170W PRI1P10363 409 aa9.39□□□□□ -0.91
NMD3YHR170W RPG1P38249 964 aaKnown RBP9.37□□□□□ -0.91
NMD3YHR170W RSE1Q04693 1361 aaKnown RBP9.36□□□□□ -0.91
NMD3YHR170W AAD16Q02895 342 aa9.2□□□□□ -0.94
NMD3YHR170W PRY3P47033 881 aa9.13□□□□□ -0.95
NMD3YHR170W RPL17AP05740 184 aaKnown RBP9.03□□□□□ -0.96
NMD3YHR170W RPL17BP46990 184 aaKnown RBP9.03□□□□□ -0.96
NMD3YHR170W TSR3Q12094 313 aaKnown RBP8.92□□□□□ -0.98
NMD3YHR170W REB1P21538 810 aa8.88□□□□□ -0.99
NMD3YHR170W SPT21P35209 758 aa8.75□□□□□ -1.01
NMD3YHR170W RIM101P33400 625 aa8.61□□□□□ -1.03
NMD3YHR170W YCK3P39962 524 aa8.61□□□□□ -1.03
NMD3YHR170W HAA1Q12753 694 aaKnown RBP8.52□□□□□ -1.04
NMD3YHR170W MRPL32P25348 183 aa8.52□□□□□ -1.05
NMD3YHR170W YKR023WP36119 530 aaKnown RBP8.48□□□□□ -1.05
NMD3YHR170W OXP1P28273 1286 aa8.39□□□□□ -1.07
NMD3YHR170W CDC27P38042 758 aa8.31□□□□□ -1.08
NMD3YHR170W HOP09932 586 aa8.3□□□□□ -1.08
NMD3YHR170W TFC8Q12308 588 aa8.29□□□□□ -1.08
NMD3YHR170W PTP3P40048 928 aa8.27□□□□□ -1.09
NMD3YHR170W DCD1P06773 312 aa8.26□□□□□ -1.09
NMD3YHR170W SGS1P35187 1447 aa8.24□□□□□ -1.09
NMD3YHR170W YAH1Q12184 172 aaKnown RBP8.19□□□□□ -1.1
NMD3YHR170W SSP1P38871 571 aa8.18□□□□□ -1.1
NMD3YHR170W YIL055CP40523 627 aaKnown RBP8.16□□□□□ -1.1
NMD3YHR170W YLR271WQ06152 274 aa8.13□□□□□ -1.11
NMD3YHR170W MON2P48563 1636 aaPredicted RBP8.09□□□□□ -1.12
NMD3YHR170W RSM7P47150 247 aa8.07□□□□□ -1.12
NMD3YHR170W BCH2P36122 765 aa8.06□□□□□ -1.12
NMD3YHR170W INO80P53115 1489 aa8.06□□□□□ -1.12
NMD3YHR170W TCB3Q03640 1545 aaKnown RBP8.03□□□□□ -1.12
NMD3YHR170W TY1B-DR4Q07793 1604 aa8.02□□□□□ -1.13
NMD3YHR170W ARP8Q12386 881 aaKnown RBP RIP-Chip data8□□□□□ -1.13 RIP-Chip
NMD3YHR170W YGL015CP33199 130 aa7.95□□□□□ -1.14
NMD3YHR170W AI2P03876 854 aa7.94□□□□□ -1.14
NMD3YHR170W MAP2P38174 421 aaKnown RBP7.93□□□□□ -1.14
NMD3YHR170W RQC2Q12532 1038 aaKnown RBP7.93□□□□□ -1.14
NMD3YHR170W SCY1P53009 804 aa7.9□□□□□ -1.14
NMD3YHR170W PSD2P53037 1138 aaKnown RBP7.9□□□□□ -1.14
NMD3YHR170W EPS1P40557 701 aa7.89□□□□□ -1.15
NMD3YHR170W MGA2P40578 1113 aa7.89□□□□□ -1.15
NMD3YHR170W UBP10P53874 792 aaPredicted RBP7.89□□□□□ -1.15
NMD3YHR170W SWR1Q05471 1514 aa7.88□□□□□ -1.15
NMD3YHR170W CST9Q06032 482 aa7.88□□□□□ -1.15
NMD3YHR170W BDF1P35817 686 aa7.85□□□□□ -1.15
NMD3YHR170W BBC1P47068 1157 aa7.84□□□□□ -1.15
NMD3YHR170W HSL1P34244 1518 aa7.83□□□□□ -1.16
NMD3YHR170W SSN2P38931 1420 aa7.82□□□□□ -1.16
NMD3YHR170W DMA1P38823 416 aa7.8□□□□□ -1.16
NMD3YHR170W SPT6P23615 1451 aaKnown RBP7.8□□□□□ -1.16
NMD3YHR170W SPA2P23201 1466 aaKnown RBP7.77□□□□□ -1.16
NMD3YHR170W SLX5P32828 619 aaKnown RBP7.72□□□□□ -1.17
NMD3YHR170W DNA2P38859 1522 aa7.71□□□□□ -1.18
NMD3YHR170W MRM1P25270 412 aa7.7□□□□□ -1.18
NMD3YHR170W HIR3P47171 1648 aa7.69□□□□□ -1.18
NMD3YHR170W RCR1P38212 213 aa7.63□□□□□ -1.19
NMD3YHR170W KOG1P38873 1557 aa7.62□□□□□ -1.19
NMD3YHR170W XRN1P22147 1528 aaKnown RBP7.61□□□□□ -1.19
NMD3YHR170W RAM2P29703 316 aa7.59□□□□□ -1.2
NMD3YHR170W RTG3P38165 486 aa7.57□□□□□ -1.2
NMD3YHR170W VPS29P38759 282 aa7.55□□□□□ -1.2
NMD3YHR170W TAF7Q05021 590 aa7.55□□□□□ -1.2
NMD3YHR170W TIF4632P39936 914 aaKnown RBP7.53□□□□□ -1.2
NMD3YHR170W TGL3P40308 642 aa7.52□□□□□ -1.21
NMD3YHR170W REV3P14284 1504 aa7.5□□□□□ -1.21
NMD3YHR170W STS1P38637 319 aa7.44□□□□□ -1.22
NMD3YHR170W THO2P53552 1597 aaKnown RBP7.44□□□□□ -1.22
NMD3YHR170W TAF2P23255 1407 aa7.43□□□□□ -1.22
NMD3YHR170W YMR1P47147 688 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
NMD3YHR170W ECM5Q03214 1411 aa7.43□□□□□ -1.22
NMD3YHR170W BUD4P47136 1447 aa7.42□□□□□ -1.22
NMD3YHR170W MAK11P20484 414 aaKnown RBP7.42□□□□□ -1.22
NMD3YHR170W BUD31P25337 157 aaPredicted RBP7.42□□□□□ -1.22
NMD3YHR170W NSR1P27476 414 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
NMD3YHR170W SIN3P22579 1536 aa7.42□□□□□ -1.22
NMD3YHR170W DBP1P24784 617 aaKnown RBP7.41□□□□□ -1.22
NMD3YHR170W YFR006WP43590 535 aa7.41□□□□□ -1.22
NMD3YHR170W YOR238WQ08634 303 aa7.41□□□□□ -1.22
NMD3YHR170W SAS10Q12136 610 aaPredicted RBP7.4□□□□□ -1.22
NMD3YHR170W SSK2P53599 1579 aa7.39□□□□□ -1.23
NMD3YHR170W YAP5P40574 245 aa7.38□□□□□ -1.23
NMD3YHR170W ATG2P53855 1592 aa7.38□□□□□ -1.23
NMD3YHR170W SET1P38827 1080 aaKnown RBP7.37□□□□□ -1.23
NMD3YHR170W PIB1Q06651 286 aa7.37□□□□□ -1.23
NMD3YHR170W ESP1Q03018 1630 aa7.36□□□□□ -1.23
NMD3YHR170W MST1P07236 462 aa7.34□□□□□ -1.23
NMD3YHR170W COQ8P27697 501 aa7.33□□□□□ -1.24
NMD3YHR170W MDS3P53094 1487 aa7.33□□□□□ -1.24
NMD3YHR170W PEP1P32319 1579 aa7.32□□□□□ -1.24
NMD3YHR170W EDS1P38073 919 aa7.32□□□□□ -1.24
NMD3YHR170W SKI3P17883 1432 aaKnown RBP7.3□□□□□ -1.24
NMD3YHR170W MIF2P35201 549 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms