RNA–Protein interactions for RNA: YHR064C

SSZ1, Transcript of Hsp70 protein that interacts with Zuo1p (a DnaJ homolog), yeastyeast

Gene SSZ1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSZ1YHR064C FAP1P53971 965 aa10.33□□□□□ -0.76
SSZ1YHR064C MTC1P47018 478 aaKnown RBP10.14□□□□□ -0.79
SSZ1YHR064C DRS1P32892 752 aaKnown RBP9.96□□□□□ -0.82
SSZ1YHR064C PRY3P47033 881 aa9.78□□□□□ -0.84
SSZ1YHR064C YCK3P39962 524 aa9.28□□□□□ -0.92
SSZ1YHR064C AAD16Q02895 342 aa9.23□□□□□ -0.93
SSZ1YHR064C PRI1P10363 409 aa9.17□□□□□ -0.94
SSZ1YHR064C HAA1Q12753 694 aaKnown RBP9.09□□□□□ -0.95
SSZ1YHR064C BFR2Q06631 534 aaKnown RBP8.91□□□□□ -0.98
SSZ1YHR064C SGS1P35187 1447 aa8.8□□□□□ -1
SSZ1YHR064C TFA1P36100 482 aa8.78□□□□□ -1
SSZ1YHR064C SPA2P23201 1466 aaKnown RBP8.67□□□□□ -1.02
SSZ1YHR064C TSR3Q12094 313 aaKnown RBP8.62□□□□□ -1.03
SSZ1YHR064C ISW2Q08773 1120 aa8.61□□□□□ -1.03
SSZ1YHR064C RPG1P38249 964 aaKnown RBP8.58□□□□□ -1.04
SSZ1YHR064C INO80P53115 1489 aa8.57□□□□□ -1.04
SSZ1YHR064C SSN2P38931 1420 aa8.54□□□□□ -1.04
SSZ1YHR064C TCB3Q03640 1545 aaKnown RBP8.29□□□□□ -1.08
SSZ1YHR064C AVT3P36062 692 aa8.27□□□□□ -1.09
SSZ1YHR064C DIP2Q12220 943 aaPredicted RBP8.25□□□□□ -1.09
SSZ1YHR064C RQC2Q12532 1038 aaKnown RBP8.25□□□□□ -1.09
SSZ1YHR064C MRPL32P25348 183 aa8.24□□□□□ -1.09
SSZ1YHR064C YGL015CP33199 130 aa8.21□□□□□ -1.1
SSZ1YHR064C TY1B-DR4Q07793 1604 aa8.08□□□□□ -1.12
SSZ1YHR064C MON2P48563 1636 aaPredicted RBP8.07□□□□□ -1.12
SSZ1YHR064C SKI3P17883 1432 aaKnown RBP8.07□□□□□ -1.12
SSZ1YHR064C BUD31P25337 157 aaPredicted RBP8.03□□□□□ -1.12
SSZ1YHR064C HSL1P34244 1518 aa8□□□□□ -1.13
SSZ1YHR064C SPT6P23615 1451 aaKnown RBP7.98□□□□□ -1.13
SSZ1YHR064C CHD1P32657 1468 aa7.91□□□□□ -1.14
SSZ1YHR064C XRN1P22147 1528 aaKnown RBP7.89□□□□□ -1.15
SSZ1YHR064C HIR3P47171 1648 aa7.89□□□□□ -1.15
SSZ1YHR064C MMS22Q06164 1454 aa7.81□□□□□ -1.16
SSZ1YHR064C SIN3P22579 1536 aa7.8□□□□□ -1.16
SSZ1YHR064C REV3P14284 1504 aa7.79□□□□□ -1.16
SSZ1YHR064C THO2P53552 1597 aaKnown RBP7.79□□□□□ -1.16
SSZ1YHR064C RSE1Q04693 1361 aaKnown RBP7.76□□□□□ -1.17
SSZ1YHR064C SWR1Q05471 1514 aa7.75□□□□□ -1.17
SSZ1YHR064C SSK2P53599 1579 aa7.74□□□□□ -1.17
SSZ1YHR064C YTA7P40340 1379 aa7.7□□□□□ -1.18
SSZ1YHR064C TAF2P23255 1407 aa7.69□□□□□ -1.18
SSZ1YHR064C CDC27P38042 758 aa7.69□□□□□ -1.18
SSZ1YHR064C MYO2P19524 1574 aaKnown RBP7.67□□□□□ -1.18
SSZ1YHR064C POL1P13382 1468 aa7.66□□□□□ -1.18
SSZ1YHR064C DNA2P38859 1522 aa7.66□□□□□ -1.18
SSZ1YHR064C REB1P21538 810 aa7.65□□□□□ -1.18
SSZ1YHR064C STU1P38198 1513 aa7.65□□□□□ -1.18
SSZ1YHR064C ESP1Q03018 1630 aa7.63□□□□□ -1.19
SSZ1YHR064C RPL17AP05740 184 aaKnown RBP7.6□□□□□ -1.19
SSZ1YHR064C RPL17BP46990 184 aaKnown RBP7.6□□□□□ -1.19
SSZ1YHR064C UFD4P33202 1483 aa7.59□□□□□ -1.19
SSZ1YHR064C TAF7Q05021 590 aa7.58□□□□□ -1.2
SSZ1YHR064C BUD4P47136 1447 aa7.57□□□□□ -1.2
SSZ1YHR064C IKI3Q06706 1349 aaKnown RBP7.57□□□□□ -1.2
SSZ1YHR064C YPK9Q12697 1472 aa7.57□□□□□ -1.2
SSZ1YHR064C ECM5Q03214 1411 aa7.57□□□□□ -1.2
SSZ1YHR064C MAP2P38174 421 aaKnown RBP7.56□□□□□ -1.2
SSZ1YHR064C UBP10P53874 792 aaPredicted RBP7.56□□□□□ -1.2
SSZ1YHR064C SAS10Q12136 610 aaPredicted RBP7.56□□□□□ -1.2
SSZ1YHR064C TRM732Q03496 1420 aa7.53□□□□□ -1.2
SSZ1YHR064C MYO4P32492 1471 aa7.52□□□□□ -1.21
SSZ1YHR064C SIS1P25294 352 aaKnown RBP7.52□□□□□ -1.21
SSZ1YHR064C DMA1P38823 416 aa7.52□□□□□ -1.21
SSZ1YHR064C YOR1P53049 1477 aa7.5□□□□□ -1.21
SSZ1YHR064C SPP41P38904 1435 aa7.5□□□□□ -1.21
SSZ1YHR064C BPT1P14772 1559 aa7.48□□□□□ -1.21
SSZ1YHR064C ATG2P53855 1592 aa7.48□□□□□ -1.21
SSZ1YHR064C SCC2Q04002 1493 aa7.47□□□□□ -1.21
SSZ1YHR064C KOG1P38873 1557 aa7.46□□□□□ -1.21
SSZ1YHR064C SMC4Q12267 1418 aa7.46□□□□□ -1.21
SSZ1YHR064C NOP2P40991 618 aaKnown RBP7.46□□□□□ -1.21
SSZ1YHR064C RKR1Q04781 1562 aa7.46□□□□□ -1.22
SSZ1YHR064C NSR1P27476 414 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
SSZ1YHR064C RPO31P04051 1460 aa7.45□□□□□ -1.22
SSZ1YHR064C TOP2P06786 1428 aaKnown RBP7.44□□□□□ -1.22
SSZ1YHR064C NUP170P38181 1502 aa7.43□□□□□ -1.22
SSZ1YHR064C STH1P32597 1359 aa7.41□□□□□ -1.22
SSZ1YHR064C YKR023WP36119 530 aaKnown RBP7.4□□□□□ -1.22
SSZ1YHR064C SNQ2P32568 1501 aaKnown RBP7.39□□□□□ -1.23
SSZ1YHR064C SSM4P40318 1319 aa7.38□□□□□ -1.23
SSZ1YHR064C PEP1P32319 1579 aa7.37□□□□□ -1.23
SSZ1YHR064C YCF1P39109 1515 aaKnown RBP7.35□□□□□ -1.23
SSZ1YHR064C ENP1P38333 483 aaKnown RBP7.34□□□□□ -1.24
SSZ1YHR064C UBP9P39967 754 aa7.34□□□□□ -1.24
SSZ1YHR064C POL5P39985 1022 aaKnown RBP7.34□□□□□ -1.24
SSZ1YHR064C GEA1P47102 1408 aaPredicted RBP7.32□□□□□ -1.24
SSZ1YHR064C PAN1P32521 1480 aa7.31□□□□□ -1.24
SSZ1YHR064C MDS3P53094 1487 aa7.31□□□□□ -1.24
SSZ1YHR064C PTP3P40048 928 aa7.3□□□□□ -1.24
SSZ1YHR064C TSC11P40061 1430 aa7.29□□□□□ -1.24
SSZ1YHR064C IFH1P39520 1085 aa7.29□□□□□ -1.24
SSZ1YHR064C SEC3P33332 1336 aaKnown RBP7.28□□□□□ -1.24
SSZ1YHR064C PDR15Q04182 1529 aaKnown RBP7.27□□□□□ -1.24
SSZ1YHR064C MLP2P40457 1679 aa7.26□□□□□ -1.25
SSZ1YHR064C DCD1P06773 312 aa7.25□□□□□ -1.25
SSZ1YHR064C TGL3P40308 642 aa7.25□□□□□ -1.25
SSZ1YHR064C TY1B-DR3Q99231 1755 aa7.24□□□□□ -1.25
SSZ1YHR064C HOP09932 586 aa7.24□□□□□ -1.25
SSZ1YHR064C TIF4632P39936 914 aaKnown RBP7.24□□□□□ -1.25
SSZ1YHR064C TFC8Q12308 588 aa7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms