RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeastyeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRM3YHR031C FAP1P53971 965 aa7.92□□□□□ -1.14
RRM3YHR031C MTC1P47018 478 aaKnown RBP7.84□□□□□ -1.15
RRM3YHR031C PRY3P47033 881 aa7.47□□□□□ -1.21
RRM3YHR031C AAD16Q02895 342 aa7.1□□□□□ -1.27
RRM3YHR031C PRI1P10363 409 aa7.05□□□□□ -1.28
RRM3YHR031C YCK3P39962 524 aa7.04□□□□□ -1.28
RRM3YHR031C HAA1Q12753 694 aaKnown RBP7□□□□□ -1.29
RRM3YHR031C ISW2Q08773 1120 aa6.67□□□□□ -1.34
RRM3YHR031C RPG1P38249 964 aaKnown RBP6.6□□□□□ -1.35
RRM3YHR031C TSR3Q12094 313 aaKnown RBP6.59□□□□□ -1.35
RRM3YHR031C DRS1P32892 752 aaKnown RBP6.49□□□□□ -1.37
RRM3YHR031C MRPL32P25348 183 aa6.35□□□□□ -1.39
RRM3YHR031C YGL015CP33199 130 aa6.33□□□□□ -1.4
RRM3YHR031C BUD31P25337 157 aaPredicted RBP6.17□□□□□ -1.42
RRM3YHR031C RSE1Q04693 1361 aaKnown RBP6.02□□□□□ -1.45
RRM3YHR031C DIP2Q12220 943 aaPredicted RBP5.99□□□□□ -1.45
RRM3YHR031C REB1P21538 810 aa5.92□□□□□ -1.46
RRM3YHR031C CDC27P38042 758 aa5.89□□□□□ -1.47
RRM3YHR031C UBP10P53874 792 aaPredicted RBP5.87□□□□□ -1.47
RRM3YHR031C RPL17AP05740 184 aaKnown RBP5.86□□□□□ -1.47
RRM3YHR031C RPL17BP46990 184 aaKnown RBP5.86□□□□□ -1.47
RRM3YHR031C MAP2P38174 421 aaKnown RBP5.8□□□□□ -1.48
RRM3YHR031C SIS1P25294 352 aaKnown RBP5.77□□□□□ -1.49
RRM3YHR031C YKR023WP36119 530 aaKnown RBP5.69□□□□□ -1.5
RRM3YHR031C UBP9P39967 754 aa5.69□□□□□ -1.5
RRM3YHR031C TIF4632P39936 914 aaKnown RBP5.63□□□□□ -1.51
RRM3YHR031C TGL3P40308 642 aa5.62□□□□□ -1.51
RRM3YHR031C SPT21P35209 758 aa5.58□□□□□ -1.52
RRM3YHR031C TFC8Q12308 588 aa5.58□□□□□ -1.52
RRM3YHR031C AVT3P36062 692 aa5.56□□□□□ -1.52
RRM3YHR031C HOP09932 586 aa5.55□□□□□ -1.52
RRM3YHR031C DCD1P06773 312 aa5.54□□□□□ -1.52
RRM3YHR031C SLX5P32828 619 aaKnown RBP5.53□□□□□ -1.52
RRM3YHR031C SCY1P53009 804 aa5.53□□□□□ -1.52
RRM3YHR031C BFR2Q06631 534 aaKnown RBP5.41□□□□□ -1.54
RRM3YHR031C BCH2P36122 765 aa5.35□□□□□ -1.55
RRM3YHR031C MST1P07236 462 aa5.31□□□□□ -1.56
RRM3YHR031C YBL029C-AQ3E756 94 aa5.31□□□□□ -1.56
RRM3YHR031C TFA1P36100 482 aa5.26□□□□□ -1.57
RRM3YHR031C VNX1P42839 908 aa5.22□□□□□ -1.57
RRM3YHR031C YOR238WQ08634 303 aa5.22□□□□□ -1.57
RRM3YHR031C RIM101P33400 625 aa5.21□□□□□ -1.58
RRM3YHR031C NSR1P27476 414 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
RRM3YHR031C BDF1P35817 686 aa5.17□□□□□ -1.58
RRM3YHR031C EPS1P40557 701 aa5.16□□□□□ -1.58
RRM3YHR031C SPP1Q03012 353 aa5.16□□□□□ -1.58
RRM3YHR031C AIR2Q12476 344 aaKnown RBP5.16□□□□□ -1.58
RRM3YHR031C YJL171CP46992 396 aa5.15□□□□□ -1.58
RRM3YHR031C FKH1P40466 484 aa5.13□□□□□ -1.59
RRM3YHR031C TIF11P38912 153 aaKnown RBP5.08□□□□□ -1.6
RRM3YHR031C YAP5P40574 245 aa5.08□□□□□ -1.6
RRM3YHR031C WSC3Q12215 556 aa5.08□□□□□ -1.6
RRM3YHR031C BMT6Q12291 365 aa5.02□□□□□ -1.61
RRM3YHR031C LDB19Q12502 818 aa5□□□□□ -1.61
RRM3YHR031C OXP1P28273 1286 aa4.98□□□□□ -1.61
RRM3YHR031C GTT3P39996 337 aa4.98□□□□□ -1.61
RRM3YHR031C IOC2Q12072 812 aa4.97□□□□□ -1.61
RRM3YHR031C RQC2Q12532 1038 aaKnown RBP4.97□□□□□ -1.61
RRM3YHR031C ULI1P43604 169 aa4.95□□□□□ -1.62
RRM3YHR031C BBC1P47068 1157 aa4.95□□□□□ -1.62
RRM3YHR031C PTP3P40048 928 aa4.94□□□□□ -1.62
RRM3YHR031C YIL055CP40523 627 aaKnown RBP4.91□□□□□ -1.62
RRM3YHR031C AI2P03876 854 aa4.87□□□□□ -1.63
RRM3YHR031C MSB4Q12317 492 aa4.87□□□□□ -1.63
RRM3YHR031C EAP1P36041 632 aaKnown RBP4.85□□□□□ -1.63
RRM3YHR031C RSM7P47150 247 aa4.85□□□□□ -1.63
RRM3YHR031C RTG1P32607 177 aa4.83□□□□□ -1.64
RRM3YHR031C NCR1Q12200 1170 aa4.82□□□□□ -1.64
RRM3YHR031C TAF7Q05021 590 aa4.81□□□□□ -1.64
RRM3YHR031C PIB1Q06651 286 aa4.79□□□□□ -1.64
RRM3YHR031C TRP5P00931 707 aaKnown RBP4.78□□□□□ -1.64
RRM3YHR031C SEC61P32915 480 aa4.78□□□□□ -1.64
RRM3YHR031C BCK2P33306 851 aa4.77□□□□□ -1.65
RRM3YHR031C YNL035CP53962 389 aaKnown RBP4.77□□□□□ -1.65
RRM3YHR031C YOL036WQ08206 761 aa4.75□□□□□ -1.65
RRM3YHR031C SET4P42948 560 aa4.74□□□□□ -1.65
RRM3YHR031C TFG1P41895 735 aaPredicted RBP4.71□□□□□ -1.66
RRM3YHR031C CHL1P22516 861 aaPredicted RBP4.7□□□□□ -1.66
RRM3YHR031C YAH1Q12184 172 aaKnown RBP4.7□□□□□ -1.66
RRM3YHR031C RGA2Q06407 1009 aa4.7□□□□□ -1.66
RRM3YHR031C SAP30P38429 201 aa4.68□□□□□ -1.66
RRM3YHR031C PSD2P53037 1138 aaKnown RBP4.67□□□□□ -1.66
RRM3YHR031C PRE3P38624 215 aa4.65□□□□□ -1.66
RRM3YHR031C MRM1P25270 412 aa4.65□□□□□ -1.67
RRM3YHR031C DAN4P47179 1161 aa4.64□□□□□ -1.67
RRM3YHR031C YDL129WQ07555 291 aa4.64□□□□□ -1.67
RRM3YHR031C SAM3Q08986 587 aa4.64□□□□□ -1.67
RRM3YHR031C JIP4Q03361 876 aa4.64□□□□□ -1.67
RRM3YHR031C YMR1P47147 688 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
RRM3YHR031C VMA1P17255 1071 aaKnown RBP4.62□□□□□ -1.67
RRM3YHR031C YLR271WQ06152 274 aa4.62□□□□□ -1.67
RRM3YHR031C XDJ1P39102 459 aa4.61□□□□□ -1.67
RRM3YHR031C DBP1P24784 617 aaKnown RBP4.61□□□□□ -1.67
RRM3YHR031C ABP1P15891 592 aaKnown RBP4.58□□□□□ -1.68
RRM3YHR031C VPS29P38759 282 aa4.57□□□□□ -1.68
RRM3YHR031C VRP1P37370 817 aa4.56□□□□□ -1.68
RRM3YHR031C YFR006WP43590 535 aa4.56□□□□□ -1.68
RRM3YHR031C DPS1P04802 557 aaKnown RBP4.55□□□□□ -1.68
RRM3YHR031C STS1P38637 319 aa4.55□□□□□ -1.68
RRM3YHR031C RGA1P39083 1007 aa4.54□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms