RNA–Protein interactions for RNA: YHL038C

CBP2, Required for splicing of the group I intron bI5 of the COB pre-mRNA, yeastyeast

Gene CBP2, Length 1,893 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBP2YHL038C FAP1P53971 965 aa12.32□□□□□ -0.44
CBP2YHL038C MTC1P47018 478 aaKnown RBP11.83□□□□□ -0.52
CBP2YHL038C PRY3P47033 881 aa11.64□□□□□ -0.55
CBP2YHL038C AAD16Q02895 342 aa10.95□□□□□ -0.66
CBP2YHL038C YCK3P39962 524 aa10.93□□□□□ -0.66
CBP2YHL038C HAA1Q12753 694 aaKnown RBP10.87□□□□□ -0.67
CBP2YHL038C PRI1P10363 409 aa10.82□□□□□ -0.68
CBP2YHL038C ISW2Q08773 1120 aa10.15□□□□□ -0.78
CBP2YHL038C TSR3Q12094 313 aaKnown RBP10.13□□□□□ -0.79
CBP2YHL038C RPG1P38249 964 aaKnown RBP10.06□□□□□ -0.8
CBP2YHL038C YGL015CP33199 130 aa9.79□□□□□ -0.84
CBP2YHL038C MRPL32P25348 183 aa9.76□□□□□ -0.85
CBP2YHL038C BUD31P25337 157 aaPredicted RBP9.63□□□□□ -0.87
CBP2YHL038C DRS1P32892 752 aaKnown RBP9.53□□□□□ -0.88
CBP2YHL038C RSE1Q04693 1361 aaKnown RBP9.05□□□□□ -0.96
CBP2YHL038C SIS1P25294 352 aaKnown RBP9.02□□□□□ -0.96
CBP2YHL038C CDC27P38042 758 aa8.98□□□□□ -0.97
CBP2YHL038C UBP10P53874 792 aaPredicted RBP8.96□□□□□ -0.97
CBP2YHL038C REB1P21538 810 aa8.95□□□□□ -0.98
CBP2YHL038C DIP2Q12220 943 aaPredicted RBP8.91□□□□□ -0.98
CBP2YHL038C MAP2P38174 421 aaKnown RBP8.88□□□□□ -0.99
CBP2YHL038C RPL17AP05740 184 aaKnown RBP8.85□□□□□ -0.99
CBP2YHL038C RPL17BP46990 184 aaKnown RBP8.85□□□□□ -0.99
CBP2YHL038C UBP9P39967 754 aa8.8□□□□□ -1
CBP2YHL038C TIF4632P39936 914 aaKnown RBP8.61□□□□□ -1.03
CBP2YHL038C YKR023WP36119 530 aaKnown RBP8.6□□□□□ -1.03
CBP2YHL038C TGL3P40308 642 aa8.6□□□□□ -1.03
CBP2YHL038C SLX5P32828 619 aaKnown RBP8.43□□□□□ -1.06
CBP2YHL038C SCY1P53009 804 aa8.43□□□□□ -1.06
CBP2YHL038C TFC8Q12308 588 aa8.43□□□□□ -1.06
CBP2YHL038C DCD1P06773 312 aa8.4□□□□□ -1.06
CBP2YHL038C HOP09932 586 aa8.4□□□□□ -1.06
CBP2YHL038C SPT21P35209 758 aa8.35□□□□□ -1.07
CBP2YHL038C AVT3P36062 692 aa8.17□□□□□ -1.1
CBP2YHL038C YBL029C-AQ3E756 94 aa8.14□□□□□ -1.11
CBP2YHL038C BCH2P36122 765 aa8.09□□□□□ -1.12
CBP2YHL038C MST1P07236 462 aa8.06□□□□□ -1.12
CBP2YHL038C VNX1P42839 908 aa8□□□□□ -1.13
CBP2YHL038C YJL171CP46992 396 aa7.95□□□□□ -1.14
CBP2YHL038C YOR238WQ08634 303 aa7.95□□□□□ -1.14
CBP2YHL038C AIR2Q12476 344 aaKnown RBP7.93□□□□□ -1.14
CBP2YHL038C SPP1Q03012 353 aa7.92□□□□□ -1.14
CBP2YHL038C FKH1P40466 484 aa7.86□□□□□ -1.15
CBP2YHL038C BDF1P35817 686 aa7.79□□□□□ -1.16
CBP2YHL038C NSR1P27476 414 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
CBP2YHL038C EPS1P40557 701 aa7.79□□□□□ -1.16
CBP2YHL038C WSC3Q12215 556 aa7.78□□□□□ -1.16
CBP2YHL038C TIF11P38912 153 aaKnown RBP7.75□□□□□ -1.17
CBP2YHL038C RIM101P33400 625 aa7.74□□□□□ -1.17
CBP2YHL038C BMT6Q12291 365 aa7.71□□□□□ -1.18
CBP2YHL038C YAP5P40574 245 aa7.68□□□□□ -1.18
CBP2YHL038C LDB19Q12502 818 aa7.63□□□□□ -1.19
CBP2YHL038C GTT3P39996 337 aa7.56□□□□□ -1.2
CBP2YHL038C IOC2Q12072 812 aa7.55□□□□□ -1.2
CBP2YHL038C ULI1P43604 169 aa7.55□□□□□ -1.2
CBP2YHL038C OXP1P28273 1286 aa7.41□□□□□ -1.22
CBP2YHL038C BFR2Q06631 534 aaKnown RBP7.41□□□□□ -1.22
CBP2YHL038C BBC1P47068 1157 aa7.4□□□□□ -1.23
CBP2YHL038C PTP3P40048 928 aa7.37□□□□□ -1.23
CBP2YHL038C RTG1P32607 177 aa7.36□□□□□ -1.23
CBP2YHL038C NCR1Q12200 1170 aa7.35□□□□□ -1.23
CBP2YHL038C EAP1P36041 632 aaKnown RBP7.34□□□□□ -1.23
CBP2YHL038C MSB4Q12317 492 aa7.34□□□□□ -1.23
CBP2YHL038C RGA2Q06407 1009 aa7.34□□□□□ -1.23
CBP2YHL038C YIL055CP40523 627 aaKnown RBP7.32□□□□□ -1.24
CBP2YHL038C BCK2P33306 851 aa7.31□□□□□ -1.24
CBP2YHL038C AI2P03876 854 aa7.28□□□□□ -1.24
CBP2YHL038C SEC61P32915 480 aa7.26□□□□□ -1.25
CBP2YHL038C PIB1Q06651 286 aa7.26□□□□□ -1.25
CBP2YHL038C TRP5P00931 707 aaKnown RBP7.24□□□□□ -1.25
CBP2YHL038C YNL035CP53962 389 aaKnown RBP7.24□□□□□ -1.25
CBP2YHL038C RSM7P47150 247 aa7.22□□□□□ -1.25
CBP2YHL038C YOL036WQ08206 761 aa7.18□□□□□ -1.26
CBP2YHL038C SET4P42948 560 aa7.17□□□□□ -1.26
CBP2YHL038C TFA1P36100 482 aa7.16□□□□□ -1.26
CBP2YHL038C TFG1P41895 735 aaPredicted RBP7.16□□□□□ -1.26
CBP2YHL038C CHL1P22516 861 aaPredicted RBP7.15□□□□□ -1.26
CBP2YHL038C SAP30P38429 201 aa7.12□□□□□ -1.27
CBP2YHL038C PRE3P38624 215 aa7.08□□□□□ -1.28
CBP2YHL038C XDJ1P39102 459 aa7.05□□□□□ -1.28
CBP2YHL038C RGA1P39083 1007 aa7.04□□□□□ -1.28
CBP2YHL038C YDL129WQ07555 291 aa7.03□□□□□ -1.28
CBP2YHL038C DAN4P47179 1161 aa7.01□□□□□ -1.29
CBP2YHL038C JIP4Q03361 876 aa6.98□□□□□ -1.29
CBP2YHL038C YAH1Q12184 172 aaKnown RBP6.98□□□□□ -1.29
CBP2YHL038C DPS1P04802 557 aaKnown RBP6.97□□□□□ -1.29
CBP2YHL038C VRP1P37370 817 aa6.97□□□□□ -1.29
CBP2YHL038C SAM3Q08986 587 aa6.95□□□□□ -1.3
CBP2YHL038C VMA1P17255 1071 aaKnown RBP6.92□□□□□ -1.3
CBP2YHL038C MRM1P25270 412 aa6.92□□□□□ -1.3
CBP2YHL038C YMR1P47147 688 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
CBP2YHL038C PSD2P53037 1138 aaKnown RBP6.9□□□□□ -1.31
CBP2YHL038C DBP1P24784 617 aaKnown RBP6.89□□□□□ -1.31
CBP2YHL038C ABP1P15891 592 aaKnown RBP6.86□□□□□ -1.31
CBP2YHL038C YFR006WP43590 535 aa6.83□□□□□ -1.32
CBP2YHL038C SRC1Q03707 834 aa6.82□□□□□ -1.32
CBP2YHL038C PTC4P38089 393 aa6.81□□□□□ -1.32
CBP2YHL038C VPS29P38759 282 aa6.81□□□□□ -1.32
CBP2YHL038C YLR271WQ06152 274 aa6.81□□□□□ -1.32
CBP2YHL038C HTA1P04911 132 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms