RNA–Protein interactions for RNA: YGR252W

GCN5, Transcript of Catalytic subunit of ADA and SAGA histone acetyltransferase complexes, yeastyeast

Gene GCN5, Length 1,320 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCN5YGR252W MTC1P47018 478 aaKnown RBP17.27■□□□□ 0.36
GCN5YGR252W FAP1P53971 965 aa16.82■□□□□ 0.28
GCN5YGR252W PRY3P47033 881 aa15.86■□□□□ 0.13
GCN5YGR252W AAD16Q02895 342 aa15.25■□□□□ 0.03
GCN5YGR252W PRI1P10363 409 aa15.19■□□□□ 0.02
GCN5YGR252W DRS1P32892 752 aaKnown RBP15□□□□□ -0.01
GCN5YGR252W YCK3P39962 524 aa14.91□□□□□ -0.02
GCN5YGR252W HAA1Q12753 694 aaKnown RBP14.83□□□□□ -0.04
GCN5YGR252W ISW2Q08773 1120 aa14.58□□□□□ -0.08
GCN5YGR252W RPG1P38249 964 aaKnown RBP14.44□□□□□ -0.1
GCN5YGR252W TSR3Q12094 313 aaKnown RBP14.29□□□□□ -0.12
GCN5YGR252W MRPL32P25348 183 aa13.76□□□□□ -0.21
GCN5YGR252W DIP2Q12220 943 aaPredicted RBP13.57□□□□□ -0.24
GCN5YGR252W YGL015CP33199 130 aa13.5□□□□□ -0.25
GCN5YGR252W RSE1Q04693 1361 aaKnown RBP13.44□□□□□ -0.26
GCN5YGR252W REB1P21538 810 aa13.13□□□□□ -0.31
GCN5YGR252W RPL17AP05740 184 aaKnown RBP13.07□□□□□ -0.32
GCN5YGR252W RPL17BP46990 184 aaKnown RBP13.07□□□□□ -0.32
GCN5YGR252W BUD31P25337 157 aaPredicted RBP12.88□□□□□ -0.35
GCN5YGR252W CDC27P38042 758 aa12.85□□□□□ -0.35
GCN5YGR252W AVT3P36062 692 aa12.75□□□□□ -0.37
GCN5YGR252W UBP10P53874 792 aaPredicted RBP12.66□□□□□ -0.38
GCN5YGR252W MAP2P38174 421 aaKnown RBP12.59□□□□□ -0.39
GCN5YGR252W YKR023WP36119 530 aaKnown RBP12.54□□□□□ -0.4
GCN5YGR252W SPT21P35209 758 aa12.42□□□□□ -0.42
GCN5YGR252W HOP09932 586 aa12.29□□□□□ -0.44
GCN5YGR252W TFC8Q12308 588 aa12.29□□□□□ -0.44
GCN5YGR252W DCD1P06773 312 aa12.26□□□□□ -0.45
GCN5YGR252W SIS1P25294 352 aaKnown RBP12.15□□□□□ -0.46
GCN5YGR252W TIF4632P39936 914 aaKnown RBP12.15□□□□□ -0.46
GCN5YGR252W SCY1P53009 804 aa12.13□□□□□ -0.47
GCN5YGR252W TGL3P40308 642 aa12.11□□□□□ -0.47
GCN5YGR252W UBP9P39967 754 aa12.1□□□□□ -0.47
GCN5YGR252W SLX5P32828 619 aaKnown RBP12.06□□□□□ -0.48
GCN5YGR252W BFR2Q06631 534 aaKnown RBP11.94□□□□□ -0.5
GCN5YGR252W BCH2P36122 765 aa11.84□□□□□ -0.51
GCN5YGR252W RIM101P33400 625 aa11.74□□□□□ -0.53
GCN5YGR252W EPS1P40557 701 aa11.47□□□□□ -0.57
GCN5YGR252W MST1P07236 462 aa11.46□□□□□ -0.57
GCN5YGR252W YBL029C-AQ3E756 94 aa11.46□□□□□ -0.57
GCN5YGR252W BDF1P35817 686 aa11.45□□□□□ -0.58
GCN5YGR252W YOR238WQ08634 303 aa11.38□□□□□ -0.59
GCN5YGR252W OXP1P28273 1286 aa11.29□□□□□ -0.6
GCN5YGR252W VNX1P42839 908 aa11.28□□□□□ -0.6
GCN5YGR252W NSR1P27476 414 aaKnown RBP RIP-Chip data11.25□□□□□ -0.61not detected
GCN5YGR252W PTP3P40048 928 aa11.21□□□□□ -0.61
GCN5YGR252W SPP1Q03012 353 aa11.19□□□□□ -0.62
GCN5YGR252W YIL055CP40523 627 aaKnown RBP11.16□□□□□ -0.62
GCN5YGR252W YAP5P40574 245 aa11.15□□□□□ -0.62
GCN5YGR252W WSC3Q12215 556 aa11.11□□□□□ -0.63
GCN5YGR252W BBC1P47068 1157 aa11.09□□□□□ -0.63
GCN5YGR252W AIR2Q12476 344 aaKnown RBP11.07□□□□□ -0.64
GCN5YGR252W YJL171CP46992 396 aa11.03□□□□□ -0.64
GCN5YGR252W FKH1P40466 484 aa11.02□□□□□ -0.65
GCN5YGR252W TIF11P38912 153 aaKnown RBP11.01□□□□□ -0.65
GCN5YGR252W AI2P03876 854 aa10.99□□□□□ -0.65
GCN5YGR252W RSM7P47150 247 aa10.99□□□□□ -0.65
GCN5YGR252W GTT3P39996 337 aa10.94□□□□□ -0.66
GCN5YGR252W LDB19Q12502 818 aa10.84□□□□□ -0.67
GCN5YGR252W YAH1Q12184 172 aaKnown RBP10.83□□□□□ -0.68
GCN5YGR252W ULI1P43604 169 aa10.8□□□□□ -0.68
GCN5YGR252W BMT6Q12291 365 aa10.8□□□□□ -0.68
GCN5YGR252W IOC2Q12072 812 aa10.78□□□□□ -0.68
GCN5YGR252W PIB1Q06651 286 aa10.71□□□□□ -0.69
GCN5YGR252W MSB4Q12317 492 aa10.63□□□□□ -0.71
GCN5YGR252W EAP1P36041 632 aaKnown RBP10.6□□□□□ -0.71
GCN5YGR252W YLR271WQ06152 274 aa10.59□□□□□ -0.71
GCN5YGR252W PSD2P53037 1138 aaKnown RBP10.58□□□□□ -0.71
GCN5YGR252W RTG1P32607 177 aa10.56□□□□□ -0.72
GCN5YGR252W MRM1P25270 412 aa10.53□□□□□ -0.72
GCN5YGR252W SET4P42948 560 aa10.51□□□□□ -0.73
GCN5YGR252W YOL036WQ08206 761 aa10.51□□□□□ -0.73
GCN5YGR252W NCR1Q12200 1170 aa10.51□□□□□ -0.73
GCN5YGR252W TRP5P00931 707 aaKnown RBP10.5□□□□□ -0.73
GCN5YGR252W SEC61P32915 480 aa10.43□□□□□ -0.74
GCN5YGR252W YNL035CP53962 389 aaKnown RBP10.43□□□□□ -0.74
GCN5YGR252W YMR1P47147 688 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
GCN5YGR252W DBP1P24784 617 aaKnown RBP10.34□□□□□ -0.75
GCN5YGR252W VMA1P17255 1071 aaKnown RBP10.32□□□□□ -0.76
GCN5YGR252W TFG1P41895 735 aaPredicted RBP10.32□□□□□ -0.76
GCN5YGR252W VPS29P38759 282 aa10.31□□□□□ -0.76
GCN5YGR252W YFR006WP43590 535 aa10.3□□□□□ -0.76
GCN5YGR252W SAM3Q08986 587 aa10.29□□□□□ -0.76
GCN5YGR252W BCK2P33306 851 aa10.26□□□□□ -0.77
GCN5YGR252W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
GCN5YGR252W TFA1P36100 482 aa10.25□□□□□ -0.77
GCN5YGR252W SAP30P38429 201 aa10.25□□□□□ -0.77
GCN5YGR252W STS1P38637 319 aa10.24□□□□□ -0.77
GCN5YGR252W RTG3P38165 486 aa10.23□□□□□ -0.77
GCN5YGR252W DAN4P47179 1161 aa10.21□□□□□ -0.78
GCN5YGR252W JIP4Q03361 876 aa10.19□□□□□ -0.78
GCN5YGR252W CHL1P22516 861 aaPredicted RBP10.18□□□□□ -0.78
GCN5YGR252W SSP1P38871 571 aa10.17□□□□□ -0.78
GCN5YGR252W YDL129WQ07555 291 aa10.17□□□□□ -0.78
GCN5YGR252W ABP1P15891 592 aaKnown RBP10.15□□□□□ -0.78
GCN5YGR252W CST9Q06032 482 aa10.15□□□□□ -0.78
GCN5YGR252W PRE3P38624 215 aa10.12□□□□□ -0.79
GCN5YGR252W GYP5Q12344 894 aa10.1□□□□□ -0.79
GCN5YGR252W HTA1P04911 132 aaKnown RBP10.07□□□□□ -0.8
GCN5YGR252W HTA2P04912 132 aa10.07□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms