RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W MTC1P47018 478 aaKnown RBP4.23□□□□□ -1.73
CSE1YGL238W FAP1P53971 965 aa4.14□□□□□ -1.75
CSE1YGL238W PRY3P47033 881 aa3.9□□□□□ -1.78
CSE1YGL238W AAD16Q02895 342 aa3.77□□□□□ -1.81
CSE1YGL238W PRI1P10363 409 aa3.75□□□□□ -1.81
CSE1YGL238W YCK3P39962 524 aa3.69□□□□□ -1.82
CSE1YGL238W HAA1Q12753 694 aaKnown RBP3.67□□□□□ -1.82
CSE1YGL238W DRS1P32892 752 aaKnown RBP3.64□□□□□ -1.83
CSE1YGL238W ISW2Q08773 1120 aa3.58□□□□□ -1.84
CSE1YGL238W RPG1P38249 964 aaKnown RBP3.55□□□□□ -1.84
CSE1YGL238W TSR3Q12094 313 aaKnown RBP3.52□□□□□ -1.85
CSE1YGL238W MRPL32P25348 183 aa3.39□□□□□ -1.87
CSE1YGL238W YGL015CP33199 130 aa3.35□□□□□ -1.87
CSE1YGL238W DIP2Q12220 943 aaPredicted RBP3.32□□□□□ -1.88
CSE1YGL238W RSE1Q04693 1361 aaKnown RBP3.29□□□□□ -1.88
CSE1YGL238W REB1P21538 810 aa3.21□□□□□ -1.9
CSE1YGL238W BUD31P25337 157 aaPredicted RBP3.2□□□□□ -1.9
CSE1YGL238W RPL17AP05740 184 aaKnown RBP3.19□□□□□ -1.9
CSE1YGL238W RPL17BP46990 184 aaKnown RBP3.19□□□□□ -1.9
CSE1YGL238W CDC27P38042 758 aa3.16□□□□□ -1.9
CSE1YGL238W UBP10P53874 792 aaPredicted RBP3.12□□□□□ -1.91
CSE1YGL238W AVT3P36062 692 aa3.11□□□□□ -1.91
CSE1YGL238W MAP2P38174 421 aaKnown RBP3.09□□□□□ -1.91
CSE1YGL238W YKR023WP36119 530 aaKnown RBP3.09□□□□□ -1.92
CSE1YGL238W SPT21P35209 758 aa3.04□□□□□ -1.92
CSE1YGL238W TFC8Q12308 588 aa3.02□□□□□ -1.93
CSE1YGL238W HOP09932 586 aa3.01□□□□□ -1.93
CSE1YGL238W SIS1P25294 352 aaKnown RBP3.01□□□□□ -1.93
CSE1YGL238W TGL3P40308 642 aa3□□□□□ -1.93
CSE1YGL238W DCD1P06773 312 aa2.99□□□□□ -1.93
CSE1YGL238W TIF4632P39936 914 aaKnown RBP2.99□□□□□ -1.93
CSE1YGL238W UBP9P39967 754 aa2.99□□□□□ -1.93
CSE1YGL238W SCY1P53009 804 aa2.98□□□□□ -1.93
CSE1YGL238W SLX5P32828 619 aaKnown RBP2.96□□□□□ -1.94
CSE1YGL238W BCH2P36122 765 aa2.91□□□□□ -1.94
CSE1YGL238W RIM101P33400 625 aa2.88□□□□□ -1.95
CSE1YGL238W BFR2Q06631 534 aaKnown RBP2.87□□□□□ -1.95
CSE1YGL238W MST1P07236 462 aa2.85□□□□□ -1.95
CSE1YGL238W YBL029C-AQ3E756 94 aa2.82□□□□□ -1.96
CSE1YGL238W BDF1P35817 686 aa2.81□□□□□ -1.96
CSE1YGL238W EPS1P40557 701 aa2.81□□□□□ -1.96
CSE1YGL238W YOR238WQ08634 303 aa2.8□□□□□ -1.96
CSE1YGL238W VNX1P42839 908 aa2.79□□□□□ -1.96
CSE1YGL238W NSR1P27476 414 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
CSE1YGL238W OXP1P28273 1286 aa2.77□□□□□ -1.97
CSE1YGL238W SPP1Q03012 353 aa2.76□□□□□ -1.97
CSE1YGL238W YAP5P40574 245 aa2.74□□□□□ -1.97
CSE1YGL238W AIR2Q12476 344 aaKnown RBP2.74□□□□□ -1.97
CSE1YGL238W YIL055CP40523 627 aaKnown RBP2.73□□□□□ -1.97
CSE1YGL238W PTP3P40048 928 aa2.72□□□□□ -1.97
CSE1YGL238W YJL171CP46992 396 aa2.72□□□□□ -1.97
CSE1YGL238W WSC3Q12215 556 aa2.72□□□□□ -1.97
CSE1YGL238W TIF11P38912 153 aaKnown RBP2.71□□□□□ -1.97
CSE1YGL238W FKH1P40466 484 aa2.71□□□□□ -1.98
CSE1YGL238W BBC1P47068 1157 aa2.71□□□□□ -1.98
CSE1YGL238W RSM7P47150 247 aa2.69□□□□□ -1.98
CSE1YGL238W AI2P03876 854 aa2.69□□□□□ -1.98
CSE1YGL238W GTT3P39996 337 aa2.67□□□□□ -1.98
CSE1YGL238W IOC2Q12072 812 aa2.67□□□□□ -1.98
CSE1YGL238W LDB19Q12502 818 aa2.67□□□□□ -1.98
CSE1YGL238W ULI1P43604 169 aa2.66□□□□□ -1.98
CSE1YGL238W BMT6Q12291 365 aa2.66□□□□□ -1.98
CSE1YGL238W YAH1Q12184 172 aaKnown RBP2.62□□□□□ -1.99
CSE1YGL238W EAP1P36041 632 aaKnown RBP2.62□□□□□ -1.99
CSE1YGL238W MSB4Q12317 492 aa2.62□□□□□ -1.99
CSE1YGL238W PIB1Q06651 286 aa2.61□□□□□ -1.99
CSE1YGL238W RTG1P32607 177 aa2.6□□□□□ -1.99
CSE1YGL238W NCR1Q12200 1170 aa2.6□□□□□ -1.99
CSE1YGL238W PSD2P53037 1138 aaKnown RBP2.59□□□□□ -2
CSE1YGL238W YLR271WQ06152 274 aa2.59□□□□□ -2
CSE1YGL238W TRP5P00931 707 aaKnown RBP2.58□□□□□ -2
CSE1YGL238W SEC61P32915 480 aa2.58□□□□□ -2
CSE1YGL238W YNL035CP53962 389 aaKnown RBP2.57□□□□□ -2
CSE1YGL238W MRM1P25270 412 aa2.57□□□□□ -2
CSE1YGL238W SET4P42948 560 aa2.57□□□□□ -2
CSE1YGL238W YOL036WQ08206 761 aa2.57□□□□□ -2
CSE1YGL238W YMR1P47147 688 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
CSE1YGL238W TFG1P41895 735 aaPredicted RBP2.54□□□□□ -2
CSE1YGL238W SAM3Q08986 587 aa2.54□□□□□ -2
CSE1YGL238W DBP1P24784 617 aaKnown RBP2.53□□□□□ -2
CSE1YGL238W VPS29P38759 282 aa2.53□□□□□ -2
CSE1YGL238W BCK2P33306 851 aa2.53□□□□□ -2
CSE1YGL238W VMA1P17255 1071 aaKnown RBP2.52□□□□□ -2.01
CSE1YGL238W DAN4P47179 1161 aa2.52□□□□□ -2.01
CSE1YGL238W CHL1P22516 861 aaPredicted RBP2.52□□□□□ -2.01
CSE1YGL238W SAP30P38429 201 aa2.51□□□□□ -2.01
CSE1YGL238W JIP4Q03361 876 aa2.51□□□□□ -2.01
CSE1YGL238W YFR006WP43590 535 aa2.51□□□□□ -2.01
CSE1YGL238W RTG3P38165 486 aa2.51□□□□□ -2.01
CSE1YGL238W STS1P38637 319 aa2.5□□□□□ -2.01
CSE1YGL238W YDL129WQ07555 291 aa2.5□□□□□ -2.01
CSE1YGL238W PRE3P38624 215 aa2.5□□□□□ -2.01
CSE1YGL238W ABP1P15891 592 aaKnown RBP2.49□□□□□ -2.01
CSE1YGL238W TFA1P36100 482 aa2.49□□□□□ -2.01
CSE1YGL238W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
CSE1YGL238W PTC4P38089 393 aa2.48□□□□□ -2.01
CSE1YGL238W GYP5Q12344 894 aa2.48□□□□□ -2.01
CSE1YGL238W SSP1P38871 571 aa2.47□□□□□ -2.01
CSE1YGL238W HTA1P04911 132 aaKnown RBP2.47□□□□□ -2.01
CSE1YGL238W HTA2P04912 132 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms