RNA–Protein interactions for RNA: YGL089C

MF(ALPHA)2, Transcript of Mating pheromone alpha-factor, made by alpha cells, yeast

Gene MF(ALPHA)2, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MF(ALPHA)2	YGL089C	MTC1	P47018	478 aa	Known RBP	13.6	□□□□□ -0.23
MF(ALPHA)2	YGL089C	DRS1	P32892	752 aa	Known RBP	13.5	□□□□□ -0.25
MF(ALPHA)2	YGL089C	BFR2	Q06631	534 aa	Known RBP	11.57	□□□□□ -0.56
MF(ALPHA)2	YGL089C	DIP2	Q12220	943 aa	Predicted RBP	11.55	□□□□□ -0.56
MF(ALPHA)2	YGL089C	FAP1	P53971	965 aa		11.5	□□□□□ -0.57
MF(ALPHA)2	YGL089C	AVT3	P36062	692 aa		11.3	□□□□□ -0.6
MF(ALPHA)2	YGL089C	ISW2	Q08773	1120 aa		11.15	□□□□□ -0.62
MF(ALPHA)2	YGL089C	PRI1	P10363	409 aa		11.05	□□□□□ -0.64
MF(ALPHA)2	YGL089C	RPG1	P38249	964 aa	Known RBP	11.02	□□□□□ -0.65
MF(ALPHA)2	YGL089C	RSE1	Q04693	1361 aa	Known RBP	10.96	□□□□□ -0.65
MF(ALPHA)2	YGL089C	AAD16	Q02895	342 aa		10.9	□□□□□ -0.66
MF(ALPHA)2	YGL089C	PRY3	P47033	881 aa		10.75	□□□□□ -0.69
MF(ALPHA)2	YGL089C	TFA1	P36100	482 aa		10.68	□□□□□ -0.7
MF(ALPHA)2	YGL089C	RPL17A	P05740	184 aa	Known RBP	10.57	□□□□□ -0.72
MF(ALPHA)2	YGL089C	RPL17B	P46990	184 aa	Known RBP	10.57	□□□□□ -0.72
MF(ALPHA)2	YGL089C	TSR3	Q12094	313 aa	Known RBP	10.52	□□□□□ -0.73
MF(ALPHA)2	YGL089C	REB1	P21538	810 aa		10.48	□□□□□ -0.73
MF(ALPHA)2	YGL089C	MRPL32	P25348	183 aa		10.11	□□□□□ -0.79
MF(ALPHA)2	YGL089C	SPT21	P35209	758 aa		10.1	□□□□□ -0.79
MF(ALPHA)2	YGL089C	YCK3	P39962	524 aa		10.08	□□□□□ -0.8
MF(ALPHA)2	YGL089C	HAA1	Q12753	694 aa	Known RBP	10.08	□□□□□ -0.8
MF(ALPHA)2	YGL089C	RIM101	P33400	625 aa		9.93	□□□□□ -0.82
MF(ALPHA)2	YGL089C	YKR023W	P36119	530 aa	Known RBP	9.85	□□□□□ -0.83
MF(ALPHA)2	YGL089C	HO	P09932	586 aa		9.7	□□□□□ -0.86
MF(ALPHA)2	YGL089C	CDC27	P38042	758 aa		9.7	□□□□□ -0.86
MF(ALPHA)2	YGL089C	TFC8	Q12308	588 aa		9.65	□□□□□ -0.86
MF(ALPHA)2	YGL089C	DCD1	P06773	312 aa		9.64	□□□□□ -0.87
MF(ALPHA)2	YGL089C	OXP1	P28273	1286 aa		9.63	□□□□□ -0.87
MF(ALPHA)2	YGL089C	YIL055C	P40523	627 aa	Known RBP	9.56	□□□□□ -0.88
MF(ALPHA)2	YGL089C	PTP3	P40048	928 aa		9.54	□□□□□ -0.88
MF(ALPHA)2	YGL089C	YAH1	Q12184	172 aa	Known RBP	9.53	□□□□□ -0.88
MF(ALPHA)2	YGL089C	YGL015C	P33199	130 aa		9.48	□□□□□ -0.89
MF(ALPHA)2	YGL089C	SSP1	P38871	571 aa		9.42	□□□□□ -0.9
MF(ALPHA)2	YGL089C	BCH2	P36122	765 aa		9.37	□□□□□ -0.91
MF(ALPHA)2	YGL089C	RSM7	P47150	247 aa		9.36	□□□□□ -0.91
MF(ALPHA)2	YGL089C	MAP2	P38174	421 aa	Known RBP	9.33	□□□□□ -0.92
MF(ALPHA)2	YGL089C	YLR271W	Q06152	274 aa		9.33	□□□□□ -0.92
MF(ALPHA)2	YGL089C	INO80	P53115	1489 aa		9.33	□□□□□ -0.92
MF(ALPHA)2	YGL089C	UBP10	P53874	792 aa	Predicted RBP	9.31	□□□□□ -0.92
MF(ALPHA)2	YGL089C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	9.31	□□□□□ -0.92	not detected
MF(ALPHA)2	YGL089C	MON2	P48563	1636 aa	Predicted RBP	9.31	□□□□□ -0.92
MF(ALPHA)2	YGL089C	SCY1	P53009	804 aa		9.3	□□□□□ -0.92
MF(ALPHA)2	YGL089C	SGS1	P35187	1447 aa		9.25	□□□□□ -0.93
MF(ALPHA)2	YGL089C	AI2	P03876	854 aa		9.22	□□□□□ -0.93
MF(ALPHA)2	YGL089C	EPS1	P40557	701 aa		9.2	□□□□□ -0.94
MF(ALPHA)2	YGL089C	BBC1	P47068	1157 aa		9.2	□□□□□ -0.94
MF(ALPHA)2	YGL089C	TCB3	Q03640	1545 aa	Known RBP	9.15	□□□□□ -0.95
MF(ALPHA)2	YGL089C	BDF1	P35817	686 aa		9.14	□□□□□ -0.95
MF(ALPHA)2	YGL089C	SLX5	P32828	619 aa	Known RBP	9.12	□□□□□ -0.95
MF(ALPHA)2	YGL089C	MGA2	P40578	1113 aa		9.1	□□□□□ -0.95
MF(ALPHA)2	YGL089C	PSD2	P53037	1138 aa	Known RBP	9.08	□□□□□ -0.96
MF(ALPHA)2	YGL089C	TY1B-DR4	Q07793	1604 aa		9.07	□□□□□ -0.96
MF(ALPHA)2	YGL089C	CST9	Q06032	482 aa		9.05	□□□□□ -0.96
MF(ALPHA)2	YGL089C	SWR1	Q05471	1514 aa		9	□□□□□ -0.97
MF(ALPHA)2	YGL089C	TIF4632	P39936	914 aa	Known RBP	8.97	□□□□□ -0.97
MF(ALPHA)2	YGL089C	MRM1	P25270	412 aa		8.95	□□□□□ -0.98
MF(ALPHA)2	YGL089C	DNA2	P38859	1522 aa		8.89	□□□□□ -0.99
MF(ALPHA)2	YGL089C	TGL3	P40308	642 aa		8.88	□□□□□ -0.99
MF(ALPHA)2	YGL089C	RQC2	Q12532	1038 aa	Known RBP	8.85	□□□□□ -0.99
MF(ALPHA)2	YGL089C	KOG1	P38873	1557 aa		8.81	□□□□□ -1
MF(ALPHA)2	YGL089C	HSL1	P34244	1518 aa		8.8	□□□□□ -1
MF(ALPHA)2	YGL089C	RTG3	P38165	486 aa		8.8	□□□□□ -1
MF(ALPHA)2	YGL089C	SPT6	P23615	1451 aa	Known RBP	8.8	□□□□□ -1
MF(ALPHA)2	YGL089C	DMA1	P38823	416 aa		8.77	□□□□□ -1.01
MF(ALPHA)2	YGL089C	RCR1	P38212	213 aa		8.76	□□□□□ -1.01
MF(ALPHA)2	YGL089C	SPA2	P23201	1466 aa	Known RBP	8.75	□□□□□ -1.01
MF(ALPHA)2	YGL089C	VPS29	P38759	282 aa		8.69	□□□□□ -1.02
MF(ALPHA)2	YGL089C	YAP5	P40574	245 aa		8.68	□□□□□ -1.02
MF(ALPHA)2	YGL089C	RAM2	P29703	316 aa		8.67	□□□□□ -1.02
MF(ALPHA)2	YGL089C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	8.66	□□□□□ -1.02	not detected
MF(ALPHA)2	YGL089C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	8.66	□□□□□ -1.02	not detected
MF(ALPHA)2	YGL089C	HIR3	P47171	1648 aa		8.65	□□□□□ -1.02
MF(ALPHA)2	YGL089C	SSN2	P38931	1420 aa		8.65	□□□□□ -1.02
MF(ALPHA)2	YGL089C	YOR238W	Q08634	303 aa		8.65	□□□□□ -1.02
MF(ALPHA)2	YGL089C	PIB1	Q06651	286 aa		8.63	□□□□□ -1.03
MF(ALPHA)2	YGL089C	YFR006W	P43590	535 aa		8.62	□□□□□ -1.03
MF(ALPHA)2	YGL089C	DBP1	P24784	617 aa	Known RBP	8.61	□□□□□ -1.03
MF(ALPHA)2	YGL089C	STS1	P38637	319 aa		8.58	□□□□□ -1.04
MF(ALPHA)2	YGL089C	XRN1	P22147	1528 aa	Known RBP	8.55	□□□□□ -1.04
MF(ALPHA)2	YGL089C	MST1	P07236	462 aa		8.55	□□□□□ -1.04
MF(ALPHA)2	YGL089C	MAK11	P20484	414 aa	Known RBP	8.55	□□□□□ -1.04
MF(ALPHA)2	YGL089C	ECM5	Q03214	1411 aa		8.52	□□□□□ -1.05
MF(ALPHA)2	YGL089C	GTT3	P39996	337 aa		8.5	□□□□□ -1.05
MF(ALPHA)2	YGL089C	MIF2	P35201	549 aa		8.48	□□□□□ -1.05
MF(ALPHA)2	YGL089C	THO2	P53552	1597 aa	Known RBP	8.47	□□□□□ -1.05
MF(ALPHA)2	YGL089C	BUD4	P47136	1447 aa		8.46	□□□□□ -1.05
MF(ALPHA)2	YGL089C	COQ8	P27697	501 aa		8.45	□□□□□ -1.06
MF(ALPHA)2	YGL089C	SET1	P38827	1080 aa	Known RBP	8.45	□□□□□ -1.06
MF(ALPHA)2	YGL089C	VMA1	P17255	1071 aa	Known RBP	8.43	□□□□□ -1.06
MF(ALPHA)2	YGL089C	UBP9	P39967	754 aa		8.42	□□□□□ -1.06
MF(ALPHA)2	YGL089C	WSC3	Q12215	556 aa		8.4	□□□□□ -1.06
MF(ALPHA)2	YGL089C	EDS1	P38073	919 aa		8.39	□□□□□ -1.07
MF(ALPHA)2	YGL089C	REV3	P14284	1504 aa		8.39	□□□□□ -1.07
MF(ALPHA)2	YGL089C	YBL029C-A	Q3E756	94 aa		8.37	□□□□□ -1.07
MF(ALPHA)2	YGL089C	PTC3	P34221	468 aa	Known RBP	8.35	□□□□□ -1.07
MF(ALPHA)2	YGL089C	TAF2	P23255	1407 aa		8.32	□□□□□ -1.08
MF(ALPHA)2	YGL089C	BUD31	P25337	157 aa	Predicted RBP	8.32	□□□□□ -1.08
MF(ALPHA)2	YGL089C	SAM3	Q08986	587 aa		8.32	□□□□□ -1.08
MF(ALPHA)2	YGL089C	MDS3	P53094	1487 aa		8.32	□□□□□ -1.08
MF(ALPHA)2	YGL089C	SET4	P42948	560 aa		8.31	□□□□□ -1.08

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms