RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeastyeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCW11YGL028C MTC1P47018 478 aaKnown RBP10.87□□□□□ -0.67
SCW11YGL028C FAP1P53971 965 aa10.71□□□□□ -0.69
SCW11YGL028C PRY3P47033 881 aa10.1□□□□□ -0.79
SCW11YGL028C AAD16Q02895 342 aa9.66□□□□□ -0.86
SCW11YGL028C PRI1P10363 409 aa9.61□□□□□ -0.87
SCW11YGL028C YCK3P39962 524 aa9.47□□□□□ -0.89
SCW11YGL028C HAA1Q12753 694 aaKnown RBP9.42□□□□□ -0.9
SCW11YGL028C DRS1P32892 752 aaKnown RBP9.38□□□□□ -0.91
SCW11YGL028C ISW2Q08773 1120 aa9.2□□□□□ -0.94
SCW11YGL028C RPG1P38249 964 aaKnown RBP9.13□□□□□ -0.95
SCW11YGL028C TSR3Q12094 313 aaKnown RBP9.05□□□□□ -0.96
SCW11YGL028C MRPL32P25348 183 aa8.71□□□□□ -1.02
SCW11YGL028C YGL015CP33199 130 aa8.56□□□□□ -1.04
SCW11YGL028C DIP2Q12220 943 aaPredicted RBP8.5□□□□□ -1.05
SCW11YGL028C RSE1Q04693 1361 aaKnown RBP8.45□□□□□ -1.06
SCW11YGL028C REB1P21538 810 aa8.28□□□□□ -1.08
SCW11YGL028C RPL17AP05740 184 aaKnown RBP8.24□□□□□ -1.09
SCW11YGL028C RPL17BP46990 184 aaKnown RBP8.24□□□□□ -1.09
SCW11YGL028C BUD31P25337 157 aaPredicted RBP8.19□□□□□ -1.1
SCW11YGL028C CDC27P38042 758 aa8.12□□□□□ -1.11
SCW11YGL028C UBP10P53874 792 aaPredicted RBP7.99□□□□□ -1.13
SCW11YGL028C MAP2P38174 421 aaKnown RBP7.96□□□□□ -1.13
SCW11YGL028C AVT3P36062 692 aa7.95□□□□□ -1.14
SCW11YGL028C YKR023WP36119 530 aaKnown RBP7.89□□□□□ -1.15
SCW11YGL028C SPT21P35209 758 aa7.8□□□□□ -1.16
SCW11YGL028C HOP09932 586 aa7.75□□□□□ -1.17
SCW11YGL028C SIS1P25294 352 aaKnown RBP7.74□□□□□ -1.17
SCW11YGL028C DCD1P06773 312 aa7.74□□□□□ -1.17
SCW11YGL028C TFC8Q12308 588 aa7.74□□□□□ -1.17
SCW11YGL028C TIF4632P39936 914 aaKnown RBP7.68□□□□□ -1.18
SCW11YGL028C UBP9P39967 754 aa7.67□□□□□ -1.18
SCW11YGL028C SCY1P53009 804 aa7.67□□□□□ -1.18
SCW11YGL028C TGL3P40308 642 aa7.64□□□□□ -1.19
SCW11YGL028C SLX5P32828 619 aaKnown RBP7.62□□□□□ -1.19
SCW11YGL028C BCH2P36122 765 aa7.45□□□□□ -1.22
SCW11YGL028C BFR2Q06631 534 aaKnown RBP7.42□□□□□ -1.22
SCW11YGL028C RIM101P33400 625 aa7.34□□□□□ -1.23
SCW11YGL028C YBL029C-AQ3E756 94 aa7.26□□□□□ -1.25
SCW11YGL028C EPS1P40557 701 aa7.23□□□□□ -1.25
SCW11YGL028C MST1P07236 462 aa7.22□□□□□ -1.25
SCW11YGL028C BDF1P35817 686 aa7.19□□□□□ -1.26
SCW11YGL028C YOR238WQ08634 303 aa7.18□□□□□ -1.26
SCW11YGL028C VNX1P42839 908 aa7.13□□□□□ -1.27
SCW11YGL028C OXP1P28273 1286 aa7.08□□□□□ -1.28
SCW11YGL028C SPP1Q03012 353 aa7.08□□□□□ -1.28
SCW11YGL028C NSR1P27476 414 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
SCW11YGL028C WSC3Q12215 556 aa7.04□□□□□ -1.28
SCW11YGL028C PTP3P40048 928 aa7.03□□□□□ -1.28
SCW11YGL028C YAP5P40574 245 aa7.01□□□□□ -1.29
SCW11YGL028C AIR2Q12476 344 aaKnown RBP7□□□□□ -1.29
SCW11YGL028C YIL055CP40523 627 aaKnown RBP6.99□□□□□ -1.29
SCW11YGL028C YJL171CP46992 396 aa6.99□□□□□ -1.29
SCW11YGL028C FKH1P40466 484 aa6.97□□□□□ -1.29
SCW11YGL028C BBC1P47068 1157 aa6.96□□□□□ -1.3
SCW11YGL028C TIF11P38912 153 aaKnown RBP6.95□□□□□ -1.3
SCW11YGL028C GTT3P39996 337 aa6.91□□□□□ -1.3
SCW11YGL028C AI2P03876 854 aa6.89□□□□□ -1.31
SCW11YGL028C RSM7P47150 247 aa6.89□□□□□ -1.31
SCW11YGL028C LDB19Q12502 818 aa6.86□□□□□ -1.31
SCW11YGL028C BMT6Q12291 365 aa6.84□□□□□ -1.31
SCW11YGL028C ULI1P43604 169 aa6.83□□□□□ -1.32
SCW11YGL028C IOC2Q12072 812 aa6.79□□□□□ -1.32
SCW11YGL028C YAH1Q12184 172 aaKnown RBP6.79□□□□□ -1.32
SCW11YGL028C PIB1Q06651 286 aa6.76□□□□□ -1.33
SCW11YGL028C MSB4Q12317 492 aa6.69□□□□□ -1.34
SCW11YGL028C EAP1P36041 632 aaKnown RBP6.68□□□□□ -1.34
SCW11YGL028C RTG1P32607 177 aa6.66□□□□□ -1.34
SCW11YGL028C YOL036WQ08206 761 aa6.62□□□□□ -1.35
SCW11YGL028C NCR1Q12200 1170 aa6.62□□□□□ -1.35
SCW11YGL028C TRP5P00931 707 aaKnown RBP6.61□□□□□ -1.35
SCW11YGL028C SET4P42948 560 aa6.61□□□□□ -1.35
SCW11YGL028C YLR271WQ06152 274 aa6.61□□□□□ -1.35
SCW11YGL028C MRM1P25270 412 aa6.61□□□□□ -1.35
SCW11YGL028C PSD2P53037 1138 aaKnown RBP6.61□□□□□ -1.35
SCW11YGL028C YNL035CP53962 389 aaKnown RBP6.58□□□□□ -1.36
SCW11YGL028C SEC61P32915 480 aa6.56□□□□□ -1.36
SCW11YGL028C YMR1P47147 688 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
SCW11YGL028C TFG1P41895 735 aaPredicted RBP6.5□□□□□ -1.37
SCW11YGL028C DBP1P24784 617 aaKnown RBP6.49□□□□□ -1.37
SCW11YGL028C BCK2P33306 851 aa6.48□□□□□ -1.37
SCW11YGL028C VMA1P17255 1071 aaKnown RBP6.47□□□□□ -1.37
SCW11YGL028C YFR006WP43590 535 aa6.47□□□□□ -1.37
SCW11YGL028C SAP30P38429 201 aa6.47□□□□□ -1.37
SCW11YGL028C VPS29P38759 282 aa6.46□□□□□ -1.38
SCW11YGL028C SAM3Q08986 587 aa6.46□□□□□ -1.38
SCW11YGL028C CHL1P22516 861 aaPredicted RBP6.42□□□□□ -1.38
SCW11YGL028C STS1P38637 319 aa6.42□□□□□ -1.38
SCW11YGL028C DAN4P47179 1161 aa6.42□□□□□ -1.38
SCW11YGL028C RTG3P38165 486 aa6.41□□□□□ -1.38
SCW11YGL028C JIP4Q03361 876 aa6.4□□□□□ -1.38
SCW11YGL028C YDL129WQ07555 291 aa6.4□□□□□ -1.38
SCW11YGL028C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
SCW11YGL028C PRE3P38624 215 aa6.38□□□□□ -1.39
SCW11YGL028C ABP1P15891 592 aaKnown RBP6.36□□□□□ -1.39
SCW11YGL028C CST9Q06032 482 aa6.35□□□□□ -1.39
SCW11YGL028C GYP5Q12344 894 aa6.35□□□□□ -1.39
SCW11YGL028C HTA1P04911 132 aaKnown RBP6.33□□□□□ -1.4
SCW11YGL028C HTA2P04912 132 aa6.33□□□□□ -1.4
SCW11YGL028C TFA1P36100 482 aa6.33□□□□□ -1.4
SCW11YGL028C SSP1P38871 571 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms