RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeastyeast

Gene ECO1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECO1YFR027W MTC1P47018 478 aaKnown RBP11.64□□□□□ -0.55
ECO1YFR027W FAP1P53971 965 aa11.15□□□□□ -0.62
ECO1YFR027W PRY3P47033 881 aa10.53□□□□□ -0.72
ECO1YFR027W PRI1P10363 409 aa10.19□□□□□ -0.78
ECO1YFR027W DRS1P32892 752 aaKnown RBP10.19□□□□□ -0.78
ECO1YFR027W AAD16Q02895 342 aa10.18□□□□□ -0.78
ECO1YFR027W YCK3P39962 524 aa10.04□□□□□ -0.8
ECO1YFR027W HAA1Q12753 694 aaKnown RBP9.84□□□□□ -0.83
ECO1YFR027W ISW2Q08773 1120 aa9.75□□□□□ -0.85
ECO1YFR027W RPG1P38249 964 aaKnown RBP9.69□□□□□ -0.86
ECO1YFR027W TSR3Q12094 313 aaKnown RBP9.58□□□□□ -0.88
ECO1YFR027W DIP2Q12220 943 aaPredicted RBP9.18□□□□□ -0.94
ECO1YFR027W MRPL32P25348 183 aa9.17□□□□□ -0.94
ECO1YFR027W RSE1Q04693 1361 aaKnown RBP9.04□□□□□ -0.96
ECO1YFR027W YGL015CP33199 130 aa8.98□□□□□ -0.97
ECO1YFR027W RPL17AP05740 184 aaKnown RBP8.81□□□□□ -1
ECO1YFR027W RPL17BP46990 184 aaKnown RBP8.81□□□□□ -1
ECO1YFR027W REB1P21538 810 aa8.79□□□□□ -1
ECO1YFR027W AVT3P36062 692 aa8.7□□□□□ -1.02
ECO1YFR027W CDC27P38042 758 aa8.67□□□□□ -1.02
ECO1YFR027W BUD31P25337 157 aaPredicted RBP8.56□□□□□ -1.04
ECO1YFR027W YKR023WP36119 530 aaKnown RBP8.49□□□□□ -1.05
ECO1YFR027W UBP10P53874 792 aaPredicted RBP8.47□□□□□ -1.05
ECO1YFR027W BFR2Q06631 534 aaKnown RBP8.47□□□□□ -1.05
ECO1YFR027W MAP2P38174 421 aaKnown RBP8.45□□□□□ -1.06
ECO1YFR027W SPT21P35209 758 aa8.44□□□□□ -1.06
ECO1YFR027W TFC8Q12308 588 aa8.3□□□□□ -1.08
ECO1YFR027W HOP09932 586 aa8.29□□□□□ -1.08
ECO1YFR027W DCD1P06773 312 aa8.28□□□□□ -1.08
ECO1YFR027W SCY1P53009 804 aa8.15□□□□□ -1.1
ECO1YFR027W TGL3P40308 642 aa8.09□□□□□ -1.11
ECO1YFR027W TIF4632P39936 914 aaKnown RBP8.08□□□□□ -1.12
ECO1YFR027W SLX5P32828 619 aaKnown RBP8.07□□□□□ -1.12
ECO1YFR027W SIS1P25294 352 aaKnown RBP8.03□□□□□ -1.12
ECO1YFR027W BCH2P36122 765 aa8□□□□□ -1.13
ECO1YFR027W UBP9P39967 754 aa8□□□□□ -1.13
ECO1YFR027W RIM101P33400 625 aa7.98□□□□□ -1.13
ECO1YFR027W TFA1P36100 482 aa7.84□□□□□ -1.15
ECO1YFR027W BDF1P35817 686 aa7.74□□□□□ -1.17
ECO1YFR027W EPS1P40557 701 aa7.74□□□□□ -1.17
ECO1YFR027W MST1P07236 462 aa7.72□□□□□ -1.17
ECO1YFR027W OXP1P28273 1286 aa7.71□□□□□ -1.18
ECO1YFR027W YBL029C-AQ3E756 94 aa7.67□□□□□ -1.18
ECO1YFR027W YOR238WQ08634 303 aa7.61□□□□□ -1.19
ECO1YFR027W NSR1P27476 414 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
ECO1YFR027W VNX1P42839 908 aa7.56□□□□□ -1.2
ECO1YFR027W PTP3P40048 928 aa7.54□□□□□ -1.2
ECO1YFR027W YIL055CP40523 627 aaKnown RBP7.5□□□□□ -1.21
ECO1YFR027W YAP5P40574 245 aa7.46□□□□□ -1.22
ECO1YFR027W SPP1Q03012 353 aa7.46□□□□□ -1.22
ECO1YFR027W BBC1P47068 1157 aa7.44□□□□□ -1.22
ECO1YFR027W RSM7P47150 247 aa7.44□□□□□ -1.22
ECO1YFR027W AI2P03876 854 aa7.43□□□□□ -1.22
ECO1YFR027W WSC3Q12215 556 aa7.42□□□□□ -1.22
ECO1YFR027W AIR2Q12476 344 aaKnown RBP7.42□□□□□ -1.22
ECO1YFR027W FKH1P40466 484 aa7.38□□□□□ -1.23
ECO1YFR027W TIF11P38912 153 aaKnown RBP7.36□□□□□ -1.23
ECO1YFR027W YAH1Q12184 172 aaKnown RBP7.33□□□□□ -1.24
ECO1YFR027W YJL171CP46992 396 aa7.29□□□□□ -1.24
ECO1YFR027W GTT3P39996 337 aa7.28□□□□□ -1.24
ECO1YFR027W IOC2Q12072 812 aa7.26□□□□□ -1.25
ECO1YFR027W LDB19Q12502 818 aa7.26□□□□□ -1.25
ECO1YFR027W ULI1P43604 169 aa7.23□□□□□ -1.25
ECO1YFR027W YLR271WQ06152 274 aa7.23□□□□□ -1.25
ECO1YFR027W PSD2P53037 1138 aaKnown RBP7.21□□□□□ -1.26
ECO1YFR027W PIB1Q06651 286 aa7.21□□□□□ -1.26
ECO1YFR027W BMT6Q12291 365 aa7.18□□□□□ -1.26
ECO1YFR027W MSB4Q12317 492 aa7.13□□□□□ -1.27
ECO1YFR027W MRM1P25270 412 aa7.12□□□□□ -1.27
ECO1YFR027W EAP1P36041 632 aaKnown RBP7.08□□□□□ -1.28
ECO1YFR027W YOL036WQ08206 761 aa7.08□□□□□ -1.28
ECO1YFR027W RTG1P32607 177 aa7.07□□□□□ -1.28
ECO1YFR027W TRP5P00931 707 aaKnown RBP7.06□□□□□ -1.28
ECO1YFR027W SET4P42948 560 aa7.06□□□□□ -1.28
ECO1YFR027W NCR1Q12200 1170 aa7.02□□□□□ -1.29
ECO1YFR027W VPS29P38759 282 aa7.01□□□□□ -1.29
ECO1YFR027W YMR1P47147 688 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
ECO1YFR027W DBP1P24784 617 aaKnown RBP6.99□□□□□ -1.29
ECO1YFR027W YNL035CP53962 389 aaKnown RBP6.99□□□□□ -1.29
ECO1YFR027W SEC61P32915 480 aa6.98□□□□□ -1.29
ECO1YFR027W VMA1P17255 1071 aaKnown RBP6.97□□□□□ -1.29
ECO1YFR027W STS1P38637 319 aa6.97□□□□□ -1.29
ECO1YFR027W YFR006WP43590 535 aa6.97□□□□□ -1.29
ECO1YFR027W SAM3Q08986 587 aa6.96□□□□□ -1.3
ECO1YFR027W CST9Q06032 482 aa6.95□□□□□ -1.3
ECO1YFR027W SSP1P38871 571 aa6.94□□□□□ -1.3
ECO1YFR027W RTG3P38165 486 aa6.92□□□□□ -1.3
ECO1YFR027W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
ECO1YFR027W DAN4P47179 1161 aa6.9□□□□□ -1.3
ECO1YFR027W SAP30P38429 201 aa6.86□□□□□ -1.31
ECO1YFR027W RCR1P38212 213 aa6.85□□□□□ -1.31
ECO1YFR027W MGA2P40578 1113 aa6.84□□□□□ -1.31
ECO1YFR027W TFG1P41895 735 aaPredicted RBP6.84□□□□□ -1.31
ECO1YFR027W JIP4Q03361 876 aa6.84□□□□□ -1.31
ECO1YFR027W BCK2P33306 851 aa6.83□□□□□ -1.32
ECO1YFR027W YDL129WQ07555 291 aa6.82□□□□□ -1.32
ECO1YFR027W ABP1P15891 592 aaKnown RBP6.8□□□□□ -1.32
ECO1YFR027W CHL1P22516 861 aaPredicted RBP6.8□□□□□ -1.32
ECO1YFR027W GYP5Q12344 894 aa6.8□□□□□ -1.32
ECO1YFR027W PRE3P38624 215 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms