RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A MTC1P47018 478 aaKnown RBP10.64□□□□□ -0.71
YER088C-AYER088C-A FAP1P53971 965 aa10.42□□□□□ -0.74
YER088C-AYER088C-A PRY3P47033 881 aa9.81□□□□□ -0.84
YER088C-AYER088C-A AAD16Q02895 342 aa9.42□□□□□ -0.9
YER088C-AYER088C-A PRI1P10363 409 aa9.39□□□□□ -0.91
YER088C-AYER088C-A HAA1Q12753 694 aaKnown RBP9.2□□□□□ -0.94
YER088C-AYER088C-A YCK3P39962 524 aa9.17□□□□□ -0.94
YER088C-AYER088C-A DRS1P32892 752 aaKnown RBP9.15□□□□□ -0.94
YER088C-AYER088C-A ISW2Q08773 1120 aa9.01□□□□□ -0.97
YER088C-AYER088C-A RPG1P38249 964 aaKnown RBP8.88□□□□□ -0.99
YER088C-AYER088C-A TSR3Q12094 313 aaKnown RBP8.79□□□□□ -1
YER088C-AYER088C-A MRPL32P25348 183 aa8.5□□□□□ -1.05
YER088C-AYER088C-A YGL015CP33199 130 aa8.38□□□□□ -1.07
YER088C-AYER088C-A DIP2Q12220 943 aaPredicted RBP8.29□□□□□ -1.08
YER088C-AYER088C-A RSE1Q04693 1361 aaKnown RBP8.25□□□□□ -1.09
YER088C-AYER088C-A REB1P21538 810 aa8.09□□□□□ -1.11
YER088C-AYER088C-A RPL17AP05740 184 aaKnown RBP8.02□□□□□ -1.13
YER088C-AYER088C-A BUD31P25337 157 aaPredicted RBP8.02□□□□□ -1.13
YER088C-AYER088C-A RPL17BP46990 184 aaKnown RBP8.02□□□□□ -1.13
YER088C-AYER088C-A CDC27P38042 758 aa7.88□□□□□ -1.15
YER088C-AYER088C-A UBP10P53874 792 aaPredicted RBP7.86□□□□□ -1.15
YER088C-AYER088C-A AVT3P36062 692 aa7.77□□□□□ -1.17
YER088C-AYER088C-A MAP2P38174 421 aaKnown RBP7.75□□□□□ -1.17
YER088C-AYER088C-A YKR023WP36119 530 aaKnown RBP7.69□□□□□ -1.18
YER088C-AYER088C-A SPT21P35209 758 aa7.62□□□□□ -1.19
YER088C-AYER088C-A SIS1P25294 352 aaKnown RBP7.56□□□□□ -1.2
YER088C-AYER088C-A TFC8Q12308 588 aa7.56□□□□□ -1.2
YER088C-AYER088C-A TIF4632P39936 914 aaKnown RBP7.55□□□□□ -1.2
YER088C-AYER088C-A UBP9P39967 754 aa7.53□□□□□ -1.2
YER088C-AYER088C-A HOP09932 586 aa7.51□□□□□ -1.21
YER088C-AYER088C-A TGL3P40308 642 aa7.5□□□□□ -1.21
YER088C-AYER088C-A DCD1P06773 312 aa7.49□□□□□ -1.21
YER088C-AYER088C-A SCY1P53009 804 aa7.46□□□□□ -1.22
YER088C-AYER088C-A SLX5P32828 619 aaKnown RBP7.45□□□□□ -1.22
YER088C-AYER088C-A BCH2P36122 765 aa7.26□□□□□ -1.25
YER088C-AYER088C-A BFR2Q06631 534 aaKnown RBP7.25□□□□□ -1.25
YER088C-AYER088C-A RIM101P33400 625 aa7.19□□□□□ -1.26
YER088C-AYER088C-A MST1P07236 462 aa7.09□□□□□ -1.27
YER088C-AYER088C-A YBL029C-AQ3E756 94 aa7.07□□□□□ -1.28
YER088C-AYER088C-A EPS1P40557 701 aa7.04□□□□□ -1.28
YER088C-AYER088C-A BDF1P35817 686 aa7.03□□□□□ -1.28
YER088C-AYER088C-A YOR238WQ08634 303 aa7.03□□□□□ -1.28
YER088C-AYER088C-A NSR1P27476 414 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
YER088C-AYER088C-A VNX1P42839 908 aa6.97□□□□□ -1.29
YER088C-AYER088C-A SPP1Q03012 353 aa6.92□□□□□ -1.3
YER088C-AYER088C-A YAP5P40574 245 aa6.89□□□□□ -1.31
YER088C-AYER088C-A OXP1P28273 1286 aa6.88□□□□□ -1.31
YER088C-AYER088C-A YJL171CP46992 396 aa6.87□□□□□ -1.31
YER088C-AYER088C-A PTP3P40048 928 aa6.86□□□□□ -1.31
YER088C-AYER088C-A YIL055CP40523 627 aaKnown RBP6.84□□□□□ -1.31
YER088C-AYER088C-A AIR2Q12476 344 aaKnown RBP6.84□□□□□ -1.31
YER088C-AYER088C-A FKH1P40466 484 aa6.83□□□□□ -1.32
YER088C-AYER088C-A BBC1P47068 1157 aa6.83□□□□□ -1.32
YER088C-AYER088C-A WSC3Q12215 556 aa6.83□□□□□ -1.32
YER088C-AYER088C-A TIF11P38912 153 aaKnown RBP6.81□□□□□ -1.32
YER088C-AYER088C-A GTT3P39996 337 aa6.77□□□□□ -1.33
YER088C-AYER088C-A AI2P03876 854 aa6.73□□□□□ -1.33
YER088C-AYER088C-A RSM7P47150 247 aa6.73□□□□□ -1.33
YER088C-AYER088C-A LDB19Q12502 818 aa6.71□□□□□ -1.34
YER088C-AYER088C-A BMT6Q12291 365 aa6.7□□□□□ -1.34
YER088C-AYER088C-A ULI1P43604 169 aa6.67□□□□□ -1.34
YER088C-AYER088C-A IOC2Q12072 812 aa6.64□□□□□ -1.35
YER088C-AYER088C-A MSB4Q12317 492 aa6.61□□□□□ -1.35
YER088C-AYER088C-A EAP1P36041 632 aaKnown RBP6.59□□□□□ -1.35
YER088C-AYER088C-A YAH1Q12184 172 aaKnown RBP6.58□□□□□ -1.36
YER088C-AYER088C-A PIB1Q06651 286 aa6.54□□□□□ -1.36
YER088C-AYER088C-A RTG1P32607 177 aa6.51□□□□□ -1.37
YER088C-AYER088C-A NCR1Q12200 1170 aa6.49□□□□□ -1.37
YER088C-AYER088C-A SEC61P32915 480 aa6.47□□□□□ -1.37
YER088C-AYER088C-A YOL036WQ08206 761 aa6.47□□□□□ -1.37
YER088C-AYER088C-A TRP5P00931 707 aaKnown RBP6.46□□□□□ -1.38
YER088C-AYER088C-A PSD2P53037 1138 aaKnown RBP6.46□□□□□ -1.38
YER088C-AYER088C-A SET4P42948 560 aa6.45□□□□□ -1.38
YER088C-AYER088C-A YNL035CP53962 389 aaKnown RBP6.45□□□□□ -1.38
YER088C-AYER088C-A YLR271WQ06152 274 aa6.45□□□□□ -1.38
YER088C-AYER088C-A MRM1P25270 412 aa6.44□□□□□ -1.38
YER088C-AYER088C-A TFG1P41895 735 aaPredicted RBP6.4□□□□□ -1.38
YER088C-AYER088C-A BCK2P33306 851 aa6.37□□□□□ -1.39
YER088C-AYER088C-A YMR1P47147 688 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
YER088C-AYER088C-A VMA1P17255 1071 aaKnown RBP6.34□□□□□ -1.39
YER088C-AYER088C-A DBP1P24784 617 aaKnown RBP6.34□□□□□ -1.39
YER088C-AYER088C-A SAM3Q08986 587 aa6.34□□□□□ -1.39
YER088C-AYER088C-A CHL1P22516 861 aaPredicted RBP6.32□□□□□ -1.4
YER088C-AYER088C-A ABP1P15891 592 aaKnown RBP6.31□□□□□ -1.4
YER088C-AYER088C-A SAP30P38429 201 aa6.31□□□□□ -1.4
YER088C-AYER088C-A JIP4Q03361 876 aa6.31□□□□□ -1.4
YER088C-AYER088C-A VPS29P38759 282 aa6.3□□□□□ -1.4
YER088C-AYER088C-A TFA1P36100 482 aa6.29□□□□□ -1.4
YER088C-AYER088C-A YDL129WQ07555 291 aa6.29□□□□□ -1.4
YER088C-AYER088C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
YER088C-AYER088C-A RTG3P38165 486 aa6.28□□□□□ -1.4
YER088C-AYER088C-A YFR006WP43590 535 aa6.28□□□□□ -1.4
YER088C-AYER088C-A DAN4P47179 1161 aa6.28□□□□□ -1.4
YER088C-AYER088C-A PRE3P38624 215 aa6.26□□□□□ -1.41
YER088C-AYER088C-A STS1P38637 319 aa6.26□□□□□ -1.41
YER088C-AYER088C-A HTA1P04911 132 aaKnown RBP6.22□□□□□ -1.41
YER088C-AYER088C-A HTA2P04912 132 aa6.22□□□□□ -1.41
YER088C-AYER088C-A SSP1P38871 571 aa6.21□□□□□ -1.42
YER088C-AYER088C-A GYP5Q12344 894 aa6.21□□□□□ -1.42
YER088C-AYER088C-A PTC4P38089 393 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms