RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W MTC1P47018 478 aaKnown RBP12.33□□□□□ -0.44
RPN3YER021W FAP1P53971 965 aa12.04□□□□□ -0.48
RPN3YER021W PRY3P47033 881 aa11.37□□□□□ -0.59
RPN3YER021W AAD16Q02895 342 aa10.92□□□□□ -0.66
RPN3YER021W PRI1P10363 409 aa10.89□□□□□ -0.67
RPN3YER021W YCK3P39962 524 aa10.82□□□□□ -0.68
RPN3YER021W DRS1P32892 752 aaKnown RBP10.66□□□□□ -0.7
RPN3YER021W HAA1Q12753 694 aaKnown RBP10.6□□□□□ -0.71
RPN3YER021W ISW2Q08773 1120 aa10.36□□□□□ -0.75
RPN3YER021W RPG1P38249 964 aaKnown RBP10.34□□□□□ -0.75
RPN3YER021W TSR3Q12094 313 aaKnown RBP10.26□□□□□ -0.77
RPN3YER021W MRPL32P25348 183 aa9.81□□□□□ -0.84
RPN3YER021W DIP2Q12220 943 aaPredicted RBP9.66□□□□□ -0.86
RPN3YER021W YGL015CP33199 130 aa9.64□□□□□ -0.87
RPN3YER021W RSE1Q04693 1361 aaKnown RBP9.56□□□□□ -0.88
RPN3YER021W RPL17AP05740 184 aaKnown RBP9.34□□□□□ -0.91
RPN3YER021W RPL17BP46990 184 aaKnown RBP9.34□□□□□ -0.91
RPN3YER021W REB1P21538 810 aa9.33□□□□□ -0.92
RPN3YER021W BUD31P25337 157 aaPredicted RBP9.24□□□□□ -0.93
RPN3YER021W CDC27P38042 758 aa9.24□□□□□ -0.93
RPN3YER021W AVT3P36062 692 aa9.09□□□□□ -0.95
RPN3YER021W MAP2P38174 421 aaKnown RBP9.03□□□□□ -0.96
RPN3YER021W BFR2Q06631 534 aaKnown RBP9.02□□□□□ -0.97
RPN3YER021W YKR023WP36119 530 aaKnown RBP9.01□□□□□ -0.97
RPN3YER021W UBP10P53874 792 aaPredicted RBP9.01□□□□□ -0.97
RPN3YER021W SPT21P35209 758 aa8.9□□□□□ -0.99
RPN3YER021W DCD1P06773 312 aa8.82□□□□□ -1
RPN3YER021W HOP09932 586 aa8.82□□□□□ -1
RPN3YER021W TFC8Q12308 588 aa8.8□□□□□ -1
RPN3YER021W SIS1P25294 352 aaKnown RBP8.7□□□□□ -1.02
RPN3YER021W SCY1P53009 804 aa8.69□□□□□ -1.02
RPN3YER021W TGL3P40308 642 aa8.64□□□□□ -1.03
RPN3YER021W TIF4632P39936 914 aaKnown RBP8.61□□□□□ -1.03
RPN3YER021W SLX5P32828 619 aaKnown RBP8.6□□□□□ -1.03
RPN3YER021W UBP9P39967 754 aa8.59□□□□□ -1.03
RPN3YER021W BCH2P36122 765 aa8.49□□□□□ -1.05
RPN3YER021W TFA1P36100 482 aa8.4□□□□□ -1.06
RPN3YER021W RIM101P33400 625 aa8.39□□□□□ -1.07
RPN3YER021W MST1P07236 462 aa8.2□□□□□ -1.1
RPN3YER021W EPS1P40557 701 aa8.2□□□□□ -1.1
RPN3YER021W YBL029C-AQ3E756 94 aa8.2□□□□□ -1.1
RPN3YER021W BDF1P35817 686 aa8.19□□□□□ -1.1
RPN3YER021W OXP1P28273 1286 aa8.11□□□□□ -1.11
RPN3YER021W YOR238WQ08634 303 aa8.1□□□□□ -1.11
RPN3YER021W VNX1P42839 908 aa8.07□□□□□ -1.12
RPN3YER021W NSR1P27476 414 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
RPN3YER021W SPP1Q03012 353 aa7.97□□□□□ -1.13
RPN3YER021W WSC3Q12215 556 aa7.95□□□□□ -1.14
RPN3YER021W PTP3P40048 928 aa7.94□□□□□ -1.14
RPN3YER021W AIR2Q12476 344 aaKnown RBP7.93□□□□□ -1.14
RPN3YER021W YAP5P40574 245 aa7.92□□□□□ -1.14
RPN3YER021W YIL055CP40523 627 aaKnown RBP7.91□□□□□ -1.14
RPN3YER021W FKH1P40466 484 aa7.87□□□□□ -1.15
RPN3YER021W TIF11P38912 153 aaKnown RBP7.84□□□□□ -1.15
RPN3YER021W BBC1P47068 1157 aa7.84□□□□□ -1.15
RPN3YER021W YJL171CP46992 396 aa7.84□□□□□ -1.15
RPN3YER021W AI2P03876 854 aa7.83□□□□□ -1.16
RPN3YER021W RSM7P47150 247 aa7.83□□□□□ -1.16
RPN3YER021W GTT3P39996 337 aa7.75□□□□□ -1.17
RPN3YER021W LDB19Q12502 818 aa7.74□□□□□ -1.17
RPN3YER021W IOC2Q12072 812 aa7.71□□□□□ -1.17
RPN3YER021W YAH1Q12184 172 aaKnown RBP7.71□□□□□ -1.17
RPN3YER021W ULI1P43604 169 aa7.71□□□□□ -1.18
RPN3YER021W PIB1Q06651 286 aa7.68□□□□□ -1.18
RPN3YER021W BMT6Q12291 365 aa7.67□□□□□ -1.18
RPN3YER021W YLR271WQ06152 274 aa7.58□□□□□ -1.2
RPN3YER021W PSD2P53037 1138 aaKnown RBP7.54□□□□□ -1.2
RPN3YER021W RTG1P32607 177 aa7.53□□□□□ -1.2
RPN3YER021W MSB4Q12317 492 aa7.53□□□□□ -1.2
RPN3YER021W MRM1P25270 412 aa7.51□□□□□ -1.21
RPN3YER021W EAP1P36041 632 aaKnown RBP7.5□□□□□ -1.21
RPN3YER021W SET4P42948 560 aa7.5□□□□□ -1.21
RPN3YER021W TRP5P00931 707 aaKnown RBP7.49□□□□□ -1.21
RPN3YER021W YOL036WQ08206 761 aa7.49□□□□□ -1.21
RPN3YER021W NCR1Q12200 1170 aa7.49□□□□□ -1.21
RPN3YER021W YNL035CP53962 389 aaKnown RBP7.42□□□□□ -1.22
RPN3YER021W SEC61P32915 480 aa7.41□□□□□ -1.22
RPN3YER021W VPS29P38759 282 aa7.39□□□□□ -1.23
RPN3YER021W DBP1P24784 617 aaKnown RBP7.38□□□□□ -1.23
RPN3YER021W YFR006WP43590 535 aa7.37□□□□□ -1.23
RPN3YER021W YMR1P47147 688 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
RPN3YER021W VMA1P17255 1071 aaKnown RBP7.34□□□□□ -1.23
RPN3YER021W SSP1P38871 571 aa7.34□□□□□ -1.23
RPN3YER021W SAM3Q08986 587 aa7.33□□□□□ -1.24
RPN3YER021W STS1P38637 319 aa7.33□□□□□ -1.24
RPN3YER021W SAP30P38429 201 aa7.3□□□□□ -1.24
RPN3YER021W DAN4P47179 1161 aa7.3□□□□□ -1.24
RPN3YER021W BCK2P33306 851 aa7.28□□□□□ -1.24
RPN3YER021W TFG1P41895 735 aaPredicted RBP7.28□□□□□ -1.24
RPN3YER021W CST9Q06032 482 aa7.27□□□□□ -1.25
RPN3YER021W RTG3P38165 486 aa7.25□□□□□ -1.25
RPN3YER021W CHL1P22516 861 aaPredicted RBP7.23□□□□□ -1.25
RPN3YER021W YDL129WQ07555 291 aa7.23□□□□□ -1.25
RPN3YER021W JIP4Q03361 876 aa7.22□□□□□ -1.25
RPN3YER021W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
RPN3YER021W RCR1P38212 213 aa7.2□□□□□ -1.26
RPN3YER021W PRE3P38624 215 aa7.2□□□□□ -1.26
RPN3YER021W GYP5Q12344 894 aa7.18□□□□□ -1.26
RPN3YER021W DCW1P36091 449 aa7.16□□□□□ -1.26
RPN3YER021W HTA1P04911 132 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms