RNA–Protein interactions for RNA: YDR462W

MRPL28, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL28, Length 444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL28YDR462W SGS1P35187 1447 aa11.79□□□□□ -0.52
MRPL28YDR462W INO80P53115 1489 aa11.57□□□□□ -0.56
MRPL28YDR462W SPA2P23201 1466 aaKnown RBP11.54□□□□□ -0.56
MRPL28YDR462W SSN2P38931 1420 aa11.4□□□□□ -0.58
MRPL28YDR462W TCB3Q03640 1545 aaKnown RBP11.29□□□□□ -0.6
MRPL28YDR462W TY1B-DR4Q07793 1604 aa11.14□□□□□ -0.63
MRPL28YDR462W DRS1P32892 752 aaKnown RBP10.99□□□□□ -0.65
MRPL28YDR462W HSL1P34244 1518 aa10.95□□□□□ -0.66
MRPL28YDR462W SPT6P23615 1451 aaKnown RBP10.9□□□□□ -0.66
MRPL28YDR462W MON2P48563 1636 aaPredicted RBP10.85□□□□□ -0.67
MRPL28YDR462W HIR3P47171 1648 aa10.77□□□□□ -0.68
MRPL28YDR462W SWR1Q05471 1514 aa10.74□□□□□ -0.69
MRPL28YDR462W XRN1P22147 1528 aaKnown RBP10.7□□□□□ -0.7
MRPL28YDR462W REV3P14284 1504 aa10.61□□□□□ -0.71
MRPL28YDR462W SIN3P22579 1536 aa10.61□□□□□ -0.71
MRPL28YDR462W THO2P53552 1597 aaKnown RBP10.58□□□□□ -0.72
MRPL28YDR462W SSK2P53599 1579 aa10.52□□□□□ -0.72
MRPL28YDR462W SKI3P17883 1432 aaKnown RBP10.5□□□□□ -0.73
MRPL28YDR462W CHD1P32657 1468 aa10.45□□□□□ -0.74
MRPL28YDR462W ESP1Q03018 1630 aa10.41□□□□□ -0.74
MRPL28YDR462W MYO2P19524 1574 aaKnown RBP10.4□□□□□ -0.74
MRPL28YDR462W TAF2P23255 1407 aa10.35□□□□□ -0.75
MRPL28YDR462W MMS22Q06164 1454 aa10.35□□□□□ -0.75
MRPL28YDR462W KOG1P38873 1557 aa10.31□□□□□ -0.76
MRPL28YDR462W POL1P13382 1468 aa10.3□□□□□ -0.76
MRPL28YDR462W ATG2P53855 1592 aa10.28□□□□□ -0.76
MRPL28YDR462W BUD4P47136 1447 aa10.28□□□□□ -0.76
MRPL28YDR462W DNA2P38859 1522 aa10.28□□□□□ -0.76
MRPL28YDR462W YPK9Q12697 1472 aa10.25□□□□□ -0.77
MRPL28YDR462W STU1P38198 1513 aa10.25□□□□□ -0.77
MRPL28YDR462W YTA7P40340 1379 aa10.19□□□□□ -0.78
MRPL28YDR462W ECM5Q03214 1411 aa10.18□□□□□ -0.78
MRPL28YDR462W PEP1P32319 1579 aa10.16□□□□□ -0.78
MRPL28YDR462W SCC2Q04002 1493 aa10.12□□□□□ -0.79
MRPL28YDR462W RKR1Q04781 1562 aa10.11□□□□□ -0.79
MRPL28YDR462W YOR1P53049 1477 aa10.1□□□□□ -0.79
MRPL28YDR462W BPT1P14772 1559 aa10.1□□□□□ -0.79
MRPL28YDR462W MYO4P32492 1471 aa10.09□□□□□ -0.79
MRPL28YDR462W MTC1P47018 478 aaKnown RBP10.08□□□□□ -0.8
MRPL28YDR462W RPO31P04051 1460 aa10.08□□□□□ -0.8
MRPL28YDR462W MDS3P53094 1487 aa10.08□□□□□ -0.8
MRPL28YDR462W TOP2P06786 1428 aaKnown RBP10.03□□□□□ -0.8
MRPL28YDR462W SMC4Q12267 1418 aa10.03□□□□□ -0.8
MRPL28YDR462W UFD4P33202 1483 aa10.01□□□□□ -0.81
MRPL28YDR462W YCF1P39109 1515 aaKnown RBP10□□□□□ -0.81
MRPL28YDR462W TY2B-LR1P0C2J3 1770 aa9.97□□□□□ -0.81
MRPL28YDR462W TY2B-FP0CX63 1770 aa9.97□□□□□ -0.81
MRPL28YDR462W TY2B-GR2P0CX64 1770 aa9.97□□□□□ -0.81
MRPL28YDR462W TY2B-CP25384 1770 aa9.97□□□□□ -0.81
MRPL28YDR462W TY2B-DR2Q03494 1770 aa9.97□□□□□ -0.81
MRPL28YDR462W TY1B-DR1Q03855 1755 aa9.97□□□□□ -0.81
MRPL28YDR462W TY2B-DR3Q07791 1770 aaKnown RBP9.97□□□□□ -0.81
MRPL28YDR462W TY2B-OR1Q12113 1770 aa9.97□□□□□ -0.81
MRPL28YDR462W TY2B-DR1Q12472 1770 aa9.97□□□□□ -0.81
MRPL28YDR462W TY2B-OR2Q12501 1770 aa9.97□□□□□ -0.81
MRPL28YDR462W TRM732Q03496 1420 aa9.97□□□□□ -0.81
MRPL28YDR462W SAS10Q12136 610 aaPredicted RBP9.96□□□□□ -0.82
MRPL28YDR462W TY1B-DR3Q99231 1755 aa9.95□□□□□ -0.82
MRPL28YDR462W SNQ2P32568 1501 aaKnown RBP9.92□□□□□ -0.82
MRPL28YDR462W IKI3Q06706 1349 aaKnown RBP9.9□□□□□ -0.82
MRPL28YDR462W TAF7Q05021 590 aa9.9□□□□□ -0.82
MRPL28YDR462W TY2B-BQ12491 1770 aa9.89□□□□□ -0.83
MRPL28YDR462W NUP170P38181 1502 aa9.88□□□□□ -0.83
MRPL28YDR462W MLP2P40457 1679 aa9.86□□□□□ -0.83
MRPL28YDR462W STH1P32597 1359 aa9.85□□□□□ -0.83
MRPL28YDR462W RSE1Q04693 1361 aaKnown RBP9.84□□□□□ -0.83
MRPL28YDR462W TY1B-HO13535 1793 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-DR5P0C2I2 1755 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-DR6P0C2I3 1755 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-LR2P0C2I5 1755 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-LR3P0C2I6 1755 aaKnown RBP9.81□□□□□ -0.84
MRPL28YDR462W TY1B-PR1P0C2I9 1755 aaKnown RBP9.81□□□□□ -0.84
MRPL28YDR462W TY1B-PR2P0C2J0 1756 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-PR3P0C2J1 1755 aaKnown RBP9.81□□□□□ -0.84
MRPL28YDR462W TY1B-JR1P47098 1755 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-ML2Q03434 1755 aaKnown RBP9.81□□□□□ -0.84
MRPL28YDR462W TY1B-ER1Q03612 1755 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-ML1Q04711 1755 aaKnown RBP9.81□□□□□ -0.84
MRPL28YDR462W TY1B-GR2Q12269 1755 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-OLQ12273 1755 aa9.81□□□□□ -0.84
MRPL28YDR462W TY1B-PLQ12414 1755 aaKnown RBP9.81□□□□□ -0.84
MRPL28YDR462W PDR15Q04182 1529 aaKnown RBP9.8□□□□□ -0.84
MRPL28YDR462W TY1B-BRQ12193 1756 aa9.79□□□□□ -0.84
MRPL28YDR462W TY1B-GR3Q12316 1755 aa9.79□□□□□ -0.84
MRPL28YDR462W TY1B-ORQ92393 1755 aa9.79□□□□□ -0.84
MRPL28YDR462W ULS1Q08562 1619 aa9.78□□□□□ -0.84
MRPL28YDR462W SPP41P38904 1435 aa9.77□□□□□ -0.85
MRPL28YDR462W GEA1P47102 1408 aaPredicted RBP9.76□□□□□ -0.85
MRPL28YDR462W SSM4P40318 1319 aa9.72□□□□□ -0.85
MRPL28YDR462W VTH1P40438 1549 aa9.72□□□□□ -0.85
MRPL28YDR462W VTH2P40890 1549 aa9.72□□□□□ -0.85
MRPL28YDR462W TSC11P40061 1430 aa9.71□□□□□ -0.86
MRPL28YDR462W CDC25P04821 1589 aa9.68□□□□□ -0.86
MRPL28YDR462W SNT2P53127 1403 aa9.68□□□□□ -0.86
MRPL28YDR462W TY3B-GQ99315 1547 aa9.67□□□□□ -0.86
MRPL28YDR462W TY1B-JR2P47100 1755 aaKnown RBP9.66□□□□□ -0.86
MRPL28YDR462W TY1B-ER2Q03619 1755 aa9.66□□□□□ -0.86
MRPL28YDR462W TY1B-MR1Q04214 1755 aa9.66□□□□□ -0.86
MRPL28YDR462W TY1B-MR2Q04670 1755 aaKnown RBP9.66□□□□□ -0.86
MRPL28YDR462W TY1B-LR1Q12088 1755 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms