RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W FAP1P53971 965 aa5.9□□□□□ -1.46
SPC110YDR356W PRY3P47033 881 aa5.53□□□□□ -1.52
SPC110YDR356W HAA1Q12753 694 aaKnown RBP5.08□□□□□ -1.6
SPC110YDR356W BUD31P25337 157 aaPredicted RBP4.62□□□□□ -1.67
SPC110YDR356W AAD16Q02895 342 aa4.6□□□□□ -1.67
SPC110YDR356W SIS1P25294 352 aaKnown RBP4.59□□□□□ -1.68
SPC110YDR356W YCK3P39962 524 aa4.44□□□□□ -1.7
SPC110YDR356W YGL015CP33199 130 aa4.34□□□□□ -1.72
SPC110YDR356W PRI1P10363 409 aa4.15□□□□□ -1.75
SPC110YDR356W UBP9P39967 754 aa4.14□□□□□ -1.75
SPC110YDR356W MRPL32P25348 183 aa4.05□□□□□ -1.76
SPC110YDR356W TSR3Q12094 313 aaKnown RBP3.97□□□□□ -1.77
SPC110YDR356W ISW2Q08773 1120 aa3.77□□□□□ -1.81
SPC110YDR356W MTC1P47018 478 aaKnown RBP3.73□□□□□ -1.81
SPC110YDR356W YJL171CP46992 396 aa3.68□□□□□ -1.82
SPC110YDR356W RPG1P38249 964 aaKnown RBP3.64□□□□□ -1.83
SPC110YDR356W TIF4632P39936 914 aaKnown RBP3.56□□□□□ -1.84
SPC110YDR356W RGA2Q06407 1009 aa3.5□□□□□ -1.85
SPC110YDR356W UBP10P53874 792 aaPredicted RBP3.43□□□□□ -1.86
SPC110YDR356W TGL3P40308 642 aa3.34□□□□□ -1.88
SPC110YDR356W MAP2P38174 421 aaKnown RBP3.32□□□□□ -1.88
SPC110YDR356W BMT6Q12291 365 aa3.26□□□□□ -1.89
SPC110YDR356W SPP1Q03012 353 aa3.23□□□□□ -1.89
SPC110YDR356W RGA1P39083 1007 aa3.22□□□□□ -1.89
SPC110YDR356W YBL029C-AQ3E756 94 aa3.2□□□□□ -1.9
SPC110YDR356W SLX5P32828 619 aaKnown RBP3.19□□□□□ -1.9
SPC110YDR356W AIR2Q12476 344 aaKnown RBP3.12□□□□□ -1.91
SPC110YDR356W CDC27P38042 758 aa3.08□□□□□ -1.92
SPC110YDR356W REB1P21538 810 aa3.07□□□□□ -1.92
SPC110YDR356W FKH1P40466 484 aa3.06□□□□□ -1.92
SPC110YDR356W WSC3Q12215 556 aa3.06□□□□□ -1.92
SPC110YDR356W VNX1P42839 908 aa3.04□□□□□ -1.92
SPC110YDR356W SCY1P53009 804 aa3.04□□□□□ -1.92
SPC110YDR356W BCK2P33306 851 aa3.01□□□□□ -1.93
SPC110YDR356W YOR238WQ08634 303 aa2.98□□□□□ -1.93
SPC110YDR356W TIF11P38912 153 aaKnown RBP2.96□□□□□ -1.94
SPC110YDR356W GTT3P39996 337 aa2.94□□□□□ -1.94
SPC110YDR356W TFG1P41895 735 aaPredicted RBP2.9□□□□□ -1.95
SPC110YDR356W GBP2P25555 427 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
SPC110YDR356W LDB19Q12502 818 aa2.88□□□□□ -1.95
SPC110YDR356W AVT3P36062 692 aa2.87□□□□□ -1.95
SPC110YDR356W DPS1P04802 557 aaKnown RBP2.86□□□□□ -1.95
SPC110YDR356W ULI1P43604 169 aa2.85□□□□□ -1.95
SPC110YDR356W RSE1Q04693 1361 aaKnown RBP2.78□□□□□ -1.96
SPC110YDR356W NCR1Q12200 1170 aa2.77□□□□□ -1.97
SPC110YDR356W RPL17AP05740 184 aaKnown RBP2.77□□□□□ -1.97
SPC110YDR356W RPL17BP46990 184 aaKnown RBP2.77□□□□□ -1.97
SPC110YDR356W XDJ1P39102 459 aa2.74□□□□□ -1.97
SPC110YDR356W MST1P07236 462 aa2.74□□□□□ -1.97
SPC110YDR356W RQC2Q12532 1038 aaKnown RBP2.73□□□□□ -1.97
SPC110YDR356W MIF2P35201 549 aa2.72□□□□□ -1.97
SPC110YDR356W DRS1P32892 752 aaKnown RBP2.72□□□□□ -1.97
SPC110YDR356W CHL1P22516 861 aaPredicted RBP2.71□□□□□ -1.98
SPC110YDR356W RTG1P32607 177 aa2.71□□□□□ -1.98
SPC110YDR356W HOP09932 586 aa2.7□□□□□ -1.98
SPC110YDR356W EAP1P36041 632 aaKnown RBP2.67□□□□□ -1.98
SPC110YDR356W VRP1P37370 817 aa2.66□□□□□ -1.98
SPC110YDR356W YAP5P40574 245 aa2.66□□□□□ -1.98
SPC110YDR356W YPL062WQ02781 134 aa2.66□□□□□ -1.98
SPC110YDR356W DCD1P06773 312 aa2.64□□□□□ -1.99
SPC110YDR356W MON2P48563 1636 aaPredicted RBP2.63□□□□□ -1.99
SPC110YDR356W SAP30P38429 201 aa2.62□□□□□ -1.99
SPC110YDR356W PEX29Q03370 554 aa2.61□□□□□ -1.99
SPC110YDR356W TFC8Q12308 588 aa2.6□□□□□ -1.99
SPC110YDR356W IOC2Q12072 812 aa2.59□□□□□ -2
SPC110YDR356W PRE3P38624 215 aa2.57□□□□□ -2
SPC110YDR356W SEC61P32915 480 aa2.57□□□□□ -2
SPC110YDR356W YNL035CP53962 389 aaKnown RBP2.57□□□□□ -2
SPC110YDR356W SPA2P23201 1466 aaKnown RBP2.55□□□□□ -2
SPC110YDR356W YKR023WP36119 530 aaKnown RBP2.55□□□□□ -2
SPC110YDR356W GAR1P28007 205 aaKnown RBP2.54□□□□□ -2
SPC110YDR356W INO80P53115 1489 aa2.52□□□□□ -2.01
SPC110YDR356W DIP2Q12220 943 aaPredicted RBP2.5□□□□□ -2.01
SPC110YDR356W YFR006WP43590 535 aa2.5□□□□□ -2.01
SPC110YDR356W ELP4Q02884 456 aaKnown RBP2.5□□□□□ -2.01
SPC110YDR356W MSB4Q12317 492 aa2.5□□□□□ -2.01
SPC110YDR356W MTC5Q03897 1148 aa2.47□□□□□ -2.01
SPC110YDR356W TRK1P12685 1235 aa2.47□□□□□ -2.01
SPC110YDR356W TAF7Q05021 590 aa2.46□□□□□ -2.01
SPC110YDR356W YDL129WQ07555 291 aa2.46□□□□□ -2.01
SPC110YDR356W NSR1P27476 414 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SPC110YDR356W BCH2P36122 765 aa2.43□□□□□ -2.02
SPC110YDR356W SRC1Q03707 834 aa2.42□□□□□ -2.02
SPC110YDR356W TRP5P00931 707 aaKnown RBP2.42□□□□□ -2.02
SPC110YDR356W DNA2P38859 1522 aa2.41□□□□□ -2.02
SPC110YDR356W GCR2Q01722 534 aa2.38□□□□□ -2.03
SPC110YDR356W SET4P42948 560 aa2.37□□□□□ -2.03
SPC110YDR356W BBC1P47068 1157 aa2.36□□□□□ -2.03
SPC110YDR356W KOG1P38873 1557 aa2.33□□□□□ -2.04
SPC110YDR356W YIL055CP40523 627 aaKnown RBP2.33□□□□□ -2.04
SPC110YDR356W BFR2Q06631 534 aaKnown RBP2.32□□□□□ -2.04
SPC110YDR356W EPS1P40557 701 aa2.32□□□□□ -2.04
SPC110YDR356W AIM44Q99299 758 aa2.31□□□□□ -2.04
SPC110YDR356W JIP4Q03361 876 aa2.31□□□□□ -2.04
SPC110YDR356W TFA1P36100 482 aa2.3□□□□□ -2.04
SPC110YDR356W PTP3P40048 928 aa2.3□□□□□ -2.04
SPC110YDR356W PIB1Q06651 286 aa2.3□□□□□ -2.04
SPC110YDR356W BDF1P35817 686 aa2.29□□□□□ -2.04
SPC110YDR356W YOL036WQ08206 761 aa2.27□□□□□ -2.05
SPC110YDR356W SPT21P35209 758 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms