RNA–Protein interactions for RNA: YDR003W

RCR2, Transcript of Vacuolar protein, yeastyeast

Gene RCR2, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCR2YDR003W MTC1P47018 478 aaKnown RBP16.08■□□□□ 0.16
RCR2YDR003W FAP1P53971 965 aa15.55■□□□□ 0.08
RCR2YDR003W PRY3P47033 881 aa14.67□□□□□ -0.06
RCR2YDR003W DRS1P32892 752 aaKnown RBP14.13□□□□□ -0.15
RCR2YDR003W AAD16Q02895 342 aa14.11□□□□□ -0.15
RCR2YDR003W PRI1P10363 409 aa14.09□□□□□ -0.15
RCR2YDR003W YCK3P39962 524 aa13.88□□□□□ -0.19
RCR2YDR003W HAA1Q12753 694 aaKnown RBP13.63□□□□□ -0.23
RCR2YDR003W ISW2Q08773 1120 aa13.5□□□□□ -0.25
RCR2YDR003W RPG1P38249 964 aaKnown RBP13.45□□□□□ -0.26
RCR2YDR003W TSR3Q12094 313 aaKnown RBP13.32□□□□□ -0.28
RCR2YDR003W MRPL32P25348 183 aa12.73□□□□□ -0.37
RCR2YDR003W DIP2Q12220 943 aaPredicted RBP12.72□□□□□ -0.37
RCR2YDR003W RSE1Q04693 1361 aaKnown RBP12.52□□□□□ -0.41
RCR2YDR003W YGL015CP33199 130 aa12.43□□□□□ -0.42
RCR2YDR003W REB1P21538 810 aa12.23□□□□□ -0.45
RCR2YDR003W RPL17AP05740 184 aaKnown RBP12.22□□□□□ -0.45
RCR2YDR003W RPL17BP46990 184 aaKnown RBP12.22□□□□□ -0.45
RCR2YDR003W CDC27P38042 758 aa12□□□□□ -0.49
RCR2YDR003W AVT3P36062 692 aa11.99□□□□□ -0.49
RCR2YDR003W BUD31P25337 157 aaPredicted RBP11.82□□□□□ -0.52
RCR2YDR003W YKR023WP36119 530 aaKnown RBP11.73□□□□□ -0.53
RCR2YDR003W MAP2P38174 421 aaKnown RBP11.72□□□□□ -0.53
RCR2YDR003W UBP10P53874 792 aaPredicted RBP11.67□□□□□ -0.54
RCR2YDR003W SPT21P35209 758 aa11.62□□□□□ -0.55
RCR2YDR003W DCD1P06773 312 aa11.53□□□□□ -0.56
RCR2YDR003W HOP09932 586 aa11.52□□□□□ -0.57
RCR2YDR003W TFC8Q12308 588 aa11.46□□□□□ -0.57
RCR2YDR003W SCY1P53009 804 aa11.31□□□□□ -0.6
RCR2YDR003W BFR2Q06631 534 aaKnown RBP11.3□□□□□ -0.6
RCR2YDR003W TIF4632P39936 914 aaKnown RBP11.19□□□□□ -0.62
RCR2YDR003W SIS1P25294 352 aaKnown RBP11.18□□□□□ -0.62
RCR2YDR003W SLX5P32828 619 aaKnown RBP11.17□□□□□ -0.62
RCR2YDR003W TGL3P40308 642 aa11.17□□□□□ -0.62
RCR2YDR003W BCH2P36122 765 aa11.08□□□□□ -0.64
RCR2YDR003W UBP9P39967 754 aa11.08□□□□□ -0.64
RCR2YDR003W RIM101P33400 625 aa10.99□□□□□ -0.65
RCR2YDR003W EPS1P40557 701 aa10.72□□□□□ -0.69
RCR2YDR003W BDF1P35817 686 aa10.7□□□□□ -0.7
RCR2YDR003W YBL029C-AQ3E756 94 aa10.65□□□□□ -0.7
RCR2YDR003W OXP1P28273 1286 aa10.64□□□□□ -0.71
RCR2YDR003W MST1P07236 462 aa10.6□□□□□ -0.71
RCR2YDR003W YOR238WQ08634 303 aa10.52□□□□□ -0.73
RCR2YDR003W PTP3P40048 928 aa10.5□□□□□ -0.73
RCR2YDR003W VNX1P42839 908 aa10.45□□□□□ -0.74
RCR2YDR003W YIL055CP40523 627 aaKnown RBP10.43□□□□□ -0.74
RCR2YDR003W NSR1P27476 414 aaKnown RBP RIP-Chip data10.37□□□□□ -0.75 RIP-Chip
RCR2YDR003W SPP1Q03012 353 aa10.35□□□□□ -0.75
RCR2YDR003W WSC3Q12215 556 aa10.35□□□□□ -0.75
RCR2YDR003W YAP5P40574 245 aa10.32□□□□□ -0.76
RCR2YDR003W BBC1P47068 1157 aa10.31□□□□□ -0.76
RCR2YDR003W AI2P03876 854 aa10.29□□□□□ -0.76
RCR2YDR003W RSM7P47150 247 aa10.29□□□□□ -0.76
RCR2YDR003W AIR2Q12476 344 aaKnown RBP10.23□□□□□ -0.77
RCR2YDR003W YAH1Q12184 172 aaKnown RBP10.22□□□□□ -0.77
RCR2YDR003W TIF11P38912 153 aaKnown RBP10.17□□□□□ -0.78
RCR2YDR003W FKH1P40466 484 aa10.17□□□□□ -0.78
RCR2YDR003W YJL171CP46992 396 aa10.14□□□□□ -0.79
RCR2YDR003W GTT3P39996 337 aa10.13□□□□□ -0.79
RCR2YDR003W PIB1Q06651 286 aa10.07□□□□□ -0.8
RCR2YDR003W LDB19Q12502 818 aa10.05□□□□□ -0.8
RCR2YDR003W ULI1P43604 169 aa10.01□□□□□ -0.81
RCR2YDR003W YLR271WQ06152 274 aa9.99□□□□□ -0.81
RCR2YDR003W IOC2Q12072 812 aa9.99□□□□□ -0.81
RCR2YDR003W BMT6Q12291 365 aa9.94□□□□□ -0.82
RCR2YDR003W PSD2P53037 1138 aaKnown RBP9.92□□□□□ -0.82
RCR2YDR003W MRM1P25270 412 aa9.89□□□□□ -0.83
RCR2YDR003W SET4P42948 560 aa9.8□□□□□ -0.84
RCR2YDR003W MSB4Q12317 492 aa9.8□□□□□ -0.84
RCR2YDR003W RTG1P32607 177 aa9.78□□□□□ -0.84
RCR2YDR003W YOL036WQ08206 761 aa9.78□□□□□ -0.84
RCR2YDR003W EAP1P36041 632 aaKnown RBP9.77□□□□□ -0.85
RCR2YDR003W TRP5P00931 707 aaKnown RBP9.76□□□□□ -0.85
RCR2YDR003W NCR1Q12200 1170 aa9.72□□□□□ -0.85
RCR2YDR003W YFR006WP43590 535 aa9.69□□□□□ -0.86
RCR2YDR003W DBP1P24784 617 aaKnown RBP9.68□□□□□ -0.86
RCR2YDR003W VPS29P38759 282 aa9.67□□□□□ -0.86
RCR2YDR003W YMR1P47147 688 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
RCR2YDR003W YNL035CP53962 389 aaKnown RBP9.65□□□□□ -0.86
RCR2YDR003W VMA1P17255 1071 aaKnown RBP9.62□□□□□ -0.87
RCR2YDR003W SEC61P32915 480 aa9.62□□□□□ -0.87
RCR2YDR003W STS1P38637 319 aa9.62□□□□□ -0.87
RCR2YDR003W CST9Q06032 482 aa9.61□□□□□ -0.87
RCR2YDR003W SSP1P38871 571 aa9.57□□□□□ -0.88
RCR2YDR003W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
RCR2YDR003W RTG3P38165 486 aa9.56□□□□□ -0.88
RCR2YDR003W SAM3Q08986 587 aa9.56□□□□□ -0.88
RCR2YDR003W TFA1P36100 482 aa9.55□□□□□ -0.88
RCR2YDR003W SAP30P38429 201 aa9.52□□□□□ -0.89
RCR2YDR003W TFG1P41895 735 aaPredicted RBP9.5□□□□□ -0.89
RCR2YDR003W RCR1P38212 213 aa9.49□□□□□ -0.89
RCR2YDR003W DAN4P47179 1161 aa9.49□□□□□ -0.89
RCR2YDR003W INO80P53115 1489 aa9.48□□□□□ -0.89
RCR2YDR003W MGA2P40578 1113 aa9.44□□□□□ -0.9
RCR2YDR003W BCK2P33306 851 aa9.43□□□□□ -0.9
RCR2YDR003W JIP4Q03361 876 aa9.41□□□□□ -0.9
RCR2YDR003W YDL129WQ07555 291 aa9.41□□□□□ -0.9
RCR2YDR003W GYP5Q12344 894 aa9.41□□□□□ -0.9
RCR2YDR003W MON2P48563 1636 aaPredicted RBP9.39□□□□□ -0.91
RCR2YDR003W CHL1P22516 861 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms