RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C FAP1P53971 965 aa11.65□□□□□ -0.54
PRP11YDL043C MTC1P47018 478 aaKnown RBP11.55□□□□□ -0.56
PRP11YDL043C PRY3P47033 881 aa11□□□□□ -0.65
PRP11YDL043C AAD16Q02895 342 aa10.45□□□□□ -0.74
PRP11YDL043C YCK3P39962 524 aa10.39□□□□□ -0.75
PRP11YDL043C PRI1P10363 409 aa10.37□□□□□ -0.75
PRP11YDL043C HAA1Q12753 694 aaKnown RBP10.25□□□□□ -0.77
PRP11YDL043C DRS1P32892 752 aaKnown RBP10.14□□□□□ -0.79
PRP11YDL043C ISW2Q08773 1120 aa9.81□□□□□ -0.84
PRP11YDL043C RPG1P38249 964 aaKnown RBP9.75□□□□□ -0.85
PRP11YDL043C TSR3Q12094 313 aaKnown RBP9.75□□□□□ -0.85
PRP11YDL043C MRPL32P25348 183 aa9.36□□□□□ -0.91
PRP11YDL043C YGL015CP33199 130 aa9.29□□□□□ -0.92
PRP11YDL043C BUD31P25337 157 aaPredicted RBP9.01□□□□□ -0.97
PRP11YDL043C BFR2Q06631 534 aaKnown RBP8.98□□□□□ -0.97
PRP11YDL043C RSE1Q04693 1361 aaKnown RBP8.89□□□□□ -0.99
PRP11YDL043C DIP2Q12220 943 aaPredicted RBP8.89□□□□□ -0.99
PRP11YDL043C TFA1P36100 482 aa8.8□□□□□ -1
PRP11YDL043C REB1P21538 810 aa8.74□□□□□ -1.01
PRP11YDL043C CDC27P38042 758 aa8.71□□□□□ -1.02
PRP11YDL043C RPL17AP05740 184 aaKnown RBP8.69□□□□□ -1.02
PRP11YDL043C RPL17BP46990 184 aaKnown RBP8.69□□□□□ -1.02
PRP11YDL043C UBP10P53874 792 aaPredicted RBP8.59□□□□□ -1.03
PRP11YDL043C MAP2P38174 421 aaKnown RBP8.56□□□□□ -1.04
PRP11YDL043C AVT3P36062 692 aa8.5□□□□□ -1.05
PRP11YDL043C SIS1P25294 352 aaKnown RBP8.46□□□□□ -1.06
PRP11YDL043C YKR023WP36119 530 aaKnown RBP8.42□□□□□ -1.06
PRP11YDL043C UBP9P39967 754 aa8.31□□□□□ -1.08
PRP11YDL043C DCD1P06773 312 aa8.24□□□□□ -1.09
PRP11YDL043C HOP09932 586 aa8.24□□□□□ -1.09
PRP11YDL043C SPT21P35209 758 aa8.24□□□□□ -1.09
PRP11YDL043C TIF4632P39936 914 aaKnown RBP8.24□□□□□ -1.09
PRP11YDL043C TGL3P40308 642 aa8.24□□□□□ -1.09
PRP11YDL043C TFC8Q12308 588 aa8.24□□□□□ -1.09
PRP11YDL043C SCY1P53009 804 aa8.19□□□□□ -1.1
PRP11YDL043C SLX5P32828 619 aaKnown RBP8.14□□□□□ -1.11
PRP11YDL043C RQC2Q12532 1038 aaKnown RBP7.97□□□□□ -1.13
PRP11YDL043C BCH2P36122 765 aa7.93□□□□□ -1.14
PRP11YDL043C YBL029C-AQ3E756 94 aa7.81□□□□□ -1.16
PRP11YDL043C MST1P07236 462 aa7.77□□□□□ -1.17
PRP11YDL043C RIM101P33400 625 aa7.72□□□□□ -1.17
PRP11YDL043C VNX1P42839 908 aa7.69□□□□□ -1.18
PRP11YDL043C YOR238WQ08634 303 aa7.67□□□□□ -1.18
PRP11YDL043C BDF1P35817 686 aa7.65□□□□□ -1.18
PRP11YDL043C EPS1P40557 701 aa7.64□□□□□ -1.19
PRP11YDL043C SPP1Q03012 353 aa7.6□□□□□ -1.19
PRP11YDL043C AIR2Q12476 344 aaKnown RBP7.58□□□□□ -1.2
PRP11YDL043C YJL171CP46992 396 aa7.54□□□□□ -1.2
PRP11YDL043C NSR1P27476 414 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
PRP11YDL043C FKH1P40466 484 aa7.51□□□□□ -1.21
PRP11YDL043C WSC3Q12215 556 aa7.51□□□□□ -1.21
PRP11YDL043C YAP5P40574 245 aa7.46□□□□□ -1.22
PRP11YDL043C TIF11P38912 153 aaKnown RBP7.45□□□□□ -1.22
PRP11YDL043C OXP1P28273 1286 aa7.43□□□□□ -1.22
PRP11YDL043C DMA1P38823 416 aa7.41□□□□□ -1.22
PRP11YDL043C BMT6Q12291 365 aa7.35□□□□□ -1.23
PRP11YDL043C LDB19Q12502 818 aa7.35□□□□□ -1.23
PRP11YDL043C PTP3P40048 928 aa7.34□□□□□ -1.23
PRP11YDL043C GTT3P39996 337 aa7.31□□□□□ -1.24
PRP11YDL043C IOC2Q12072 812 aa7.3□□□□□ -1.24
PRP11YDL043C YIL055CP40523 627 aaKnown RBP7.29□□□□□ -1.24
PRP11YDL043C ULI1P43604 169 aa7.29□□□□□ -1.24
PRP11YDL043C BBC1P47068 1157 aa7.29□□□□□ -1.24
PRP11YDL043C AI2P03876 854 aa7.23□□□□□ -1.25
PRP11YDL043C SSP1P38871 571 aa7.21□□□□□ -1.26
PRP11YDL043C RSM7P47150 247 aa7.2□□□□□ -1.26
PRP11YDL043C TAF7Q05021 590 aa7.15□□□□□ -1.26
PRP11YDL043C PIB1Q06651 286 aa7.14□□□□□ -1.27
PRP11YDL043C RTG1P32607 177 aa7.11□□□□□ -1.27
PRP11YDL043C MSB4Q12317 492 aa7.11□□□□□ -1.27
PRP11YDL043C EAP1P36041 632 aaKnown RBP7.1□□□□□ -1.27
PRP11YDL043C NCR1Q12200 1170 aa7.1□□□□□ -1.27
PRP11YDL043C TRP5P00931 707 aaKnown RBP7.05□□□□□ -1.28
PRP11YDL043C YAH1Q12184 172 aaKnown RBP7.04□□□□□ -1.28
PRP11YDL043C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
PRP11YDL043C LEO1P38439 464 aa7.02□□□□□ -1.29
PRP11YDL043C SEC61P32915 480 aa7.01□□□□□ -1.29
PRP11YDL043C SET4P42948 560 aa7.01□□□□□ -1.29
PRP11YDL043C YNL035CP53962 389 aaKnown RBP7.01□□□□□ -1.29
PRP11YDL043C YOL036WQ08206 761 aa7.01□□□□□ -1.29
PRP11YDL043C YLR271WQ06152 274 aa6.99□□□□□ -1.29
PRP11YDL043C BCK2P33306 851 aa6.97□□□□□ -1.29
PRP11YDL043C MRM1P25270 412 aa6.91□□□□□ -1.3
PRP11YDL043C PSD2P53037 1138 aaKnown RBP6.91□□□□□ -1.3
PRP11YDL043C MGA2P40578 1113 aa6.9□□□□□ -1.3
PRP11YDL043C TFG1P41895 735 aaPredicted RBP6.9□□□□□ -1.3
PRP11YDL043C SAP30P38429 201 aa6.89□□□□□ -1.31
PRP11YDL043C SAS10Q12136 610 aaPredicted RBP6.89□□□□□ -1.31
PRP11YDL043C CHL1P22516 861 aaPredicted RBP6.88□□□□□ -1.31
PRP11YDL043C LEU3P08638 886 aa6.84□□□□□ -1.31
PRP11YDL043C DAN4P47179 1161 aa6.84□□□□□ -1.31
PRP11YDL043C DBP1P24784 617 aaKnown RBP6.83□□□□□ -1.32
PRP11YDL043C VMA1P17255 1071 aaKnown RBP6.82□□□□□ -1.32
PRP11YDL043C PRE3P38624 215 aa6.82□□□□□ -1.32
PRP11YDL043C YMR1P47147 688 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
PRP11YDL043C SAM3Q08986 587 aa6.82□□□□□ -1.32
PRP11YDL043C YDL129WQ07555 291 aa6.81□□□□□ -1.32
PRP11YDL043C YFR006WP43590 535 aa6.8□□□□□ -1.32
PRP11YDL043C VPS29P38759 282 aa6.79□□□□□ -1.32
PRP11YDL043C JIP4Q03361 876 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms