RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W MTC1P47018 478 aaKnown RBP13.39□□□□□ -0.27
RPT2YDL007W DRS1P32892 752 aaKnown RBP13.13□□□□□ -0.31
RPT2YDL007W FAP1P53971 965 aa11.35□□□□□ -0.59
RPT2YDL007W DIP2Q12220 943 aaPredicted RBP11.29□□□□□ -0.6
RPT2YDL007W BFR2Q06631 534 aaKnown RBP11.25□□□□□ -0.61
RPT2YDL007W ISW2Q08773 1120 aa11.05□□□□□ -0.64
RPT2YDL007W AVT3P36062 692 aa11.01□□□□□ -0.65
RPT2YDL007W PRI1P10363 409 aa10.9□□□□□ -0.66
RPT2YDL007W RPG1P38249 964 aaKnown RBP10.81□□□□□ -0.68
RPT2YDL007W AAD16Q02895 342 aa10.8□□□□□ -0.68
RPT2YDL007W RSE1Q04693 1361 aaKnown RBP10.78□□□□□ -0.68
RPT2YDL007W PRY3P47033 881 aa10.58□□□□□ -0.71
RPT2YDL007W INO80P53115 1489 aa10.56□□□□□ -0.72
RPT2YDL007W MON2P48563 1636 aaPredicted RBP10.45□□□□□ -0.74
RPT2YDL007W TFA1P36100 482 aa10.37□□□□□ -0.75
RPT2YDL007W RPL17AP05740 184 aaKnown RBP10.33□□□□□ -0.76
RPT2YDL007W RPL17BP46990 184 aaKnown RBP10.33□□□□□ -0.76
RPT2YDL007W REB1P21538 810 aa10.32□□□□□ -0.76
RPT2YDL007W TSR3Q12094 313 aaKnown RBP10.29□□□□□ -0.76
RPT2YDL007W HAA1Q12753 694 aaKnown RBP10.07□□□□□ -0.8
RPT2YDL007W MRPL32P25348 183 aa10.02□□□□□ -0.81
RPT2YDL007W DNA2P38859 1522 aa9.95□□□□□ -0.82
RPT2YDL007W SPT21P35209 758 aa9.88□□□□□ -0.83
RPT2YDL007W YCK3P39962 524 aa9.82□□□□□ -0.84
RPT2YDL007W KOG1P38873 1557 aa9.77□□□□□ -0.85
RPT2YDL007W RIM101P33400 625 aa9.72□□□□□ -0.85
RPT2YDL007W YKR023WP36119 530 aaKnown RBP9.61□□□□□ -0.87
RPT2YDL007W SWR1Q05471 1514 aa9.57□□□□□ -0.88
RPT2YDL007W SPA2P23201 1466 aaKnown RBP9.56□□□□□ -0.88
RPT2YDL007W TFC8Q12308 588 aa9.47□□□□□ -0.89
RPT2YDL007W YGL015CP33199 130 aa9.46□□□□□ -0.9
RPT2YDL007W CDC27P38042 758 aa9.46□□□□□ -0.9
RPT2YDL007W HOP09932 586 aa9.42□□□□□ -0.9
RPT2YDL007W YIL055CP40523 627 aaKnown RBP9.39□□□□□ -0.91
RPT2YDL007W MIF2P35201 549 aa9.36□□□□□ -0.91
RPT2YDL007W OXP1P28273 1286 aa9.34□□□□□ -0.91
RPT2YDL007W DCD1P06773 312 aa9.31□□□□□ -0.92
RPT2YDL007W PTP3P40048 928 aa9.31□□□□□ -0.92
RPT2YDL007W UBP10P53874 792 aaPredicted RBP9.3□□□□□ -0.92
RPT2YDL007W SSP1P38871 571 aa9.21□□□□□ -0.94
RPT2YDL007W YAH1Q12184 172 aaKnown RBP9.21□□□□□ -0.94
RPT2YDL007W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
RPT2YDL007W RSM7P47150 247 aa9.18□□□□□ -0.94
RPT2YDL007W BCH2P36122 765 aa9.16□□□□□ -0.94
RPT2YDL007W MAP2P38174 421 aaKnown RBP9.14□□□□□ -0.95
RPT2YDL007W RQC2Q12532 1038 aaKnown RBP9.14□□□□□ -0.95
RPT2YDL007W BBC1P47068 1157 aa9.1□□□□□ -0.95
RPT2YDL007W SCY1P53009 804 aa9.1□□□□□ -0.95
RPT2YDL007W TCB3Q03640 1545 aaKnown RBP9.07□□□□□ -0.96
RPT2YDL007W YLR271WQ06152 274 aa9.06□□□□□ -0.96
RPT2YDL007W TY1B-DR4Q07793 1604 aa9.04□□□□□ -0.96
RPT2YDL007W AI2P03876 854 aa9.03□□□□□ -0.96
RPT2YDL007W SLX5P32828 619 aaKnown RBP9.03□□□□□ -0.96
RPT2YDL007W EPS1P40557 701 aa9.01□□□□□ -0.97
RPT2YDL007W TIF4632P39936 914 aaKnown RBP8.98□□□□□ -0.97
RPT2YDL007W BDF1P35817 686 aa8.95□□□□□ -0.98
RPT2YDL007W MGA2P40578 1113 aa8.93□□□□□ -0.98
RPT2YDL007W YFR006WP43590 535 aa8.93□□□□□ -0.98
RPT2YDL007W PSD2P53037 1138 aaKnown RBP8.88□□□□□ -0.99
RPT2YDL007W TGL3P40308 642 aa8.85□□□□□ -0.99
RPT2YDL007W ECM5Q03214 1411 aa8.84□□□□□ -0.99
RPT2YDL007W REV3P14284 1504 aa8.75□□□□□ -1.01
RPT2YDL007W CST9Q06032 482 aa8.75□□□□□ -1.01
RPT2YDL007W DMA1P38823 416 aa8.73□□□□□ -1.01
RPT2YDL007W MRM1P25270 412 aa8.72□□□□□ -1.01
RPT2YDL007W NSR1P27476 414 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
RPT2YDL007W BUD4P47136 1447 aa8.67□□□□□ -1.02
RPT2YDL007W RTG3P38165 486 aa8.65□□□□□ -1.02
RPT2YDL007W THO2P53552 1597 aaKnown RBP8.64□□□□□ -1.03
RPT2YDL007W MDS3P53094 1487 aa8.63□□□□□ -1.03
RPT2YDL007W YAP5P40574 245 aa8.62□□□□□ -1.03
RPT2YDL007W SPT6P23615 1451 aaKnown RBP8.62□□□□□ -1.03
RPT2YDL007W ABP1P15891 592 aaKnown RBP8.6□□□□□ -1.03
RPT2YDL007W YOR238WQ08634 303 aa8.58□□□□□ -1.04
RPT2YDL007W HSL1P34244 1518 aa8.54□□□□□ -1.04
RPT2YDL007W YMR1P47147 688 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
RPT2YDL007W BPT1P14772 1559 aa8.53□□□□□ -1.04
RPT2YDL007W MST1P07236 462 aa8.52□□□□□ -1.05
RPT2YDL007W VPS29P38759 282 aa8.48□□□□□ -1.05
RPT2YDL007W UBP9P39967 754 aa8.48□□□□□ -1.05
RPT2YDL007W PEP1P32319 1579 aa8.46□□□□□ -1.06
RPT2YDL007W RCR1P38212 213 aa8.44□□□□□ -1.06
RPT2YDL007W GTT3P39996 337 aa8.44□□□□□ -1.06
RPT2YDL007W MAK11P20484 414 aaKnown RBP8.43□□□□□ -1.06
RPT2YDL007W DBP1P24784 617 aaKnown RBP8.43□□□□□ -1.06
RPT2YDL007W RAM2P29703 316 aa8.41□□□□□ -1.06
RPT2YDL007W LTE1P07866 1435 aa8.37□□□□□ -1.07
RPT2YDL007W STS1P38637 319 aa8.35□□□□□ -1.07
RPT2YDL007W TAF2P23255 1407 aa8.35□□□□□ -1.07
RPT2YDL007W YCF1P39109 1515 aaKnown RBP8.34□□□□□ -1.07
RPT2YDL007W PIB1Q06651 286 aa8.34□□□□□ -1.07
RPT2YDL007W HIR3P47171 1648 aa8.32□□□□□ -1.08
RPT2YDL007W BUD31P25337 157 aaPredicted RBP8.31□□□□□ -1.08
RPT2YDL007W NOP53Q12080 455 aaKnown RBP8.31□□□□□ -1.08
RPT2YDL007W MYO2P19524 1574 aaKnown RBP8.31□□□□□ -1.08
RPT2YDL007W VMA1P17255 1071 aaKnown RBP8.29□□□□□ -1.08
RPT2YDL007W MSB4Q12317 492 aa8.28□□□□□ -1.08
RPT2YDL007W COQ8P27697 501 aa8.27□□□□□ -1.09
RPT2YDL007W SGS1P35187 1447 aa8.27□□□□□ -1.09
RPT2YDL007W MET5P47169 1442 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 180.3 ms