RNA–Protein interactions for RNA: YCR049C

YCR049C, Transcript of Dubious open reading frame, yeastyeast

Gene YCR049C, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCR049CYCR049C DRS1P32892 752 aaKnown RBP17.36■□□□□ 0.37
YCR049CYCR049C MTC1P47018 478 aaKnown RBP16.7■□□□□ 0.26
YCR049CYCR049C BFR2Q06631 534 aaKnown RBP15.29■□□□□ 0.04
YCR049CYCR049C TFA1P36100 482 aa14.85□□□□□ -0.03
YCR049CYCR049C DIP2Q12220 943 aaPredicted RBP14.59□□□□□ -0.07
YCR049CYCR049C AVT3P36062 692 aa14.58□□□□□ -0.08
YCR049CYCR049C RSE1Q04693 1361 aaKnown RBP13.61□□□□□ -0.23
YCR049CYCR049C ISW2Q08773 1120 aa13.45□□□□□ -0.26
YCR049CYCR049C MON2P48563 1636 aaPredicted RBP13.31□□□□□ -0.28
YCR049CYCR049C RQC2Q12532 1038 aaKnown RBP13.26□□□□□ -0.29
YCR049CYCR049C RPG1P38249 964 aaKnown RBP13.24□□□□□ -0.29
YCR049CYCR049C INO80P53115 1489 aa13.17□□□□□ -0.3
YCR049CYCR049C PRI1P10363 409 aa13.06□□□□□ -0.32
YCR049CYCR049C RPL17AP05740 184 aaKnown RBP13.05□□□□□ -0.32
YCR049CYCR049C RPL17BP46990 184 aaKnown RBP13.05□□□□□ -0.32
YCR049CYCR049C FAP1P53971 965 aa12.96□□□□□ -0.33
YCR049CYCR049C REB1P21538 810 aa12.83□□□□□ -0.36
YCR049CYCR049C TCB3Q03640 1545 aaKnown RBP12.78□□□□□ -0.36
YCR049CYCR049C AAD16Q02895 342 aa12.76□□□□□ -0.37
YCR049CYCR049C TY1B-DR4Q07793 1604 aa12.73□□□□□ -0.37
YCR049CYCR049C SWR1Q05471 1514 aa12.72□□□□□ -0.37
YCR049CYCR049C SGS1P35187 1447 aa12.7□□□□□ -0.38
YCR049CYCR049C SPT21P35209 758 aa12.63□□□□□ -0.39
YCR049CYCR049C RIM101P33400 625 aa12.62□□□□□ -0.39
YCR049CYCR049C DNA2P38859 1522 aa12.6□□□□□ -0.39
YCR049CYCR049C PTP3P40048 928 aa12.5□□□□□ -0.41
YCR049CYCR049C KOG1P38873 1557 aa12.48□□□□□ -0.41
YCR049CYCR049C DMA1P38823 416 aa12.44□□□□□ -0.42
YCR049CYCR049C TSR3Q12094 313 aaKnown RBP12.43□□□□□ -0.42
YCR049CYCR049C HSL1P34244 1518 aa12.32□□□□□ -0.44
YCR049CYCR049C SSP1P38871 571 aa12.32□□□□□ -0.44
YCR049CYCR049C SPT6P23615 1451 aaKnown RBP12.27□□□□□ -0.44
YCR049CYCR049C OXP1P28273 1286 aa12.23□□□□□ -0.45
YCR049CYCR049C SPA2P23201 1466 aaKnown RBP12.12□□□□□ -0.47
YCR049CYCR049C PRY3P47033 881 aa12.09□□□□□ -0.47
YCR049CYCR049C YAH1Q12184 172 aaKnown RBP12.09□□□□□ -0.47
YCR049CYCR049C SSN2P38931 1420 aa12.09□□□□□ -0.47
YCR049CYCR049C YKR023WP36119 530 aaKnown RBP12.08□□□□□ -0.48
YCR049CYCR049C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.07□□□□□ -0.48not detected
YCR049CYCR049C HIR3P47171 1648 aa12.05□□□□□ -0.48
YCR049CYCR049C YIL055CP40523 627 aaKnown RBP12.05□□□□□ -0.48
YCR049CYCR049C YLR271WQ06152 274 aa11.99□□□□□ -0.49
YCR049CYCR049C MRPL32P25348 183 aa11.96□□□□□ -0.49
YCR049CYCR049C THO2P53552 1597 aaKnown RBP11.91□□□□□ -0.5
YCR049CYCR049C ECM5Q03214 1411 aa11.88□□□□□ -0.51
YCR049CYCR049C RSM7P47150 247 aa11.88□□□□□ -0.51
YCR049CYCR049C BUD4P47136 1447 aa11.87□□□□□ -0.51
YCR049CYCR049C TFC8Q12308 588 aa11.84□□□□□ -0.51
YCR049CYCR049C MGA2P40578 1113 aa11.82□□□□□ -0.52
YCR049CYCR049C XRN1P22147 1528 aaKnown RBP11.81□□□□□ -0.52
YCR049CYCR049C HOP09932 586 aa11.81□□□□□ -0.52
YCR049CYCR049C MDS3P53094 1487 aa11.75□□□□□ -0.53
YCR049CYCR049C TAF7Q05021 590 aa11.69□□□□□ -0.54
YCR049CYCR049C PEP1P32319 1579 aa11.68□□□□□ -0.54
YCR049CYCR049C DCD1P06773 312 aa11.68□□□□□ -0.54
YCR049CYCR049C LEO1P38439 464 aa11.67□□□□□ -0.54
YCR049CYCR049C CDC27P38042 758 aa11.66□□□□□ -0.54
YCR049CYCR049C REV3P14284 1504 aa11.65□□□□□ -0.55
YCR049CYCR049C CST9Q06032 482 aa11.64□□□□□ -0.55
YCR049CYCR049C ATG2P53855 1592 aa11.63□□□□□ -0.55
YCR049CYCR049C SAS10Q12136 610 aaPredicted RBP11.63□□□□□ -0.55
YCR049CYCR049C AI2P03876 854 aa11.61□□□□□ -0.55
YCR049CYCR049C PSD2P53037 1138 aaKnown RBP11.61□□□□□ -0.55
YCR049CYCR049C SIN3P22579 1536 aa11.57□□□□□ -0.56
YCR049CYCR049C BCH2P36122 765 aa11.51□□□□□ -0.57
YCR049CYCR049C BBC1P47068 1157 aa11.5□□□□□ -0.57
YCR049CYCR049C HAA1Q12753 694 aaKnown RBP11.5□□□□□ -0.57
YCR049CYCR049C YCK3P39962 524 aa11.49□□□□□ -0.57
YCR049CYCR049C LEU3P08638 886 aa11.47□□□□□ -0.57
YCR049CYCR049C SSK2P53599 1579 aa11.46□□□□□ -0.57
YCR049CYCR049C BPT1P14772 1559 aa11.39□□□□□ -0.59
YCR049CYCR049C TAF2P23255 1407 aa11.39□□□□□ -0.59
YCR049CYCR049C SKI3P17883 1432 aaKnown RBP11.37□□□□□ -0.59
YCR049CYCR049C ESP1Q03018 1630 aa11.36□□□□□ -0.59
YCR049CYCR049C EPS1P40557 701 aa11.36□□□□□ -0.59
YCR049CYCR049C RAM2P29703 316 aa11.33□□□□□ -0.6
YCR049CYCR049C MRM1P25270 412 aa11.27□□□□□ -0.61
YCR049CYCR049C BDF1P35817 686 aa11.27□□□□□ -0.61
YCR049CYCR049C YPK9Q12697 1472 aa11.25□□□□□ -0.61
YCR049CYCR049C MYO2P19524 1574 aaKnown RBP11.24□□□□□ -0.61
YCR049CYCR049C YCF1P39109 1515 aaKnown RBP11.23□□□□□ -0.61
YCR049CYCR049C SET1P38827 1080 aaKnown RBP11.22□□□□□ -0.61
YCR049CYCR049C SCC2Q04002 1493 aa11.2□□□□□ -0.62
YCR049CYCR049C UFD4P33202 1483 aa11.19□□□□□ -0.62
YCR049CYCR049C SCY1P53009 804 aa11.19□□□□□ -0.62
YCR049CYCR049C RTG3P38165 486 aa11.18□□□□□ -0.62
YCR049CYCR049C RCR1P38212 213 aa11.17□□□□□ -0.62
YCR049CYCR049C YPR148CQ06523 435 aa11.16□□□□□ -0.62
YCR049CYCR049C RPO31P04051 1460 aa11.15□□□□□ -0.62
YCR049CYCR049C CKB1P43639 278 aa11.14□□□□□ -0.63
YCR049CYCR049C UBP10P53874 792 aaPredicted RBP11.14□□□□□ -0.63
YCR049CYCR049C RPN1P38764 993 aaKnown RBP11.13□□□□□ -0.63
YCR049CYCR049C IFH1P39520 1085 aa11.13□□□□□ -0.63
YCR049CYCR049C MAK11P20484 414 aaKnown RBP11.1□□□□□ -0.63
YCR049CYCR049C MAP2P38174 421 aaKnown RBP11.09□□□□□ -0.63
YCR049CYCR049C VPS70P47161 811 aa11.09□□□□□ -0.63
YCR049CYCR049C SPB4P25808 606 aaPredicted RBP11.06□□□□□ -0.64
YCR049CYCR049C TY2B-LR1P0C2J3 1770 aa11.05□□□□□ -0.64
YCR049CYCR049C TY2B-FP0CX63 1770 aa11.05□□□□□ -0.64
YCR049CYCR049C TY2B-GR2P0CX64 1770 aa11.05□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms