RNA–Protein interactions for RNA: YCL034W

LSB5, Transcript of Protein of unknown function, yeastyeast

Gene LSB5, Length 1,065 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB5YCL034W DRS1P32892 752 aaKnown RBP17.18■□□□□ 0.34
LSB5YCL034W MON2P48563 1636 aaPredicted RBP17.09■□□□□ 0.33
LSB5YCL034W SGS1P35187 1447 aa17.04■□□□□ 0.32
LSB5YCL034W INO80P53115 1489 aa16.99■□□□□ 0.31
LSB5YCL034W TCB3Q03640 1545 aaKnown RBP16.91■□□□□ 0.3
LSB5YCL034W MTC1P47018 478 aaKnown RBP16.83■□□□□ 0.28
LSB5YCL034W TY1B-DR4Q07793 1604 aa16.74■□□□□ 0.27
LSB5YCL034W SWR1Q05471 1514 aa16.52■□□□□ 0.24
LSB5YCL034W HSL1P34244 1518 aa16.28■□□□□ 0.2
LSB5YCL034W SPT6P23615 1451 aaKnown RBP16.24■□□□□ 0.19
LSB5YCL034W DNA2P38859 1522 aa16.2■□□□□ 0.18
LSB5YCL034W KOG1P38873 1557 aa16.17■□□□□ 0.18
LSB5YCL034W SPA2P23201 1466 aaKnown RBP16.14■□□□□ 0.17
LSB5YCL034W SSN2P38931 1420 aa16.04■□□□□ 0.16
LSB5YCL034W HIR3P47171 1648 aa15.97■□□□□ 0.15
LSB5YCL034W XRN1P22147 1528 aaKnown RBP15.76■□□□□ 0.11
LSB5YCL034W THO2P53552 1597 aaKnown RBP15.66■□□□□ 0.1
LSB5YCL034W BUD4P47136 1447 aa15.6■□□□□ 0.09
LSB5YCL034W ECM5Q03214 1411 aa15.55■□□□□ 0.08
LSB5YCL034W REV3P14284 1504 aa15.53■□□□□ 0.08
LSB5YCL034W SIN3P22579 1536 aa15.46■□□□□ 0.07
LSB5YCL034W MDS3P53094 1487 aa15.35■□□□□ 0.05
LSB5YCL034W ATG2P53855 1592 aa15.35■□□□□ 0.05
LSB5YCL034W SSK2P53599 1579 aa15.33■□□□□ 0.05
LSB5YCL034W PEP1P32319 1579 aa15.3■□□□□ 0.04
LSB5YCL034W ESP1Q03018 1630 aa15.23■□□□□ 0.03
LSB5YCL034W TAF2P23255 1407 aa15.23■□□□□ 0.03
LSB5YCL034W RSE1Q04693 1361 aaKnown RBP15.22■□□□□ 0.03
LSB5YCL034W MYO2P19524 1574 aaKnown RBP15.15■□□□□ 0.02
LSB5YCL034W SKI3P17883 1432 aaKnown RBP15.14■□□□□ 0.01
LSB5YCL034W YPK9Q12697 1472 aa15.01□□□□□ -0.01
LSB5YCL034W BFR2Q06631 534 aaKnown RBP14.98□□□□□ -0.01
LSB5YCL034W BPT1P14772 1559 aa14.93□□□□□ -0.02
LSB5YCL034W SCC2Q04002 1493 aa14.89□□□□□ -0.03
LSB5YCL034W UFD4P33202 1483 aa14.84□□□□□ -0.03
LSB5YCL034W RPO31P04051 1460 aa14.82□□□□□ -0.04
LSB5YCL034W POL1P13382 1468 aa14.76□□□□□ -0.05
LSB5YCL034W TY2B-LR1P0C2J3 1770 aa14.73□□□□□ -0.05
LSB5YCL034W TY2B-FP0CX63 1770 aa14.73□□□□□ -0.05
LSB5YCL034W TY2B-GR2P0CX64 1770 aa14.73□□□□□ -0.05
LSB5YCL034W TY2B-CP25384 1770 aa14.73□□□□□ -0.05
LSB5YCL034W TY2B-DR2Q03494 1770 aa14.73□□□□□ -0.05
LSB5YCL034W TY1B-DR1Q03855 1755 aa14.73□□□□□ -0.05
LSB5YCL034W TY2B-DR3Q07791 1770 aaKnown RBP14.73□□□□□ -0.05
LSB5YCL034W TY2B-OR1Q12113 1770 aa14.73□□□□□ -0.05
LSB5YCL034W TY2B-DR1Q12472 1770 aa14.73□□□□□ -0.05
LSB5YCL034W TY2B-OR2Q12501 1770 aa14.73□□□□□ -0.05
LSB5YCL034W YCF1P39109 1515 aaKnown RBP14.7□□□□□ -0.06
LSB5YCL034W RKR1Q04781 1562 aa14.69□□□□□ -0.06
LSB5YCL034W TOP2P06786 1428 aaKnown RBP14.68□□□□□ -0.06
LSB5YCL034W STU1P38198 1513 aa14.63□□□□□ -0.07
LSB5YCL034W YOR1P53049 1477 aa14.58□□□□□ -0.08
LSB5YCL034W TY1B-DR3Q99231 1755 aa14.58□□□□□ -0.08
LSB5YCL034W TY2B-BQ12491 1770 aa14.57□□□□□ -0.08
LSB5YCL034W TY1B-BRQ12193 1756 aa14.57□□□□□ -0.08
LSB5YCL034W TY1B-GR3Q12316 1755 aa14.57□□□□□ -0.08
LSB5YCL034W TY1B-ORQ92393 1755 aa14.57□□□□□ -0.08
LSB5YCL034W CDC25P04821 1589 aa14.56□□□□□ -0.08
LSB5YCL034W SMC4Q12267 1418 aa14.55□□□□□ -0.08
LSB5YCL034W DIP2Q12220 943 aaPredicted RBP14.54□□□□□ -0.08
LSB5YCL034W CHD1P32657 1468 aa14.53□□□□□ -0.08
LSB5YCL034W TY1B-HO13535 1793 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-DR5P0C2I2 1755 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-DR6P0C2I3 1755 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-LR2P0C2I5 1755 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-LR3P0C2I6 1755 aaKnown RBP14.51□□□□□ -0.09
LSB5YCL034W TY1B-PR1P0C2I9 1755 aaKnown RBP14.51□□□□□ -0.09
LSB5YCL034W TY1B-PR2P0C2J0 1756 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-PR3P0C2J1 1755 aaKnown RBP14.51□□□□□ -0.09
LSB5YCL034W TY1B-JR1P47098 1755 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-ML2Q03434 1755 aaKnown RBP14.51□□□□□ -0.09
LSB5YCL034W TY1B-ER1Q03612 1755 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-ML1Q04711 1755 aaKnown RBP14.51□□□□□ -0.09
LSB5YCL034W TY1B-GR2Q12269 1755 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-OLQ12273 1755 aa14.51□□□□□ -0.09
LSB5YCL034W TY1B-PLQ12414 1755 aaKnown RBP14.51□□□□□ -0.09
LSB5YCL034W YTA7P40340 1379 aa14.48□□□□□ -0.09
LSB5YCL034W ESC1Q03661 1658 aaKnown RBP14.46□□□□□ -0.1
LSB5YCL034W AVT3P36062 692 aa14.45□□□□□ -0.1
LSB5YCL034W PAN1P32521 1480 aa14.44□□□□□ -0.1
LSB5YCL034W MYO4P32492 1471 aa14.42□□□□□ -0.1
LSB5YCL034W MMS22Q06164 1454 aa14.42□□□□□ -0.1
LSB5YCL034W RQC2Q12532 1038 aaKnown RBP14.41□□□□□ -0.1
LSB5YCL034W SPP41P38904 1435 aa14.34□□□□□ -0.11
LSB5YCL034W TFA1P36100 482 aa14.33□□□□□ -0.12
LSB5YCL034W RPA190P10964 1664 aaKnown RBP14.33□□□□□ -0.12
LSB5YCL034W DNF1P32660 1571 aa14.32□□□□□ -0.12
LSB5YCL034W TRM732Q03496 1420 aa14.26□□□□□ -0.13
LSB5YCL034W TY1B-JR2P47100 1755 aaKnown RBP14.25□□□□□ -0.13
LSB5YCL034W TY1B-ER2Q03619 1755 aa14.25□□□□□ -0.13
LSB5YCL034W TY1B-MR1Q04214 1755 aa14.25□□□□□ -0.13
LSB5YCL034W TY1B-MR2Q04670 1755 aaKnown RBP14.25□□□□□ -0.13
LSB5YCL034W TY1B-LR1Q12088 1755 aaKnown RBP14.25□□□□□ -0.13
LSB5YCL034W TY1B-NL1Q12112 1755 aa14.25□□□□□ -0.13
LSB5YCL034W TY1B-GR1Q12141 1755 aa14.25□□□□□ -0.13
LSB5YCL034W TY1B-BLQ12490 1755 aa14.25□□□□□ -0.13
LSB5YCL034W VTH1P40438 1549 aa14.25□□□□□ -0.13
LSB5YCL034W VTH2P40890 1549 aa14.25□□□□□ -0.13
LSB5YCL034W TSC11P40061 1430 aa14.24□□□□□ -0.13
LSB5YCL034W MET5P47169 1442 aa14.24□□□□□ -0.13
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms