RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C SGS1P35187 1447 aa8.48□□□□□ -1.05
ROT2YBR229C INO80P53115 1489 aa8.32□□□□□ -1.08
ROT2YBR229C SPA2P23201 1466 aaKnown RBP8.31□□□□□ -1.08
ROT2YBR229C SSN2P38931 1420 aa8.21□□□□□ -1.1
ROT2YBR229C TCB3Q03640 1545 aaKnown RBP8.12□□□□□ -1.11
ROT2YBR229C TY1B-DR4Q07793 1604 aa8.01□□□□□ -1.13
ROT2YBR229C DRS1P32892 752 aaKnown RBP7.91□□□□□ -1.14
ROT2YBR229C HSL1P34244 1518 aa7.88□□□□□ -1.15
ROT2YBR229C SPT6P23615 1451 aaKnown RBP7.83□□□□□ -1.16
ROT2YBR229C MON2P48563 1636 aaPredicted RBP7.79□□□□□ -1.16
ROT2YBR229C HIR3P47171 1648 aa7.75□□□□□ -1.17
ROT2YBR229C SWR1Q05471 1514 aa7.72□□□□□ -1.17
ROT2YBR229C XRN1P22147 1528 aaKnown RBP7.7□□□□□ -1.18
ROT2YBR229C REV3P14284 1504 aa7.63□□□□□ -1.19
ROT2YBR229C SIN3P22579 1536 aa7.63□□□□□ -1.19
ROT2YBR229C THO2P53552 1597 aaKnown RBP7.62□□□□□ -1.19
ROT2YBR229C SSK2P53599 1579 aa7.58□□□□□ -1.2
ROT2YBR229C SKI3P17883 1432 aaKnown RBP7.57□□□□□ -1.2
ROT2YBR229C CHD1P32657 1468 aa7.53□□□□□ -1.2
ROT2YBR229C ESP1Q03018 1630 aa7.49□□□□□ -1.21
ROT2YBR229C MYO2P19524 1574 aaKnown RBP7.49□□□□□ -1.21
ROT2YBR229C MMS22Q06164 1454 aa7.45□□□□□ -1.22
ROT2YBR229C TAF2P23255 1407 aa7.45□□□□□ -1.22
ROT2YBR229C KOG1P38873 1557 aa7.41□□□□□ -1.22
ROT2YBR229C POL1P13382 1468 aa7.41□□□□□ -1.22
ROT2YBR229C ATG2P53855 1592 aa7.4□□□□□ -1.23
ROT2YBR229C BUD4P47136 1447 aa7.39□□□□□ -1.23
ROT2YBR229C STU1P38198 1513 aa7.38□□□□□ -1.23
ROT2YBR229C DNA2P38859 1522 aa7.38□□□□□ -1.23
ROT2YBR229C YPK9Q12697 1472 aa7.38□□□□□ -1.23
ROT2YBR229C YTA7P40340 1379 aa7.34□□□□□ -1.24
ROT2YBR229C ECM5Q03214 1411 aa7.31□□□□□ -1.24
ROT2YBR229C PEP1P32319 1579 aa7.3□□□□□ -1.24
ROT2YBR229C YOR1P53049 1477 aa7.28□□□□□ -1.24
ROT2YBR229C RKR1Q04781 1562 aa7.28□□□□□ -1.24
ROT2YBR229C SCC2Q04002 1493 aa7.28□□□□□ -1.24
ROT2YBR229C BPT1P14772 1559 aa7.27□□□□□ -1.25
ROT2YBR229C MYO4P32492 1471 aa7.26□□□□□ -1.25
ROT2YBR229C RPO31P04051 1460 aa7.25□□□□□ -1.25
ROT2YBR229C MDS3P53094 1487 aa7.25□□□□□ -1.25
ROT2YBR229C SMC4Q12267 1418 aa7.22□□□□□ -1.25
ROT2YBR229C UFD4P33202 1483 aa7.21□□□□□ -1.25
ROT2YBR229C TOP2P06786 1428 aaKnown RBP7.21□□□□□ -1.26
ROT2YBR229C YCF1P39109 1515 aaKnown RBP7.19□□□□□ -1.26
ROT2YBR229C TRM732Q03496 1420 aa7.17□□□□□ -1.26
ROT2YBR229C SAS10Q12136 610 aaPredicted RBP7.16□□□□□ -1.26
ROT2YBR229C TY2B-LR1P0C2J3 1770 aa7.16□□□□□ -1.26
ROT2YBR229C TY2B-FP0CX63 1770 aa7.16□□□□□ -1.26
ROT2YBR229C TY2B-GR2P0CX64 1770 aa7.16□□□□□ -1.26
ROT2YBR229C TY2B-CP25384 1770 aa7.16□□□□□ -1.26
ROT2YBR229C TY2B-DR2Q03494 1770 aa7.16□□□□□ -1.26
ROT2YBR229C TY1B-DR1Q03855 1755 aa7.16□□□□□ -1.26
ROT2YBR229C TY2B-DR3Q07791 1770 aaKnown RBP7.16□□□□□ -1.26
ROT2YBR229C TY2B-OR1Q12113 1770 aa7.16□□□□□ -1.26
ROT2YBR229C TY2B-DR1Q12472 1770 aa7.16□□□□□ -1.26
ROT2YBR229C TY2B-OR2Q12501 1770 aa7.16□□□□□ -1.26
ROT2YBR229C TY1B-DR3Q99231 1755 aa7.15□□□□□ -1.26
ROT2YBR229C SNQ2P32568 1501 aaKnown RBP7.14□□□□□ -1.27
ROT2YBR229C IKI3Q06706 1349 aaKnown RBP7.14□□□□□ -1.27
ROT2YBR229C TAF7Q05021 590 aa7.13□□□□□ -1.27
ROT2YBR229C NUP170P38181 1502 aa7.12□□□□□ -1.27
ROT2YBR229C TY2B-BQ12491 1770 aa7.11□□□□□ -1.27
ROT2YBR229C MLP2P40457 1679 aa7.1□□□□□ -1.27
ROT2YBR229C STH1P32597 1359 aa7.09□□□□□ -1.28
ROT2YBR229C RSE1Q04693 1361 aaKnown RBP7.08□□□□□ -1.28
ROT2YBR229C PDR15Q04182 1529 aaKnown RBP7.05□□□□□ -1.28
ROT2YBR229C TY1B-HO13535 1793 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-DR5P0C2I2 1755 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-DR6P0C2I3 1755 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-LR2P0C2I5 1755 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-LR3P0C2I6 1755 aaKnown RBP7.05□□□□□ -1.28
ROT2YBR229C TY1B-PR1P0C2I9 1755 aaKnown RBP7.05□□□□□ -1.28
ROT2YBR229C TY1B-PR2P0C2J0 1756 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-PR3P0C2J1 1755 aaKnown RBP7.05□□□□□ -1.28
ROT2YBR229C TY1B-JR1P47098 1755 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-ML2Q03434 1755 aaKnown RBP7.05□□□□□ -1.28
ROT2YBR229C TY1B-ER1Q03612 1755 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-ML1Q04711 1755 aaKnown RBP7.05□□□□□ -1.28
ROT2YBR229C TY1B-GR2Q12269 1755 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-OLQ12273 1755 aa7.05□□□□□ -1.28
ROT2YBR229C TY1B-PLQ12414 1755 aaKnown RBP7.05□□□□□ -1.28
ROT2YBR229C SPP41P38904 1435 aa7.05□□□□□ -1.28
ROT2YBR229C ULS1Q08562 1619 aa7.04□□□□□ -1.28
ROT2YBR229C TY1B-BRQ12193 1756 aa7.04□□□□□ -1.28
ROT2YBR229C TY1B-GR3Q12316 1755 aa7.04□□□□□ -1.28
ROT2YBR229C TY1B-ORQ92393 1755 aa7.04□□□□□ -1.28
ROT2YBR229C GEA1P47102 1408 aaPredicted RBP7.02□□□□□ -1.29
ROT2YBR229C SSM4P40318 1319 aa7□□□□□ -1.29
ROT2YBR229C VTH1P40438 1549 aa6.99□□□□□ -1.29
ROT2YBR229C VTH2P40890 1549 aa6.99□□□□□ -1.29
ROT2YBR229C TSC11P40061 1430 aa6.98□□□□□ -1.29
ROT2YBR229C SNT2P53127 1403 aa6.97□□□□□ -1.29
ROT2YBR229C CDC25P04821 1589 aa6.96□□□□□ -1.29
ROT2YBR229C TY3B-GQ99315 1547 aa6.96□□□□□ -1.3
ROT2YBR229C IFH1P39520 1085 aa6.95□□□□□ -1.3
ROT2YBR229C PAN1P32521 1480 aa6.94□□□□□ -1.3
ROT2YBR229C TY1B-JR2P47100 1755 aaKnown RBP6.94□□□□□ -1.3
ROT2YBR229C TY1B-ER2Q03619 1755 aa6.94□□□□□ -1.3
ROT2YBR229C TY1B-MR1Q04214 1755 aa6.94□□□□□ -1.3
ROT2YBR229C TY1B-MR2Q04670 1755 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms