RNA–Protein interactions for RNA: YBR095C

RXT2, Transcript of Component of the histone deacetylase Rpd3L complex, yeast

Gene RXT2, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT2	YBR095C	MTC1	P47018	478 aa	Known RBP	17.85	■□□□□ 0.45
RXT2	YBR095C	FAP1	P53971	965 aa		17.19	■□□□□ 0.34
RXT2	YBR095C	PRY3	P47033	881 aa		16.19	■□□□□ 0.18
RXT2	YBR095C	AAD16	Q02895	342 aa		15.69	■□□□□ 0.1
RXT2	YBR095C	PRI1	P10363	409 aa		15.64	■□□□□ 0.09
RXT2	YBR095C	DRS1	P32892	752 aa	Known RBP	15.58	■□□□□ 0.08
RXT2	YBR095C	HAA1	Q12753	694 aa	Known RBP	15.24	■□□□□ 0.03
RXT2	YBR095C	YCK3	P39962	524 aa		15.21	■□□□□ 0.03
RXT2	YBR095C	ISW2	Q08773	1120 aa		15.07	■□□□□ 0
RXT2	YBR095C	RPG1	P38249	964 aa	Known RBP	14.86	□□□□□ -0.03
RXT2	YBR095C	TSR3	Q12094	313 aa	Known RBP	14.65	□□□□□ -0.06
RXT2	YBR095C	MRPL32	P25348	183 aa		14.18	□□□□□ -0.14
RXT2	YBR095C	DIP2	Q12220	943 aa	Predicted RBP	14.06	□□□□□ -0.16
RXT2	YBR095C	YGL015C	P33199	130 aa		13.92	□□□□□ -0.18
RXT2	YBR095C	RSE1	Q04693	1361 aa	Known RBP	13.92	□□□□□ -0.18
RXT2	YBR095C	REB1	P21538	810 aa		13.56	□□□□□ -0.24
RXT2	YBR095C	RPL17A	P05740	184 aa	Known RBP	13.49	□□□□□ -0.25
RXT2	YBR095C	RPL17B	P46990	184 aa	Known RBP	13.49	□□□□□ -0.25
RXT2	YBR095C	AVT3	P36062	692 aa		13.26	□□□□□ -0.29
RXT2	YBR095C	BUD31	P25337	157 aa	Predicted RBP	13.2	□□□□□ -0.3
RXT2	YBR095C	CDC27	P38042	758 aa		13.19	□□□□□ -0.3
RXT2	YBR095C	UBP10	P53874	792 aa	Predicted RBP	13.09	□□□□□ -0.31
RXT2	YBR095C	YKR023W	P36119	530 aa	Known RBP	12.94	□□□□□ -0.34
RXT2	YBR095C	MAP2	P38174	421 aa	Known RBP	12.93	□□□□□ -0.34
RXT2	YBR095C	SPT21	P35209	758 aa		12.86	□□□□□ -0.35
RXT2	YBR095C	TFC8	Q12308	588 aa		12.7	□□□□□ -0.38
RXT2	YBR095C	HO	P09932	586 aa		12.63	□□□□□ -0.39
RXT2	YBR095C	TIF4632	P39936	914 aa	Known RBP	12.58	□□□□□ -0.4
RXT2	YBR095C	DCD1	P06773	312 aa		12.56	□□□□□ -0.4
RXT2	YBR095C	TGL3	P40308	642 aa		12.53	□□□□□ -0.4
RXT2	YBR095C	UBP9	P39967	754 aa		12.49	□□□□□ -0.41
RXT2	YBR095C	SCY1	P53009	804 aa		12.48	□□□□□ -0.41
RXT2	YBR095C	SIS1	P25294	352 aa	Known RBP	12.45	□□□□□ -0.42
RXT2	YBR095C	BFR2	Q06631	534 aa	Known RBP	12.45	□□□□□ -0.42
RXT2	YBR095C	SLX5	P32828	619 aa	Known RBP	12.44	□□□□□ -0.42
RXT2	YBR095C	BCH2	P36122	765 aa		12.22	□□□□□ -0.45
RXT2	YBR095C	RIM101	P33400	625 aa		12.21	□□□□□ -0.45
RXT2	YBR095C	MST1	P07236	462 aa		11.89	□□□□□ -0.51
RXT2	YBR095C	EPS1	P40557	701 aa		11.84	□□□□□ -0.51
RXT2	YBR095C	BDF1	P35817	686 aa		11.83	□□□□□ -0.52
RXT2	YBR095C	YOR238W	Q08634	303 aa		11.77	□□□□□ -0.53
RXT2	YBR095C	YBL029C-A	Q3E756	94 aa		11.76	□□□□□ -0.53
RXT2	YBR095C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.71	□□□□□ -0.53	not detected
RXT2	YBR095C	OXP1	P28273	1286 aa		11.7	□□□□□ -0.54
RXT2	YBR095C	VNX1	P42839	908 aa		11.64	□□□□□ -0.55
RXT2	YBR095C	PTP3	P40048	928 aa		11.6	□□□□□ -0.55
RXT2	YBR095C	YIL055C	P40523	627 aa	Known RBP	11.59	□□□□□ -0.55
RXT2	YBR095C	YAP5	P40574	245 aa		11.55	□□□□□ -0.56
RXT2	YBR095C	SPP1	Q03012	353 aa		11.54	□□□□□ -0.56
RXT2	YBR095C	BBC1	P47068	1157 aa		11.52	□□□□□ -0.57
RXT2	YBR095C	RSM7	P47150	247 aa		11.42	□□□□□ -0.58
RXT2	YBR095C	WSC3	Q12215	556 aa		11.41	□□□□□ -0.58
RXT2	YBR095C	AIR2	Q12476	344 aa	Known RBP	11.4	□□□□□ -0.58
RXT2	YBR095C	AI2	P03876	854 aa		11.38	□□□□□ -0.59
RXT2	YBR095C	TIF11	P38912	153 aa	Known RBP	11.38	□□□□□ -0.59
RXT2	YBR095C	YJL171C	P46992	396 aa		11.38	□□□□□ -0.59
RXT2	YBR095C	FKH1	P40466	484 aa		11.35	□□□□□ -0.59
RXT2	YBR095C	GTT3	P39996	337 aa		11.3	□□□□□ -0.6
RXT2	YBR095C	LDB19	Q12502	818 aa		11.19	□□□□□ -0.62
RXT2	YBR095C	YAH1	Q12184	172 aa	Known RBP	11.18	□□□□□ -0.62
RXT2	YBR095C	ULI1	P43604	169 aa		11.15	□□□□□ -0.62
RXT2	YBR095C	BMT6	Q12291	365 aa		11.15	□□□□□ -0.62
RXT2	YBR095C	IOC2	Q12072	812 aa		11.14	□□□□□ -0.63
RXT2	YBR095C	MSB4	Q12317	492 aa		11.07	□□□□□ -0.64
RXT2	YBR095C	EAP1	P36041	632 aa	Known RBP	11.04	□□□□□ -0.64
RXT2	YBR095C	PSD2	P53037	1138 aa	Known RBP	10.99	□□□□□ -0.65
RXT2	YBR095C	YLR271W	Q06152	274 aa		10.99	□□□□□ -0.65
RXT2	YBR095C	PIB1	Q06651	286 aa		10.98	□□□□□ -0.65
RXT2	YBR095C	MRM1	P25270	412 aa		10.9	□□□□□ -0.66
RXT2	YBR095C	RTG1	P32607	177 aa		10.89	□□□□□ -0.67
RXT2	YBR095C	NCR1	Q12200	1170 aa		10.87	□□□□□ -0.67
RXT2	YBR095C	TFA1	P36100	482 aa		10.86	□□□□□ -0.67
RXT2	YBR095C	YOL036W	Q08206	761 aa		10.86	□□□□□ -0.67
RXT2	YBR095C	TRP5	P00931	707 aa	Known RBP	10.85	□□□□□ -0.67
RXT2	YBR095C	SEC61	P32915	480 aa		10.84	□□□□□ -0.67
RXT2	YBR095C	SET4	P42948	560 aa		10.82	□□□□□ -0.68
RXT2	YBR095C	YNL035C	P53962	389 aa	Known RBP	10.82	□□□□□ -0.68
RXT2	YBR095C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	10.79	□□□□□ -0.68	not detected
RXT2	YBR095C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.73	□□□□□ -0.69	not detected
RXT2	YBR095C	DBP1	P24784	617 aa	Known RBP	10.72	□□□□□ -0.69
RXT2	YBR095C	TFG1	P41895	735 aa	Predicted RBP	10.71	□□□□□ -0.69
RXT2	YBR095C	SAM3	Q08986	587 aa		10.71	□□□□□ -0.69
RXT2	YBR095C	VMA1	P17255	1071 aa	Known RBP	10.69	□□□□□ -0.7
RXT2	YBR095C	VPS29	P38759	282 aa		10.69	□□□□□ -0.7
RXT2	YBR095C	RTG3	P38165	486 aa		10.66	□□□□□ -0.7
RXT2	YBR095C	SSP1	P38871	571 aa		10.62	□□□□□ -0.71
RXT2	YBR095C	YFR006W	P43590	535 aa		10.62	□□□□□ -0.71
RXT2	YBR095C	JIP4	Q03361	876 aa		10.62	□□□□□ -0.71
RXT2	YBR095C	ABP1	P15891	592 aa	Known RBP	10.61	□□□□□ -0.71
RXT2	YBR095C	BCK2	P33306	851 aa		10.61	□□□□□ -0.71
RXT2	YBR095C	STS1	P38637	319 aa		10.59	□□□□□ -0.71
RXT2	YBR095C	DAN4	P47179	1161 aa		10.59	□□□□□ -0.71
RXT2	YBR095C	SAP30	P38429	201 aa		10.57	□□□□□ -0.72
RXT2	YBR095C	CHL1	P22516	861 aa	Predicted RBP	10.56	□□□□□ -0.72
RXT2	YBR095C	YDL129W	Q07555	291 aa		10.55	□□□□□ -0.72
RXT2	YBR095C	MGA2	P40578	1113 aa		10.52	□□□□□ -0.73
RXT2	YBR095C	CST9	Q06032	482 aa		10.52	□□□□□ -0.73
RXT2	YBR095C	GYP5	Q12344	894 aa		10.49	□□□□□ -0.73
RXT2	YBR095C	PRE3	P38624	215 aa		10.48	□□□□□ -0.73
RXT2	YBR095C	HTA1	P04911	132 aa	Known RBP	10.47	□□□□□ -0.73

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms