RNA–Protein interactions for RNA: YAL015C

NTG1, Transcript of DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase, yeast

Gene NTG1, Length 1,200 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTG1	YAL015C	MTC1	P47018	478 aa	Known RBP	12.61	□□□□□ -0.39
NTG1	YAL015C	DRS1	P32892	752 aa	Known RBP	12.03	□□□□□ -0.48
NTG1	YAL015C	SGS1	P35187	1447 aa		11.04	□□□□□ -0.64
NTG1	YAL015C	FAP1	P53971	965 aa		10.95	□□□□□ -0.66
NTG1	YAL015C	SPA2	P23201	1466 aa	Known RBP	10.9	□□□□□ -0.66
NTG1	YAL015C	SSN2	P38931	1420 aa		10.77	□□□□□ -0.68
NTG1	YAL015C	INO80	P53115	1489 aa		10.64	□□□□□ -0.71
NTG1	YAL015C	PRI1	P10363	409 aa		10.48	□□□□□ -0.73
NTG1	YAL015C	DIP2	Q12220	943 aa	Predicted RBP	10.46	□□□□□ -0.73
NTG1	YAL015C	AAD16	Q02895	342 aa		10.36	□□□□□ -0.75
NTG1	YAL015C	ISW2	Q08773	1120 aa		10.32	□□□□□ -0.76
NTG1	YAL015C	PRY3	P47033	881 aa		10.31	□□□□□ -0.76
NTG1	YAL015C	TCB3	Q03640	1545 aa	Known RBP	10.29	□□□□□ -0.76
NTG1	YAL015C	RPG1	P38249	964 aa	Known RBP	10.26	□□□□□ -0.77
NTG1	YAL015C	AVT3	P36062	692 aa		10.21	□□□□□ -0.77
NTG1	YAL015C	SKI3	P17883	1432 aa	Known RBP	10.21	□□□□□ -0.78
NTG1	YAL015C	BFR2	Q06631	534 aa	Known RBP	10.12	□□□□□ -0.79
NTG1	YAL015C	TY1B-DR4	Q07793	1604 aa		10.07	□□□□□ -0.8
NTG1	YAL015C	HSL1	P34244	1518 aa		10.02	□□□□□ -0.8
NTG1	YAL015C	RSE1	Q04693	1361 aa	Known RBP	10.01	□□□□□ -0.81
NTG1	YAL015C	SPT6	P23615	1451 aa	Known RBP	9.99	□□□□□ -0.81
NTG1	YAL015C	TSR3	Q12094	313 aa	Known RBP	9.93	□□□□□ -0.82
NTG1	YAL015C	CHD1	P32657	1468 aa		9.92	□□□□□ -0.82
NTG1	YAL015C	YCK3	P39962	524 aa		9.91	□□□□□ -0.82
NTG1	YAL015C	XRN1	P22147	1528 aa	Known RBP	9.9	□□□□□ -0.82
NTG1	YAL015C	MMS22	Q06164	1454 aa		9.9	□□□□□ -0.83
NTG1	YAL015C	HIR3	P47171	1648 aa		9.88	□□□□□ -0.83
NTG1	YAL015C	REV3	P14284	1504 aa		9.79	□□□□□ -0.84
NTG1	YAL015C	THO2	P53552	1597 aa	Known RBP	9.75	□□□□□ -0.85
NTG1	YAL015C	SIN3	P22579	1536 aa		9.74	□□□□□ -0.85
NTG1	YAL015C	SSK2	P53599	1579 aa		9.7	□□□□□ -0.86
NTG1	YAL015C	RPL17A	P05740	184 aa	Known RBP	9.69	□□□□□ -0.86
NTG1	YAL015C	TAF2	P23255	1407 aa		9.69	□□□□□ -0.86
NTG1	YAL015C	NOP2	P40991	618 aa	Known RBP	9.69	□□□□□ -0.86
NTG1	YAL015C	RPL17B	P46990	184 aa	Known RBP	9.69	□□□□□ -0.86
NTG1	YAL015C	HAA1	Q12753	694 aa	Known RBP	9.68	□□□□□ -0.86
NTG1	YAL015C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	9.67	□□□□□ -0.86	not detected
NTG1	YAL015C	SWR1	Q05471	1514 aa		9.65	□□□□□ -0.86
NTG1	YAL015C	UFD4	P33202	1483 aa		9.64	□□□□□ -0.87
NTG1	YAL015C	YTA7	P40340	1379 aa		9.63	□□□□□ -0.87
NTG1	YAL015C	STU1	P38198	1513 aa		9.62	□□□□□ -0.87
NTG1	YAL015C	POL1	P13382	1468 aa		9.6	□□□□□ -0.87
NTG1	YAL015C	SAS10	Q12136	610 aa	Predicted RBP	9.6	□□□□□ -0.87
NTG1	YAL015C	MYO2	P19524	1574 aa	Known RBP	9.59	□□□□□ -0.87
NTG1	YAL015C	TRM732	Q03496	1420 aa		9.57	□□□□□ -0.88
NTG1	YAL015C	MON2	P48563	1636 aa	Predicted RBP	9.57	□□□□□ -0.88
NTG1	YAL015C	ESP1	Q03018	1630 aa		9.57	□□□□□ -0.88
NTG1	YAL015C	REB1	P21538	810 aa		9.57	□□□□□ -0.88
NTG1	YAL015C	IKI3	Q06706	1349 aa	Known RBP	9.56	□□□□□ -0.88
NTG1	YAL015C	BPT1	P14772	1559 aa		9.5	□□□□□ -0.89
NTG1	YAL015C	SPP41	P38904	1435 aa		9.48	□□□□□ -0.89
NTG1	YAL015C	MRPL32	P25348	183 aa		9.47	□□□□□ -0.89
NTG1	YAL015C	ECM5	Q03214	1411 aa		9.47	□□□□□ -0.89
NTG1	YAL015C	SCC2	Q04002	1493 aa		9.46	□□□□□ -0.9
NTG1	YAL015C	YPK9	Q12697	1472 aa		9.46	□□□□□ -0.9
NTG1	YAL015C	BUD4	P47136	1447 aa		9.45	□□□□□ -0.9
NTG1	YAL015C	DNA2	P38859	1522 aa		9.43	□□□□□ -0.9
NTG1	YAL015C	TAF7	Q05021	590 aa		9.43	□□□□□ -0.9
NTG1	YAL015C	MYO4	P32492	1471 aa		9.42	□□□□□ -0.9
NTG1	YAL015C	YOR1	P53049	1477 aa		9.41	□□□□□ -0.9
NTG1	YAL015C	SSM4	P40318	1319 aa		9.39	□□□□□ -0.91
NTG1	YAL015C	RKR1	Q04781	1562 aa		9.37	□□□□□ -0.91
NTG1	YAL015C	NUP170	P38181	1502 aa		9.37	□□□□□ -0.91
NTG1	YAL015C	SPT21	P35209	758 aa		9.36	□□□□□ -0.91
NTG1	YAL015C	ENP1	P38333	483 aa	Known RBP	9.36	□□□□□ -0.91
NTG1	YAL015C	ATG2	P53855	1592 aa		9.36	□□□□□ -0.91
NTG1	YAL015C	STH1	P32597	1359 aa		9.34	□□□□□ -0.91
NTG1	YAL015C	POL5	P39985	1022 aa	Known RBP	9.33	□□□□□ -0.92
NTG1	YAL015C	SMC4	Q12267	1418 aa		9.32	□□□□□ -0.92
NTG1	YAL015C	SNQ2	P32568	1501 aa	Known RBP	9.32	□□□□□ -0.92
NTG1	YAL015C	RPO31	P04051	1460 aa		9.29	□□□□□ -0.92
NTG1	YAL015C	TOP2	P06786	1428 aa	Known RBP	9.29	□□□□□ -0.92
NTG1	YAL015C	IFH1	P39520	1085 aa		9.25	□□□□□ -0.93
NTG1	YAL015C	PAN1	P32521	1480 aa		9.24	□□□□□ -0.93
NTG1	YAL015C	GEA1	P47102	1408 aa	Predicted RBP	9.23	□□□□□ -0.93
NTG1	YAL015C	RTT106	P40161	455 aa		9.22	□□□□□ -0.93
NTG1	YAL015C	TSC11	P40061	1430 aa		9.22	□□□□□ -0.93
NTG1	YAL015C	SEC3	P33332	1336 aa	Known RBP	9.21	□□□□□ -0.94
NTG1	YAL015C	PEP1	P32319	1579 aa		9.2	□□□□□ -0.94
NTG1	YAL015C	YKR023W	P36119	530 aa	Known RBP	9.2	□□□□□ -0.94
NTG1	YAL015C	YCF1	P39109	1515 aa	Known RBP	9.2	□□□□□ -0.94
NTG1	YAL015C	SPT7	P35177	1332 aa		9.19	□□□□□ -0.94
NTG1	YAL015C	PDR15	Q04182	1529 aa	Known RBP	9.18	□□□□□ -0.94
NTG1	YAL015C	KOG1	P38873	1557 aa		9.16	□□□□□ -0.94
NTG1	YAL015C	TFA1	P36100	482 aa		9.16	□□□□□ -0.94
NTG1	YAL015C	CDC27	P38042	758 aa		9.15	□□□□□ -0.94
NTG1	YAL015C	MLP2	P40457	1679 aa		9.15	□□□□□ -0.94
NTG1	YAL015C	MDS3	P53094	1487 aa		9.13	□□□□□ -0.95
NTG1	YAL015C	ULS1	Q08562	1619 aa		9.09	□□□□□ -0.95
NTG1	YAL015C	RIM101	P33400	625 aa		9.08	□□□□□ -0.96
NTG1	YAL015C	TY1B-DR3	Q99231	1755 aa		9.08	□□□□□ -0.96
NTG1	YAL015C	PRS1	P32895	427 aa	Known RBP	9.07	□□□□□ -0.96
NTG1	YAL015C	VPS15	P22219	1454 aa		9.07	□□□□□ -0.96
NTG1	YAL015C	TY3B-G	Q99315	1547 aa		9.06	□□□□□ -0.96
NTG1	YAL015C	TY2B-LR1	P0C2J3	1770 aa		9.06	□□□□□ -0.96
NTG1	YAL015C	TY2B-F	P0CX63	1770 aa		9.06	□□□□□ -0.96
NTG1	YAL015C	TY2B-GR2	P0CX64	1770 aa		9.06	□□□□□ -0.96
NTG1	YAL015C	TY2B-C	P25384	1770 aa		9.06	□□□□□ -0.96
NTG1	YAL015C	TY2B-DR2	Q03494	1770 aa		9.06	□□□□□ -0.96
NTG1	YAL015C	TY1B-DR1	Q03855	1755 aa		9.06	□□□□□ -0.96

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms