RNA–Protein interactions for RNA: RDN5-3

RDN5-3, Transcript of Variant 5S ribosomal RNA (5S rRNA) gene, yeastyeast

Gene RDN5-3, Length 119 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN5-3RDN5-3 SGS1P35187 1447 aa11.58□□□□□ -0.56
RDN5-3RDN5-3 INO80P53115 1489 aa11.38□□□□□ -0.59
RDN5-3RDN5-3 SPA2P23201 1466 aaKnown RBP11.35□□□□□ -0.59
RDN5-3RDN5-3 SSN2P38931 1420 aa11.18□□□□□ -0.62
RDN5-3RDN5-3 TCB3Q03640 1545 aaKnown RBP11.1□□□□□ -0.63
RDN5-3RDN5-3 TY1B-DR4Q07793 1604 aa10.91□□□□□ -0.66
RDN5-3RDN5-3 DRS1P32892 752 aaKnown RBP10.83□□□□□ -0.68
RDN5-3RDN5-3 HSL1P34244 1518 aa10.74□□□□□ -0.69
RDN5-3RDN5-3 SPT6P23615 1451 aaKnown RBP10.7□□□□□ -0.7
RDN5-3RDN5-3 MON2P48563 1636 aaPredicted RBP10.64□□□□□ -0.71
RDN5-3RDN5-3 HIR3P47171 1648 aa10.57□□□□□ -0.72
RDN5-3RDN5-3 SWR1Q05471 1514 aa10.53□□□□□ -0.72
RDN5-3RDN5-3 XRN1P22147 1528 aaKnown RBP10.51□□□□□ -0.73
RDN5-3RDN5-3 REV3P14284 1504 aa10.42□□□□□ -0.74
RDN5-3RDN5-3 SIN3P22579 1536 aa10.42□□□□□ -0.74
RDN5-3RDN5-3 THO2P53552 1597 aaKnown RBP10.4□□□□□ -0.74
RDN5-3RDN5-3 SKI3P17883 1432 aaKnown RBP10.34□□□□□ -0.75
RDN5-3RDN5-3 SSK2P53599 1579 aa10.33□□□□□ -0.76
RDN5-3RDN5-3 CHD1P32657 1468 aa10.28□□□□□ -0.76
RDN5-3RDN5-3 MYO2P19524 1574 aaKnown RBP10.25□□□□□ -0.77
RDN5-3RDN5-3 ESP1Q03018 1630 aa10.22□□□□□ -0.77
RDN5-3RDN5-3 TAF2P23255 1407 aa10.2□□□□□ -0.78
RDN5-3RDN5-3 MMS22Q06164 1454 aa10.17□□□□□ -0.78
RDN5-3RDN5-3 KOG1P38873 1557 aa10.14□□□□□ -0.79
RDN5-3RDN5-3 POL1P13382 1468 aa10.11□□□□□ -0.79
RDN5-3RDN5-3 BUD4P47136 1447 aa10.11□□□□□ -0.79
RDN5-3RDN5-3 ATG2P53855 1592 aa10.09□□□□□ -0.79
RDN5-3RDN5-3 YPK9Q12697 1472 aa10.08□□□□□ -0.8
RDN5-3RDN5-3 DNA2P38859 1522 aa10.07□□□□□ -0.8
RDN5-3RDN5-3 STU1P38198 1513 aa10.07□□□□□ -0.8
RDN5-3RDN5-3 YTA7P40340 1379 aa10.05□□□□□ -0.8
RDN5-3RDN5-3 ECM5Q03214 1411 aa10□□□□□ -0.81
RDN5-3RDN5-3 PEP1P32319 1579 aa9.96□□□□□ -0.82
RDN5-3RDN5-3 MYO4P32492 1471 aa9.94□□□□□ -0.82
RDN5-3RDN5-3 RKR1Q04781 1562 aa9.93□□□□□ -0.82
RDN5-3RDN5-3 YOR1P53049 1477 aa9.93□□□□□ -0.82
RDN5-3RDN5-3 SCC2Q04002 1493 aa9.93□□□□□ -0.82
RDN5-3RDN5-3 RPO31P04051 1460 aa9.91□□□□□ -0.82
RDN5-3RDN5-3 MDS3P53094 1487 aa9.91□□□□□ -0.82
RDN5-3RDN5-3 BPT1P14772 1559 aa9.9□□□□□ -0.82
RDN5-3RDN5-3 SMC4Q12267 1418 aa9.87□□□□□ -0.83
RDN5-3RDN5-3 TOP2P06786 1428 aaKnown RBP9.86□□□□□ -0.83
RDN5-3RDN5-3 UFD4P33202 1483 aa9.83□□□□□ -0.84
RDN5-3RDN5-3 TAF7Q05021 590 aa9.81□□□□□ -0.84
RDN5-3RDN5-3 YCF1P39109 1515 aaKnown RBP9.81□□□□□ -0.84
RDN5-3RDN5-3 SAS10Q12136 610 aaPredicted RBP9.8□□□□□ -0.84
RDN5-3RDN5-3 TRM732Q03496 1420 aa9.78□□□□□ -0.84
RDN5-3RDN5-3 TY2B-LR1P0C2J3 1770 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 TY2B-FP0CX63 1770 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 TY2B-GR2P0CX64 1770 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 TY2B-CP25384 1770 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 TY2B-DR2Q03494 1770 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 TY1B-DR1Q03855 1755 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 TY2B-DR3Q07791 1770 aaKnown RBP9.76□□□□□ -0.85
RDN5-3RDN5-3 TY2B-OR1Q12113 1770 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 TY2B-DR1Q12472 1770 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 TY2B-OR2Q12501 1770 aa9.76□□□□□ -0.85
RDN5-3RDN5-3 IKI3Q06706 1349 aaKnown RBP9.76□□□□□ -0.85
RDN5-3RDN5-3 SNQ2P32568 1501 aaKnown RBP9.75□□□□□ -0.85
RDN5-3RDN5-3 TY1B-DR3Q99231 1755 aa9.75□□□□□ -0.85
RDN5-3RDN5-3 STH1P32597 1359 aa9.7□□□□□ -0.86
RDN5-3RDN5-3 NUP170P38181 1502 aa9.7□□□□□ -0.86
RDN5-3RDN5-3 MLP2P40457 1679 aa9.69□□□□□ -0.86
RDN5-3RDN5-3 TY2B-BQ12491 1770 aa9.69□□□□□ -0.86
RDN5-3RDN5-3 SPP41P38904 1435 aa9.64□□□□□ -0.87
RDN5-3RDN5-3 PDR15Q04182 1529 aaKnown RBP9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-HO13535 1793 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-DR5P0C2I2 1755 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-DR6P0C2I3 1755 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-LR2P0C2I5 1755 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-LR3P0C2I6 1755 aaKnown RBP9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-PR1P0C2I9 1755 aaKnown RBP9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-PR2P0C2J0 1756 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-PR3P0C2J1 1755 aaKnown RBP9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-JR1P47098 1755 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-ML2Q03434 1755 aaKnown RBP9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-ER1Q03612 1755 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-ML1Q04711 1755 aaKnown RBP9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-GR2Q12269 1755 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-OLQ12273 1755 aa9.62□□□□□ -0.87
RDN5-3RDN5-3 TY1B-PLQ12414 1755 aaKnown RBP9.62□□□□□ -0.87
RDN5-3RDN5-3 RSE1Q04693 1361 aaKnown RBP9.61□□□□□ -0.87
RDN5-3RDN5-3 GEA1P47102 1408 aaPredicted RBP9.59□□□□□ -0.87
RDN5-3RDN5-3 TY1B-BRQ12193 1756 aa9.59□□□□□ -0.87
RDN5-3RDN5-3 TY1B-GR3Q12316 1755 aa9.59□□□□□ -0.87
RDN5-3RDN5-3 TY1B-ORQ92393 1755 aa9.59□□□□□ -0.87
RDN5-3RDN5-3 ULS1Q08562 1619 aa9.58□□□□□ -0.88
RDN5-3RDN5-3 VTH1P40438 1549 aa9.55□□□□□ -0.88
RDN5-3RDN5-3 VTH2P40890 1549 aa9.55□□□□□ -0.88
RDN5-3RDN5-3 TSC11P40061 1430 aa9.55□□□□□ -0.88
RDN5-3RDN5-3 SSM4P40318 1319 aa9.54□□□□□ -0.88
RDN5-3RDN5-3 CDC25P04821 1589 aa9.51□□□□□ -0.89
RDN5-3RDN5-3 PAN1P32521 1480 aa9.51□□□□□ -0.89
RDN5-3RDN5-3 SNT2P53127 1403 aa9.5□□□□□ -0.89
RDN5-3RDN5-3 IFH1P39520 1085 aa9.49□□□□□ -0.89
RDN5-3RDN5-3 TY1B-JR2P47100 1755 aaKnown RBP9.47□□□□□ -0.89
RDN5-3RDN5-3 TY1B-ER2Q03619 1755 aa9.47□□□□□ -0.89
RDN5-3RDN5-3 TY1B-MR1Q04214 1755 aa9.47□□□□□ -0.89
RDN5-3RDN5-3 TY1B-MR2Q04670 1755 aaKnown RBP9.47□□□□□ -0.89
RDN5-3RDN5-3 TY1B-LR1Q12088 1755 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms