RNA–Protein interactions for RNA: Q0160

SCEI, Transcript of I-SceI DNA endonuclease, yeastyeast

Gene SCEI, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCEIQ0160 FAP1P53971 965 aa18.39■□□□□ 0.53
SCEIQ0160 MTC1P47018 478 aaKnown RBP18.3■□□□□ 0.52
SCEIQ0160 PRY3P47033 881 aa17.35■□□□□ 0.37
SCEIQ0160 AAD16Q02895 342 aa16.5■□□□□ 0.23
SCEIQ0160 PRI1P10363 409 aa16.38■□□□□ 0.21
SCEIQ0160 DRS1P32892 752 aaKnown RBP16.37■□□□□ 0.21
SCEIQ0160 YCK3P39962 524 aa16.34■□□□□ 0.21
SCEIQ0160 HAA1Q12753 694 aaKnown RBP16.17■□□□□ 0.18
SCEIQ0160 ISW2Q08773 1120 aa15.54■□□□□ 0.08
SCEIQ0160 RPG1P38249 964 aaKnown RBP15.43■□□□□ 0.06
SCEIQ0160 TSR3Q12094 313 aaKnown RBP15.4■□□□□ 0.06
SCEIQ0160 MRPL32P25348 183 aa14.79□□□□□ -0.04
SCEIQ0160 YGL015CP33199 130 aa14.66□□□□□ -0.06
SCEIQ0160 DIP2Q12220 943 aaPredicted RBP14.59□□□□□ -0.07
SCEIQ0160 RSE1Q04693 1361 aaKnown RBP14.29□□□□□ -0.12
SCEIQ0160 BUD31P25337 157 aaPredicted RBP14.19□□□□□ -0.14
SCEIQ0160 AVT3P36062 692 aa13.91□□□□□ -0.18
SCEIQ0160 REB1P21538 810 aa13.88□□□□□ -0.19
SCEIQ0160 RPL17AP05740 184 aaKnown RBP13.85□□□□□ -0.19
SCEIQ0160 RPL17BP46990 184 aaKnown RBP13.85□□□□□ -0.19
SCEIQ0160 CDC27P38042 758 aa13.76□□□□□ -0.21
SCEIQ0160 UBP10P53874 792 aaPredicted RBP13.59□□□□□ -0.23
SCEIQ0160 MAP2P38174 421 aaKnown RBP13.53□□□□□ -0.24
SCEIQ0160 SIS1P25294 352 aaKnown RBP13.35□□□□□ -0.27
SCEIQ0160 YKR023WP36119 530 aaKnown RBP13.32□□□□□ -0.28
SCEIQ0160 BFR2Q06631 534 aaKnown RBP13.32□□□□□ -0.28
SCEIQ0160 SPT21P35209 758 aa13.24□□□□□ -0.29
SCEIQ0160 UBP9P39967 754 aa13.13□□□□□ -0.31
SCEIQ0160 DCD1P06773 312 aa13.05□□□□□ -0.32
SCEIQ0160 HOP09932 586 aa13.05□□□□□ -0.32
SCEIQ0160 TIF4632P39936 914 aaKnown RBP13.04□□□□□ -0.32
SCEIQ0160 TFC8Q12308 588 aa13.04□□□□□ -0.32
SCEIQ0160 TGL3P40308 642 aa13□□□□□ -0.33
SCEIQ0160 SCY1P53009 804 aa12.95□□□□□ -0.34
SCEIQ0160 SLX5P32828 619 aaKnown RBP12.88□□□□□ -0.35
SCEIQ0160 RIM101P33400 625 aa12.64□□□□□ -0.39
SCEIQ0160 BCH2P36122 765 aa12.55□□□□□ -0.4
SCEIQ0160 YBL029C-AQ3E756 94 aa12.35□□□□□ -0.43
SCEIQ0160 MST1P07236 462 aa12.27□□□□□ -0.45
SCEIQ0160 OXP1P28273 1286 aa12.18□□□□□ -0.46
SCEIQ0160 EPS1P40557 701 aa12.15□□□□□ -0.46
SCEIQ0160 YOR238WQ08634 303 aa12.14□□□□□ -0.47
SCEIQ0160 VNX1P42839 908 aa12.13□□□□□ -0.47
SCEIQ0160 BDF1P35817 686 aa12.12□□□□□ -0.47
SCEIQ0160 SPP1Q03012 353 aa12.02□□□□□ -0.49
SCEIQ0160 PTP3P40048 928 aa12.01□□□□□ -0.49
SCEIQ0160 YIL055CP40523 627 aaKnown RBP12□□□□□ -0.49
SCEIQ0160 AIR2Q12476 344 aaKnown RBP11.96□□□□□ -0.49
SCEIQ0160 NSR1P27476 414 aaKnown RBP RIP-Chip data11.93□□□□□ -0.5not detected
SCEIQ0160 YJL171CP46992 396 aa11.93□□□□□ -0.5
SCEIQ0160 WSC3Q12215 556 aa11.9□□□□□ -0.5
SCEIQ0160 FKH1P40466 484 aa11.87□□□□□ -0.51
SCEIQ0160 BBC1P47068 1157 aa11.84□□□□□ -0.51
SCEIQ0160 RSM7P47150 247 aa11.84□□□□□ -0.51
SCEIQ0160 YAP5P40574 245 aa11.82□□□□□ -0.52
SCEIQ0160 AI2P03876 854 aa11.78□□□□□ -0.52
SCEIQ0160 TIF11P38912 153 aaKnown RBP11.78□□□□□ -0.52
SCEIQ0160 YAH1Q12184 172 aaKnown RBP11.7□□□□□ -0.54
SCEIQ0160 BMT6Q12291 365 aa11.63□□□□□ -0.55
SCEIQ0160 LDB19Q12502 818 aa11.63□□□□□ -0.55
SCEIQ0160 GTT3P39996 337 aa11.61□□□□□ -0.55
SCEIQ0160 TFA1P36100 482 aa11.55□□□□□ -0.56
SCEIQ0160 ULI1P43604 169 aa11.53□□□□□ -0.56
SCEIQ0160 IOC2Q12072 812 aa11.53□□□□□ -0.56
SCEIQ0160 YLR271WQ06152 274 aa11.52□□□□□ -0.57
SCEIQ0160 PSD2P53037 1138 aaKnown RBP11.45□□□□□ -0.58
SCEIQ0160 PIB1Q06651 286 aa11.32□□□□□ -0.6
SCEIQ0160 MRM1P25270 412 aa11.31□□□□□ -0.6
SCEIQ0160 MSB4Q12317 492 aa11.27□□□□□ -0.61
SCEIQ0160 RTG1P32607 177 aa11.26□□□□□ -0.61
SCEIQ0160 EAP1P36041 632 aaKnown RBP11.25□□□□□ -0.61
SCEIQ0160 ARP8Q12386 881 aaKnown RBP RIP-Chip data11.23□□□□□ -0.61not detected
SCEIQ0160 SSP1P38871 571 aa11.22□□□□□ -0.61
SCEIQ0160 NCR1Q12200 1170 aa11.22□□□□□ -0.61
SCEIQ0160 TRP5P00931 707 aaKnown RBP11.15□□□□□ -0.62
SCEIQ0160 SET4P42948 560 aa11.12□□□□□ -0.63
SCEIQ0160 YMR1P47147 688 aaKnown RBP RIP-Chip data11.12□□□□□ -0.63not detected
SCEIQ0160 YOL036WQ08206 761 aa11.12□□□□□ -0.63
SCEIQ0160 SEC61P32915 480 aa11.09□□□□□ -0.63
SCEIQ0160 VPS29P38759 282 aa11.09□□□□□ -0.63
SCEIQ0160 YNL035CP53962 389 aaKnown RBP11.09□□□□□ -0.63
SCEIQ0160 DBP1P24784 617 aaKnown RBP11.07□□□□□ -0.64
SCEIQ0160 CST9Q06032 482 aa11.07□□□□□ -0.64
SCEIQ0160 RTG3P38165 486 aa11.05□□□□□ -0.64
SCEIQ0160 MGA2P40578 1113 aa11.04□□□□□ -0.64
SCEIQ0160 BCK2P33306 851 aa11.03□□□□□ -0.64
SCEIQ0160 VMA1P17255 1071 aaKnown RBP11□□□□□ -0.65
SCEIQ0160 YFR006WP43590 535 aa11□□□□□ -0.65
SCEIQ0160 STS1P38637 319 aa10.99□□□□□ -0.65
SCEIQ0160 SAM3Q08986 587 aa10.98□□□□□ -0.65
SCEIQ0160 TFG1P41895 735 aaPredicted RBP10.95□□□□□ -0.66
SCEIQ0160 SAP30P38429 201 aa10.92□□□□□ -0.66
SCEIQ0160 CHL1P22516 861 aaPredicted RBP10.88□□□□□ -0.67
SCEIQ0160 RCR1P38212 213 aa10.87□□□□□ -0.67
SCEIQ0160 DAN4P47179 1161 aa10.82□□□□□ -0.68
SCEIQ0160 ABP1P15891 592 aaKnown RBP10.81□□□□□ -0.68
SCEIQ0160 YDL129WQ07555 291 aa10.8□□□□□ -0.68
SCEIQ0160 PRE3P38624 215 aa10.79□□□□□ -0.68
SCEIQ0160 JIP4Q03361 876 aa10.79□□□□□ -0.68
SCEIQ0160 GYP5Q12344 894 aa10.77□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms