RNA–Protein interactions for RNA: ENST00000640038.1

PAX6-263, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-263ENST00000640038 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.01
PAX6-263ENST00000640038 ABCC9O60706 1549 aa20.36■□□□□ 0.85
PAX6-263ENST00000640038 DNAJC5BQ9UF47 199 aa19.77■□□□□ 0.76
PAX6-263ENST00000640038 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
PAX6-263ENST00000640038 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
PAX6-263ENST00000640038 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
PAX6-263ENST00000640038 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
PAX6-263ENST00000640038 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
PAX6-263ENST00000640038 DCAF8L2P0C7V8 631 aa18.66■□□□□ 0.58
PAX6-263ENST00000640038 NACADO15069 1562 aa18.61■□□□□ 0.57
PAX6-263ENST00000640038 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
PAX6-263ENST00000640038 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
PAX6-263ENST00000640038 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
PAX6-263ENST00000640038 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
PAX6-263ENST00000640038 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
PAX6-263ENST00000640038 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
PAX6-263ENST00000640038 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
PAX6-263ENST00000640038 SHROOM4Q9ULL8 1493 aa17.97■□□□□ 0.47
PAX6-263ENST00000640038 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
PAX6-263ENST00000640038 CUX2O14529 1486 aa17.75■□□□□ 0.43
PAX6-263ENST00000640038 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
PAX6-263ENST00000640038 ERCC6Q03468 1493 aa17.64■□□□□ 0.41
PAX6-263ENST00000640038 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
PAX6-263ENST00000640038 ZCCHC6Q5VYS8 1495 aaKnown RBP17.52■□□□□ 0.4
PAX6-263ENST00000640038 NESP48681 1621 aa17.26■□□□□ 0.35
PAX6-263ENST00000640038 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
PAX6-263ENST00000640038 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
PAX6-263ENST00000640038 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
PAX6-263ENST00000640038 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
PAX6-263ENST00000640038 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
PAX6-263ENST00000640038 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
PAX6-263ENST00000640038 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
PAX6-263ENST00000640038 OSCARQ8IYS5 282 aa16.93■□□□□ 0.3
PAX6-263ENST00000640038 BAZ1AQ9NRL2 1556 aaPredicted RBP16.91■□□□□ 0.3
PAX6-263ENST00000640038 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
PAX6-263ENST00000640038 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
PAX6-263ENST00000640038 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
PAX6-263ENST00000640038 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
PAX6-263ENST00000640038 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
PAX6-263ENST00000640038 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
PAX6-263ENST00000640038 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
PAX6-263ENST00000640038 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
PAX6-263ENST00000640038 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
PAX6-263ENST00000640038 WDR62O43379 1518 aa16.73■□□□□ 0.27
PAX6-263ENST00000640038 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
PAX6-263ENST00000640038 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
PAX6-263ENST00000640038 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
PAX6-263ENST00000640038 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
PAX6-263ENST00000640038 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
PAX6-263ENST00000640038 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
PAX6-263ENST00000640038 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
PAX6-263ENST00000640038 MYT1Q01538 1121 aa16.46■□□□□ 0.23
PAX6-263ENST00000640038 HRCP23327 699 aa16.44■□□□□ 0.22
PAX6-263ENST00000640038 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
PAX6-263ENST00000640038 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
PAX6-263ENST00000640038 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
PAX6-263ENST00000640038 WIZO95785 1651 aa16.31■□□□□ 0.2
PAX6-263ENST00000640038 FBLN2P98095 1184 aa16.31■□□□□ 0.2
PAX6-263ENST00000640038 CFTRP13569 1480 aa16.29■□□□□ 0.2
PAX6-263ENST00000640038 CHD1O14646 1710 aa16.28■□□□□ 0.2
PAX6-263ENST00000640038 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
PAX6-263ENST00000640038 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
PAX6-263ENST00000640038 EIF4G3O43432 1585 aaKnown RBP16.19■□□□□ 0.18
PAX6-263ENST00000640038 ILDR1Q86SU0 546 aaPredicted RBP16.17■□□□□ 0.18
PAX6-263ENST00000640038 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
PAX6-263ENST00000640038 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
PAX6-263ENST00000640038 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
PAX6-263ENST00000640038 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
PAX6-263ENST00000640038 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
PAX6-263ENST00000640038 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
PAX6-263ENST00000640038 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
PAX6-263ENST00000640038 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
PAX6-263ENST00000640038 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
PAX6-263ENST00000640038 CLASP1Q7Z460 1538 aa15.97■□□□□ 0.15
PAX6-263ENST00000640038 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
PAX6-263ENST00000640038 DNMBPQ6XZF7 1577 aa15.95■□□□□ 0.14
PAX6-263ENST00000640038 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
PAX6-263ENST00000640038 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
PAX6-263ENST00000640038 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
PAX6-263ENST00000640038 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
PAX6-263ENST00000640038 POLA1P09884 1462 aaPredicted RBP15.87■□□□□ 0.13
PAX6-263ENST00000640038 SOGA1O94964 1423 aa15.85■□□□□ 0.13
PAX6-263ENST00000640038 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
PAX6-263ENST00000640038 KDM4FA0A1W2PPD8 638 aa15.82■□□□□ 0.12
PAX6-263ENST00000640038 KIF13AQ9H1H9 1805 aa15.8■□□□□ 0.12
PAX6-263ENST00000640038 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
PAX6-263ENST00000640038 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
PAX6-263ENST00000640038 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
PAX6-263ENST00000640038 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
PAX6-263ENST00000640038 WDR97A6NE52 1622 aa15.7■□□□□ 0.1
PAX6-263ENST00000640038 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
PAX6-263ENST00000640038 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
PAX6-263ENST00000640038 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
PAX6-263ENST00000640038 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
PAX6-263ENST00000640038 KDM6BO15054 1643 aa15.62■□□□□ 0.09
PAX6-263ENST00000640038 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
PAX6-263ENST00000640038 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
PAX6-263ENST00000640038 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
PAX6-263ENST00000640038 PPARGC1BQ86YN6 1023 aaKnown RBP15.59■□□□□ 0.09
PAX6-263ENST00000640038 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms