RNA–Protein interactions for RNA: ENST00000639730.1

KCNMA1-270, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-270ENST00000639730 NISCHQ9Y2I1 1504 aa17.28■□□□□ 0.36
KCNMA1-270ENST00000639730 CCDC180Q9P1Z9 1646 aa16.17■□□□□ 0.18
KCNMA1-270ENST00000639730 ABCC9O60706 1549 aa15.21■□□□□ 0.03
KCNMA1-270ENST00000639730 MYO15BQ96JP2 1530 aa15.21■□□□□ 0.02
KCNMA1-270ENST00000639730 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
KCNMA1-270ENST00000639730 NACADO15069 1562 aa15.12■□□□□ 0.01
KCNMA1-270ENST00000639730 SHROOM4Q9ULL8 1493 aa15.09■□□□□ 0.01
KCNMA1-270ENST00000639730 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
KCNMA1-270ENST00000639730 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
KCNMA1-270ENST00000639730 BICRAQ9NZM4 1560 aa14.55□□□□□ -0.08
KCNMA1-270ENST00000639730 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
KCNMA1-270ENST00000639730 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
KCNMA1-270ENST00000639730 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
KCNMA1-270ENST00000639730 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
KCNMA1-270ENST00000639730 CECR2Q9BXF3 1484 aa14□□□□□ -0.17
KCNMA1-270ENST00000639730 CUX2O14529 1486 aa13.96□□□□□ -0.17
KCNMA1-270ENST00000639730 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
KCNMA1-270ENST00000639730 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
KCNMA1-270ENST00000639730 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
KCNMA1-270ENST00000639730 PEG3Q9GZU2 1588 aa13.81□□□□□ -0.2
KCNMA1-270ENST00000639730 NCAPD3P42695 1498 aa13.77□□□□□ -0.2
KCNMA1-270ENST00000639730 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
KCNMA1-270ENST00000639730 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
KCNMA1-270ENST00000639730 DNAJC5Q9H3Z4 198 aa13.62□□□□□ -0.23
KCNMA1-270ENST00000639730 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
KCNMA1-270ENST00000639730 SMARCA4P51532 1647 aa13.58□□□□□ -0.24
KCNMA1-270ENST00000639730 THOC2Q8NI27 1593 aaKnown RBP13.55□□□□□ -0.24
KCNMA1-270ENST00000639730 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
KCNMA1-270ENST00000639730 ATAD2BQ9ULI0 1458 aa13.5□□□□□ -0.25
KCNMA1-270ENST00000639730 PRDM2Q13029 1718 aa13.41□□□□□ -0.26
KCNMA1-270ENST00000639730 WDR62O43379 1518 aa13.36□□□□□ -0.27
KCNMA1-270ENST00000639730 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
KCNMA1-270ENST00000639730 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
KCNMA1-270ENST00000639730 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
KCNMA1-270ENST00000639730 WDR97A6NE52 1622 aa13.26□□□□□ -0.29
KCNMA1-270ENST00000639730 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
KCNMA1-270ENST00000639730 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
KCNMA1-270ENST00000639730 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
KCNMA1-270ENST00000639730 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
KCNMA1-270ENST00000639730 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
KCNMA1-270ENST00000639730 CFTRP13569 1480 aa13.06□□□□□ -0.32
KCNMA1-270ENST00000639730 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
KCNMA1-270ENST00000639730 HRCP23327 699 aa13.03□□□□□ -0.32
KCNMA1-270ENST00000639730 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
KCNMA1-270ENST00000639730 NESP48681 1621 aa13□□□□□ -0.33
KCNMA1-270ENST00000639730 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
KCNMA1-270ENST00000639730 PPARGC1BQ86YN6 1023 aaKnown RBP12.93□□□□□ -0.34
KCNMA1-270ENST00000639730 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
KCNMA1-270ENST00000639730 WIZO95785 1651 aa12.88□□□□□ -0.35
KCNMA1-270ENST00000639730 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-270ENST00000639730 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
KCNMA1-270ENST00000639730 RSF1Q96T23 1441 aaPredicted RBP12.85□□□□□ -0.35
KCNMA1-270ENST00000639730 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
KCNMA1-270ENST00000639730 RIMBP3CA6NJZ7 1639 aa12.82□□□□□ -0.36
KCNMA1-270ENST00000639730 RIMBP3BA6NNM3 1639 aa12.82□□□□□ -0.36
KCNMA1-270ENST00000639730 RIMBP3Q9UFD9 1639 aa12.82□□□□□ -0.36
KCNMA1-270ENST00000639730 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
KCNMA1-270ENST00000639730 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-270ENST00000639730 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-270ENST00000639730 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
KCNMA1-270ENST00000639730 TOPBP1Q92547 1522 aa12.71□□□□□ -0.37
KCNMA1-270ENST00000639730 CHD1O14646 1710 aa12.69□□□□□ -0.38
KCNMA1-270ENST00000639730 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
KCNMA1-270ENST00000639730 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-270ENST00000639730 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
KCNMA1-270ENST00000639730 MAGI1Q96QZ7 1491 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-270ENST00000639730 SYNJ1O43426 1573 aa12.65□□□□□ -0.39
KCNMA1-270ENST00000639730 PBRM1Q86U86 1689 aa12.58□□□□□ -0.4
KCNMA1-270ENST00000639730 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
KCNMA1-270ENST00000639730 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
KCNMA1-270ENST00000639730 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
KCNMA1-270ENST00000639730 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
KCNMA1-270ENST00000639730 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
KCNMA1-270ENST00000639730 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
KCNMA1-270ENST00000639730 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-270ENST00000639730 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-270ENST00000639730 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
KCNMA1-270ENST00000639730 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
KCNMA1-270ENST00000639730 ZNF608Q9ULD9 1512 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-270ENST00000639730 CHIC1Q5VXU3 224 aa12.44□□□□□ -0.42
KCNMA1-270ENST00000639730 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
KCNMA1-270ENST00000639730 ADAMTS12P58397 1594 aa12.41□□□□□ -0.42
KCNMA1-270ENST00000639730 NUP160Q12769 1436 aa12.37□□□□□ -0.43
KCNMA1-270ENST00000639730 CUX1P39880 1505 aa12.35□□□□□ -0.43
KCNMA1-270ENST00000639730 TOP2BQ02880 1626 aa12.35□□□□□ -0.43
KCNMA1-270ENST00000639730 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
KCNMA1-270ENST00000639730 MAPKBP1O60336 1514 aa12.34□□□□□ -0.43
KCNMA1-270ENST00000639730 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
KCNMA1-270ENST00000639730 SOGA1O94964 1423 aa12.33□□□□□ -0.44
KCNMA1-270ENST00000639730 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
KCNMA1-270ENST00000639730 CUL7Q14999 1698 aa12.29□□□□□ -0.44
KCNMA1-270ENST00000639730 KIF13AQ9H1H9 1805 aa12.28□□□□□ -0.44
KCNMA1-270ENST00000639730 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.44
KCNMA1-270ENST00000639730 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
KCNMA1-270ENST00000639730 GLI2P10070 1586 aa12.26□□□□□ -0.45
KCNMA1-270ENST00000639730 CEP170Q5SW79 1584 aa12.25□□□□□ -0.45
KCNMA1-270ENST00000639730 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
KCNMA1-270ENST00000639730 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
KCNMA1-270ENST00000639730 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.45
KCNMA1-270ENST00000639730 RUSC2Q8N2Y8 1516 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms